RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 ANGEL1Q9UNK9 670 aaKnown RBP26.88■■□□□ 1.89
PNKP-212ENST00000599454 HPS5Q9UPZ3 1129 aa26.88■■□□□ 1.89
PNKP-212ENST00000599454 GPR25O00155 361 aa26.87■■□□□ 1.89
PNKP-212ENST00000599454 MYO1BO43795 1136 aa26.87■■□□□ 1.89
PNKP-212ENST00000599454 CERS5Q8N5B7 392 aa26.87■■□□□ 1.89
PNKP-212ENST00000599454 HELBQ8NG08 1087 aaPredicted RBP26.87■■□□□ 1.89
PNKP-212ENST00000599454 TNRC18O15417 2968 aaPredicted RBP26.86■■□□□ 1.89
PNKP-212ENST00000599454 F6X3S4 739 aa26.86■■□□□ 1.89
PNKP-212ENST00000599454 MKRN3Q13064 507 aaKnown RBP26.86■■□□□ 1.89
PNKP-212ENST00000599454 PRKG1Q13976 671 aa26.86■■□□□ 1.89
PNKP-212ENST00000599454 MAP3K11Q16584 847 aa26.86■■□□□ 1.89
PNKP-212ENST00000599454 CCDC57Q2TAC2 916 aa26.86■■□□□ 1.89
PNKP-212ENST00000599454 SPRYD7Q5W111 196 aa26.86■■□□□ 1.89
PNKP-212ENST00000599454 UNCXA6NJT0 531 aa26.85■■□□□ 1.89
PNKP-212ENST00000599454 SNAP23O00161 211 aa26.85■■□□□ 1.89
PNKP-212ENST00000599454 ALDH1A1P00352 501 aa26.85■■□□□ 1.89
PNKP-212ENST00000599454 LMBR1LQ6UX01 489 aa26.85■■□□□ 1.89
PNKP-212ENST00000599454 GRM8O00222 908 aa26.84■■□□□ 1.89
PNKP-212ENST00000599454 PPP1R12BO60237 982 aaPredicted RBP26.84■■□□□ 1.89
PNKP-212ENST00000599454 INHBEP58166 350 aa26.84■■□□□ 1.89
PNKP-212ENST00000599454 TAF7LQ5H9L4 462 aa26.84■■□□□ 1.89
PNKP-212ENST00000599454 ARAP2Q8WZ64 1704 aa26.84■■□□□ 1.89
PNKP-212ENST00000599454 MANSC4A6NHS7 340 aaPredicted RBP26.83■■□□□ 1.89
PNKP-212ENST00000599454 CFAP100Q494V2 611 aa26.83■■□□□ 1.89
PNKP-212ENST00000599454 LDHAL6AQ6ZMR3 332 aa26.83■■□□□ 1.89
PNKP-212ENST00000599454 SALL2Q9Y467 1007 aaPredicted RBP26.83■■□□□ 1.89
PNKP-212ENST00000599454 SPDYE2BA6NHP3 402 aa26.82■■□□□ 1.88
PNKP-212ENST00000599454 ANP32CO43423 234 aa26.82■■□□□ 1.88
PNKP-212ENST00000599454 FKTNO75072 461 aa26.82■■□□□ 1.88
PNKP-212ENST00000599454 SPDYE6P0CI01 402 aa26.82■■□□□ 1.88
PNKP-212ENST00000599454 ZBTB48P10074 688 aaPredicted RBP26.82■■□□□ 1.88
PNKP-212ENST00000599454 SUPT20HL1Q3ZLR7 823 aa26.82■■□□□ 1.88
PNKP-212ENST00000599454 SLC10A4Q96EP9 437 aa26.82■■□□□ 1.88
PNKP-212ENST00000599454 CNNM1Q9NRU3 951 aa26.82■■□□□ 1.88
PNKP-212ENST00000599454 C9orf78Q9NZ63 289 aaPredicted RBP26.82■■□□□ 1.88
PNKP-212ENST00000599454 SSC5DA1L4H1 1573 aa26.81■■□□□ 1.88
PNKP-212ENST00000599454 ALDH1L1O75891 902 aa26.81■■□□□ 1.88
PNKP-212ENST00000599454 EPHA10Q5JZY3 1008 aa26.81■■□□□ 1.88
PNKP-212ENST00000599454 FBXO46Q6PJ61 603 aaPredicted RBP26.81■■□□□ 1.88
PNKP-212ENST00000599454 F8W031 263 aaPredicted RBP26.8■■□□□ 1.88
PNKP-212ENST00000599454 FAM205AQ6ZU69 1335 aa26.8■■□□□ 1.88
PNKP-212ENST00000599454 ZNF594Q96JF6 807 aaPredicted RBP26.79■■□□□ 1.88
PNKP-212ENST00000599454 PRMT6Q96LA8 375 aaPredicted RBP26.79■■□□□ 1.88
PNKP-212ENST00000599454 PLIN1O60240 522 aa26.78■■□□□ 1.88
PNKP-212ENST00000599454 UBE4AQ14139 1066 aa26.78■■□□□ 1.88
PNKP-212ENST00000599454 WNK4Q96J92 1243 aa26.78■■□□□ 1.88
PNKP-212ENST00000599454 VEZTQ9HBM0 779 aa26.78■■□□□ 1.88
PNKP-212ENST00000599454 PCDHAC2Q9Y5I4 1007 aa26.78■■□□□ 1.88
PNKP-212ENST00000599454 OTOFQ9HC10 1997 aa26.77■■□□□ 1.88
PNKP-212ENST00000599454 CLRN2A0PK11 232 aa26.77■■□□□ 1.88
PNKP-212ENST00000599454 IFNL1Q8IU54 200 aa26.77■■□□□ 1.88
PNKP-212ENST00000599454 SRCIN1Q9C0H9 1055 aa26.77■■□□□ 1.88
PNKP-212ENST00000599454 SPINK5Q9NQ38 1064 aaPredicted RBP26.77■■□□□ 1.88
PNKP-212ENST00000599454 FZD1Q9UP38 647 aa26.77■■□□□ 1.88
PNKP-212ENST00000599454 IREB2P48200 963 aaKnown RBP26.76■■□□□ 1.87
PNKP-212ENST00000599454 RBM5P52756 815 aaKnown RBP eCLIP26.76■■□□□ 1.87
PNKP-212ENST00000599454 TNFAIP1Q13829 316 aa26.76■■□□□ 1.87
PNKP-212ENST00000599454 TDRD7Q8NHU6 1098 aaKnown RBP26.76■■□□□ 1.87
PNKP-212ENST00000599454 R3HDMLQ9H3Y0 253 aa26.75■■□□□ 1.87
PNKP-212ENST00000599454 SERPINA10Q9UK55 444 aa26.75■■□□□ 1.87
PNKP-212ENST00000599454 JAG2Q9Y219 1238 aa26.75■■□□□ 1.87
PNKP-212ENST00000599454 HIBADHP31937 336 aaKnown RBP26.74■■□□□ 1.87
PNKP-212ENST00000599454 MFSD14BQ5SR56 506 aa26.74■■□□□ 1.87
PNKP-212ENST00000599454 NBPF12Q5TAG4 269 aaPredicted RBP26.74■■□□□ 1.87
PNKP-212ENST00000599454 SLC4A10Q6U841 1118 aa26.74■■□□□ 1.87
PNKP-212ENST00000599454 CLMNQ96JQ2 1002 aa26.74■■□□□ 1.87
PNKP-212ENST00000599454 RASA3Q14644 834 aa26.73■■□□□ 1.87
PNKP-212ENST00000599454 OTUD7BQ6GQQ9 843 aa26.73■■□□□ 1.87
PNKP-212ENST00000599454 ANKRD13AQ8IZ07 590 aa26.73■■□□□ 1.87
PNKP-212ENST00000599454 SPDYE2Q495Y8 402 aa26.72■■□□□ 1.87
PNKP-212ENST00000599454 TTF2Q9UNY4 1162 aaKnown RBP26.72■■□□□ 1.87
PNKP-212ENST00000599454 AOX1Q06278 1338 aa26.71■■□□□ 1.87
PNKP-212ENST00000599454 MROH5Q6ZUA9 1318 aa26.71■■□□□ 1.87
PNKP-212ENST00000599454 USP2O75604 605 aaPredicted RBP26.71■■□□□ 1.87
PNKP-212ENST00000599454 PRPF38BQ5VTL8 546 aaKnown RBP26.71■■□□□ 1.87
PNKP-212ENST00000599454 SUCLG2Q96I99 432 aa26.71■■□□□ 1.87
PNKP-212ENST00000599454 FAM84BQ96KN1 310 aaPredicted RBP26.71■■□□□ 1.87
PNKP-212ENST00000599454 UTYO14607 1347 aa26.7■■□□□ 1.87
PNKP-212ENST00000599454 IGF2BP3O00425 579 aaKnown RBP eCLIP26.7■■□□□ 1.86
PNKP-212ENST00000599454 GYG1P46976 350 aa26.7■■□□□ 1.86
PNKP-212ENST00000599454 ZNF70Q9UC06 446 aaPredicted RBP26.7■■□□□ 1.86
PNKP-212ENST00000599454 KAZALD1Q96I82 304 aa26.69■■□□□ 1.86
PNKP-212ENST00000599454 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.69■■□□□ 1.86
PNKP-212ENST00000599454 RIPOR2Q9Y4F9 1068 aa26.69■■□□□ 1.86
PNKP-212ENST00000599454 KIAA0100Q14667 2235 aaKnown RBP26.68■■□□□ 1.86
PNKP-212ENST00000599454 ERO1AQ96HE7 468 aa26.68■■□□□ 1.86
PNKP-212ENST00000599454 PUS3Q9BZE2 481 aaKnown RBP26.68■■□□□ 1.86
PNKP-212ENST00000599454 RBBP6Q7Z6E9 1792 aaKnown RBP26.68■■□□□ 1.86
PNKP-212ENST00000599454 MYH13Q9UKX3 1938 aa26.67■■□□□ 1.86
PNKP-212ENST00000599454 TESPA1A2RU30 521 aaPredicted RBP26.67■■□□□ 1.86
PNKP-212ENST00000599454 NBPF7P0C2Y1 421 aaPredicted RBP26.67■■□□□ 1.86
PNKP-212ENST00000599454 TNNI2P48788 182 aa26.67■■□□□ 1.86
PNKP-212ENST00000599454 DZIP1LQ8IYY4 767 aaKnown RBP26.67■■□□□ 1.86
PNKP-212ENST00000599454 TDRD3Q9H7E2 651 aaKnown RBP26.67■■□□□ 1.86
PNKP-212ENST00000599454 TRIM17Q9Y577 477 aa26.67■■□□□ 1.86
PNKP-212ENST00000599454 GJA5P36382 358 aa26.66■■□□□ 1.86
PNKP-212ENST00000599454 RABL6Q3YEC7 729 aaPredicted RBP26.66■■□□□ 1.86
PNKP-212ENST00000599454 OTOP1Q7RTM1 612 aa26.66■■□□□ 1.86
PNKP-212ENST00000599454 VPS37DQ86XT2 251 aa26.66■■□□□ 1.86
PNKP-212ENST00000599454 TBC1D22AQ8WUA7 517 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms