RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.2■□□□□ 0.5
VRK3-218ENST00000600031 PODXL2Q9NZ53 605 aa18.2■□□□□ 0.5
VRK3-218ENST00000600031 UFL1O94874 794 aa18.2■□□□□ 0.5
VRK3-218ENST00000600031 OLFM4Q6UX06 510 aa18.2■□□□□ 0.5
VRK3-218ENST00000600031 MAP4K1Q92918 833 aa18.2■□□□□ 0.5
VRK3-218ENST00000600031 GGA1Q9UJY5 639 aa18.2■□□□□ 0.5
VRK3-218ENST00000600031 MAST3O60307 1309 aa18.19■□□□□ 0.5
VRK3-218ENST00000600031 M0R2C6 588 aa18.19■□□□□ 0.5
VRK3-218ENST00000600031 ZBTB7AO95365 584 aa18.19■□□□□ 0.5
VRK3-218ENST00000600031 ADD2P35612 726 aa18.19■□□□□ 0.5
VRK3-218ENST00000600031 SLC9C2Q5TAH2 1124 aa18.19■□□□□ 0.5
VRK3-218ENST00000600031 STYK1Q6J9G0 422 aa18.19■□□□□ 0.5
VRK3-218ENST00000600031 POLLQ9UGP5 575 aa18.19■□□□□ 0.5
VRK3-218ENST00000600031 WWC3Q9ULE0 1092 aa18.19■□□□□ 0.5
VRK3-218ENST00000600031 WASHC4Q2M389 1173 aa18.19■□□□□ 0.5
VRK3-218ENST00000600031 C15orf52Q6ZUT6 534 aaKnown RBP18.19■□□□□ 0.5
VRK3-218ENST00000600031 TBC1D16Q8TBP0 767 aa18.19■□□□□ 0.5
VRK3-218ENST00000600031 DENND2AQ9ULE3 1009 aa18.19■□□□□ 0.5
VRK3-218ENST00000600031 CACNA1SQ13698 1873 aa18.18■□□□□ 0.5
VRK3-218ENST00000600031 ZSCAN25Q6NSZ9 544 aa18.18■□□□□ 0.5
VRK3-218ENST00000600031 SPRYD3Q8NCJ5 442 aa18.18■□□□□ 0.5
VRK3-218ENST00000600031 APPBP2Q92624 585 aa18.18■□□□□ 0.5
VRK3-218ENST00000600031 RBM8AQ9Y5S9 174 aaKnown RBP18.18■□□□□ 0.5
VRK3-218ENST00000600031 DOCK2Q92608 1830 aa18.18■□□□□ 0.5
VRK3-218ENST00000600031 LTBP1Q14766 1721 aa18.18■□□□□ 0.5
VRK3-218ENST00000600031 SEMA3EO15041 775 aa18.17■□□□□ 0.5
VRK3-218ENST00000600031 PDE6AP16499 860 aa18.17■□□□□ 0.5
VRK3-218ENST00000600031 ANAPC15P60006 121 aa18.17■□□□□ 0.5
VRK3-218ENST00000600031 R3HDM1Q15032 1099 aaKnown RBP18.17■□□□□ 0.5
VRK3-218ENST00000600031 NECTIN1Q15223 517 aa18.17■□□□□ 0.5
VRK3-218ENST00000600031 RABEP1Q15276 862 aa18.17■□□□□ 0.5
VRK3-218ENST00000600031 PUS7LQ9H0K6 701 aaKnown RBP18.17■□□□□ 0.5
VRK3-218ENST00000600031 C10orf71Q711Q0 1435 aa18.17■□□□□ 0.5
VRK3-218ENST00000600031 TCRBV5S4A2TA0A5A2 114 aa18.17■□□□□ 0.5
VRK3-218ENST00000600031 MAP3K12Q12852 859 aa18.17■□□□□ 0.5
VRK3-218ENST00000600031 RASEFQ8IZ41 740 aa18.17■□□□□ 0.5
VRK3-218ENST00000600031 IL17RAQ96F46 866 aa18.17■□□□□ 0.5
VRK3-218ENST00000600031 ZNF532Q9HCE3 1301 aa18.16■□□□□ 0.5
VRK3-218ENST00000600031 UBE3CQ15386 1083 aa18.16■□□□□ 0.5
VRK3-218ENST00000600031 VPS53Q5VIR6 699 aa18.16■□□□□ 0.5
VRK3-218ENST00000600031 PRPF40BQ6NWY9 871 aaKnown RBP18.16■□□□□ 0.5
VRK3-218ENST00000600031 ATF5Q9Y2D1 282 aaPredicted RBP18.16■□□□□ 0.5
VRK3-218ENST00000600031 C6orf229H3BNL8 230 aa18.16■□□□□ 0.5
VRK3-218ENST00000600031 CD2BP2O95400 341 aaKnown RBP18.16■□□□□ 0.5
VRK3-218ENST00000600031 MAGEB6Q8N7X4 407 aa18.16■□□□□ 0.5
VRK3-218ENST00000600031 LRP2BPQ9P2M1 347 aa18.16■□□□□ 0.5
VRK3-218ENST00000600031 ABCF2Q9UG63 623 aa18.16■□□□□ 0.5
VRK3-218ENST00000600031 CIZ1Q9ULV3 898 aaPredicted RBP18.16■□□□□ 0.5
VRK3-218ENST00000600031 SNX14Q9Y5W7 946 aa18.16■□□□□ 0.5
VRK3-218ENST00000600031 SLX4Q8IY92 1834 aa18.15■□□□□ 0.5
VRK3-218ENST00000600031 MYH13Q9UKX3 1938 aa18.15■□□□□ 0.5
VRK3-218ENST00000600031 FAM43AQ8N2R8 423 aa18.15■□□□□ 0.5
VRK3-218ENST00000600031 MPNDQ8N594 471 aa18.15■□□□□ 0.5
VRK3-218ENST00000600031 ZBTB22O15209 634 aa18.14■□□□□ 0.5
VRK3-218ENST00000600031 DDIT3P35638 169 aa18.14■□□□□ 0.5
VRK3-218ENST00000600031 CREB3L3Q68CJ9 461 aa18.14■□□□□ 0.5
VRK3-218ENST00000600031 ZNF804AQ7Z570 1209 aa18.14■□□□□ 0.5
VRK3-218ENST00000600031 TDRD7Q8NHU6 1098 aaKnown RBP18.14■□□□□ 0.5
VRK3-218ENST00000600031 KCNB2Q92953 911 aa18.14■□□□□ 0.5
VRK3-218ENST00000600031 CNKSR1Q969H4 720 aa18.14■□□□□ 0.5
VRK3-218ENST00000600031 PDS5AQ29RF7 1337 aaKnown RBP18.14■□□□□ 0.49
VRK3-218ENST00000600031 DDX11L8A8MPP1 907 aa18.14■□□□□ 0.49
VRK3-218ENST00000600031 HSPD1P10809 573 aaKnown RBP18.14■□□□□ 0.49
VRK3-218ENST00000600031 CHAF1AQ13111 956 aaPredicted RBP18.14■□□□□ 0.49
VRK3-218ENST00000600031 MTFR1LQ9H019 292 aa18.14■□□□□ 0.49
VRK3-218ENST00000600031 JAG2Q9Y219 1238 aa18.14■□□□□ 0.49
VRK3-218ENST00000600031 SLC27A2O14975 620 aa18.13■□□□□ 0.49
VRK3-218ENST00000600031 GPAA1O43292 621 aa18.13■□□□□ 0.49
VRK3-218ENST00000600031 DUOX1Q9NRD9 1551 aa18.13■□□□□ 0.49
VRK3-218ENST00000600031 DPP8Q6V1X1 898 aaPredicted RBP18.13■□□□□ 0.49
VRK3-218ENST00000600031 DSCC1Q9BVC3 393 aa18.13■□□□□ 0.49
VRK3-218ENST00000600031 TMX4Q9H1E5 349 aaPredicted RBP18.13■□□□□ 0.49
VRK3-218ENST00000600031 CD209Q9NNX6 404 aa18.13■□□□□ 0.49
VRK3-218ENST00000600031 ZNF219Q9P2Y4 722 aaPredicted RBP18.13■□□□□ 0.49
VRK3-218ENST00000600031 FOXP2O15409 715 aa18.12■□□□□ 0.49
VRK3-218ENST00000600031 RAI14Q9P0K7 980 aa18.12■□□□□ 0.49
VRK3-218ENST00000600031 U3KPZ7 1027 aaPredicted RBP18.12■□□□□ 0.49
VRK3-218ENST00000600031 TRAK2O60296 914 aa18.11■□□□□ 0.49
VRK3-218ENST00000600031 C7orf43Q8WVR3 580 aa18.11■□□□□ 0.49
VRK3-218ENST00000600031 TAF6LQ9Y6J9 622 aa18.11■□□□□ 0.49
VRK3-218ENST00000600031 A0A0G2JLW4 131 aa18.11■□□□□ 0.49
VRK3-218ENST00000600031 PSDA5PKW4 1024 aaPredicted RBP18.11■□□□□ 0.49
VRK3-218ENST00000600031 GOLGA6L3A6NEY3 463 aa18.11■□□□□ 0.49
VRK3-218ENST00000600031 RIMBP2O15034 1052 aa18.11■□□□□ 0.49
VRK3-218ENST00000600031 FSD2A1L4K1 749 aa18.1■□□□□ 0.49
VRK3-218ENST00000600031 IL1R1P14778 569 aa18.1■□□□□ 0.49
VRK3-218ENST00000600031 DPEP1P16444 411 aa18.1■□□□□ 0.49
VRK3-218ENST00000600031 KCNA3P22001 575 aa18.1■□□□□ 0.49
VRK3-218ENST00000600031 NEK4P51957 841 aa18.1■□□□□ 0.49
VRK3-218ENST00000600031 ADCK5Q3MIX3 580 aa18.1■□□□□ 0.49
VRK3-218ENST00000600031 ZNF384Q8TF68 577 aa18.1■□□□□ 0.49
VRK3-218ENST00000600031 UPF3BQ9BZI7 483 aaKnown RBP18.1■□□□□ 0.49
VRK3-218ENST00000600031 KIF13BQ9NQT8 1826 aa18.1■□□□□ 0.49
VRK3-218ENST00000600031 GOLGB1Q14789 3259 aaKnown RBP18.1■□□□□ 0.49
VRK3-218ENST00000600031 ZKSCAN1P17029 563 aaPredicted RBP18.1■□□□□ 0.49
VRK3-218ENST00000600031 CYP7A1P22680 504 aa18.1■□□□□ 0.49
VRK3-218ENST00000600031 POLD1P28340 1107 aa18.1■□□□□ 0.49
VRK3-218ENST00000600031 ADGRA1Q86SQ6 560 aa18.1■□□□□ 0.49
VRK3-218ENST00000600031 DLEC1Q9Y238 1755 aa18.09■□□□□ 0.49
VRK3-218ENST00000600031 PRDX5P30044 214 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms