RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 PUM3Q15397 648 aaKnown RBP28.17■■■□□ 2.1
CCDC9-204ENST00000599398 TMEM57Q8N5G2 664 aa28.17■■■□□ 2.1
CCDC9-204ENST00000599398 TDRD7Q8NHU6 1098 aaKnown RBP28.17■■■□□ 2.1
CCDC9-204ENST00000599398 IFIT1P09914 478 aaKnown RBP28.16■■■□□ 2.1
CCDC9-204ENST00000599398 FTSJ3Q8IY81 847 aaKnown RBP28.16■■■□□ 2.1
CCDC9-204ENST00000599398 WNT10BO00744 389 aa28.15■■■□□ 2.1
CCDC9-204ENST00000599398 FRAT2O75474 233 aaPredicted RBP28.15■■■□□ 2.1
CCDC9-204ENST00000599398 HSPA1AP0DMV8 641 aaKnown RBP28.15■■■□□ 2.1
CCDC9-204ENST00000599398 HSPA1BP0DMV9 641 aaKnown RBP28.15■■■□□ 2.1
CCDC9-204ENST00000599398 FKBP1AP62942 108 aaKnown RBP28.15■■■□□ 2.1
CCDC9-204ENST00000599398 ATG9AQ7Z3C6 839 aa28.15■■■□□ 2.1
CCDC9-204ENST00000599398 SAPCD2Q86UD0 394 aa28.15■■■□□ 2.1
CCDC9-204ENST00000599398 FBXO3Q9UK99 471 aa28.15■■■□□ 2.1
CCDC9-204ENST00000599398 IQSEC3Q9UPP2 1182 aaPredicted RBP28.15■■■□□ 2.1
CCDC9-204ENST00000599398 PA2G4Q9UQ80 394 aaKnown RBP28.15■■■□□ 2.1
CCDC9-204ENST00000599398 PITPNM2Q9BZ72 1349 aa28.15■■■□□ 2.1
CCDC9-204ENST00000599398 WDR33Q9C0J8 1336 aaKnown RBP28.15■■■□□ 2.1
CCDC9-204ENST00000599398 CIAO1O76071 339 aa28.14■■■□□ 2.1
CCDC9-204ENST00000599398 CYP4F22Q6NT55 531 aa28.14■■■□□ 2.1
CCDC9-204ENST00000599398 FBXO33Q7Z6M2 555 aa28.14■■■□□ 2.1
CCDC9-204ENST00000599398 CAPNS2Q96L46 248 aa28.14■■■□□ 2.1
CCDC9-204ENST00000599398 SCAF8Q9UPN6 1271 aaKnown RBP28.14■■■□□ 2.1
CCDC9-204ENST00000599398 FAM205AQ6ZU69 1335 aa28.14■■■□□ 2.09
CCDC9-204ENST00000599398 SRGAP3O43295 1099 aa28.13■■■□□ 2.09
CCDC9-204ENST00000599398 GNAI2P04899 355 aa28.13■■■□□ 2.09
CCDC9-204ENST00000599398 SLC5A1P13866 664 aa28.13■■■□□ 2.09
CCDC9-204ENST00000599398 ECE1P42892 770 aa28.13■■■□□ 2.09
CCDC9-204ENST00000599398 MFSD14BQ5SR56 506 aa28.13■■■□□ 2.09
CCDC9-204ENST00000599398 CDCA5Q96FF9 252 aa28.13■■■□□ 2.09
CCDC9-204ENST00000599398 CEP126Q9P2H0 1117 aa28.13■■■□□ 2.09
CCDC9-204ENST00000599398 FGFR2P21802 821 aa28.12■■■□□ 2.09
CCDC9-204ENST00000599398 BCAMP50895 628 aa28.12■■■□□ 2.09
CCDC9-204ENST00000599398 DLGAP5Q15398 846 aa28.12■■■□□ 2.09
CCDC9-204ENST00000599398 DZIP1LQ8IYY4 767 aaKnown RBP28.12■■■□□ 2.09
CCDC9-204ENST00000599398 GBA2Q9HCG7 927 aaPredicted RBP28.12■■■□□ 2.09
CCDC9-204ENST00000599398 IL15P40933 162 aaPredicted RBP28.11■■■□□ 2.09
CCDC9-204ENST00000599398 CHAF1AQ13111 956 aaPredicted RBP28.11■■■□□ 2.09
CCDC9-204ENST00000599398 C2orf69Q8N8R5 385 aa28.11■■■□□ 2.09
CCDC9-204ENST00000599398 LPIN2Q92539 896 aa28.11■■■□□ 2.09
CCDC9-204ENST00000599398 COPRSQ9NQ92 184 aa28.11■■■□□ 2.09
CCDC9-204ENST00000599398 HUNKP57058 714 aa28.1■■■□□ 2.09
CCDC9-204ENST00000599398 RBM5P52756 815 aaKnown RBP eCLIP28.09■■■□□ 2.09
CCDC9-204ENST00000599398 MTX1Q13505 466 aa28.09■■■□□ 2.09
CCDC9-204ENST00000599398 ATP2B3Q16720 1220 aa28.09■■■□□ 2.09
CCDC9-204ENST00000599398 ITPRIPQ8IWB1 547 aa28.09■■■□□ 2.09
CCDC9-204ENST00000599398 CFAP100Q494V2 611 aa28.08■■■□□ 2.09
CCDC9-204ENST00000599398 ZBED3Q96IU2 234 aaPredicted RBP28.08■■■□□ 2.09
CCDC9-204ENST00000599398 HHIPL1Q96JK4 782 aa28.08■■■□□ 2.09
CCDC9-204ENST00000599398 ARAP2Q8WZ64 1704 aa28.07■■■□□ 2.08
CCDC9-204ENST00000599398 TTF2Q9UNY4 1162 aaKnown RBP28.07■■■□□ 2.08
CCDC9-204ENST00000599398 PCDHAC2Q9Y5I4 1007 aa28.07■■■□□ 2.08
CCDC9-204ENST00000599398 RLBP1P12271 317 aa28.06■■■□□ 2.08
CCDC9-204ENST00000599398 PRAMEF18Q5VWM3 479 aa28.06■■■□□ 2.08
CCDC9-204ENST00000599398 APOBEC3FQ8IUX4 373 aaKnown RBP28.06■■■□□ 2.08
CCDC9-204ENST00000599398 MTMR14Q8NCE2 650 aa28.06■■■□□ 2.08
CCDC9-204ENST00000599398 MYH13Q9UKX3 1938 aa28.06■■■□□ 2.08
CCDC9-204ENST00000599398 MYO1BO43795 1136 aa28.05■■■□□ 2.08
CCDC9-204ENST00000599398 TBC1D22AQ8WUA7 517 aa28.05■■■□□ 2.08
CCDC9-204ENST00000599398 AIDAQ96BJ3 306 aa28.05■■■□□ 2.08
CCDC9-204ENST00000599398 ECM29Q5VYK3 1845 aa28.04■■■□□ 2.08
CCDC9-204ENST00000599398 SPDYE2BA6NHP3 402 aa28.04■■■□□ 2.08
CCDC9-204ENST00000599398 AOC2O75106 756 aa28.04■■■□□ 2.08
CCDC9-204ENST00000599398 SPDYE6P0CI01 402 aa28.04■■■□□ 2.08
CCDC9-204ENST00000599398 PNMA6EA0A0J9YXQ4 647 aa28.03■■■□□ 2.08
CCDC9-204ENST00000599398 MAP2K1Q02750 393 aaPredicted RBP28.03■■■□□ 2.08
CCDC9-204ENST00000599398 PRMT6Q96LA8 375 aaPredicted RBP28.03■■■□□ 2.08
CCDC9-204ENST00000599398 CLRN2A0PK11 232 aa28.02■■■□□ 2.08
CCDC9-204ENST00000599398 C1orf115Q9H7X2 142 aa28.02■■■□□ 2.08
CCDC9-204ENST00000599398 SERPINA10Q9UK55 444 aa28.02■■■□□ 2.08
CCDC9-204ENST00000599398 NF2P35240 595 aa28.01■■■□□ 2.07
CCDC9-204ENST00000599398 RGMBQ6NW40 437 aa28.01■■■□□ 2.07
CCDC9-204ENST00000599398 PANK1Q8TE04 598 aa28.01■■■□□ 2.07
CCDC9-204ENST00000599398 VEZTQ9HBM0 779 aa28.01■■■□□ 2.07
CCDC9-204ENST00000599398 GNL3LQ9NVN8 582 aaKnown RBP28.01■■■□□ 2.07
CCDC9-204ENST00000599398 WBP1LQ9NX94 342 aa28.01■■■□□ 2.07
CCDC9-204ENST00000599398 THSD7BQ9C0I4 1608 aa28■■■□□ 2.07
CCDC9-204ENST00000599398 FOXN1O15353 648 aa28■■■□□ 2.07
CCDC9-204ENST00000599398 TFCP2Q12800 502 aa28■■■□□ 2.07
CCDC9-204ENST00000599398 TTLL12Q14166 644 aaPredicted RBP28■■■□□ 2.07
CCDC9-204ENST00000599398 GRIK5Q16478 980 aa28■■■□□ 2.07
CCDC9-204ENST00000599398 PAPPA2Q9BXP8 1791 aa27.99■■■□□ 2.07
CCDC9-204ENST00000599398 MAP2K2P36507 400 aa27.99■■■□□ 2.07
CCDC9-204ENST00000599398 CRKP46108 304 aa27.99■■■□□ 2.07
CCDC9-204ENST00000599398 ZNF157P51786 506 aaPredicted RBP27.99■■■□□ 2.07
CCDC9-204ENST00000599398 FKBP1BP68106 108 aa27.99■■■□□ 2.07
CCDC9-204ENST00000599398 G3BP1Q13283 466 aaKnown RBP eCLIP27.99■■■□□ 2.07
CCDC9-204ENST00000599398 AKAP2Q9Y2D5 859 aa27.99■■■□□ 2.07
CCDC9-204ENST00000599398 AOX1Q06278 1338 aa27.98■■■□□ 2.07
CCDC9-204ENST00000599398 ZBTB7BO15156 539 aaPredicted RBP27.98■■■□□ 2.07
CCDC9-204ENST00000599398 MS4A1P11836 297 aa27.98■■■□□ 2.07
CCDC9-204ENST00000599398 ADORA1P30542 326 aa27.98■■■□□ 2.07
CCDC9-204ENST00000599398 WDR66Q8TBY9 1149 aa27.98■■■□□ 2.07
CCDC9-204ENST00000599398 BEGAINQ9BUH8 593 aa27.98■■■□□ 2.07
CCDC9-204ENST00000599398 DEFB129Q9H1M3 183 aa27.98■■■□□ 2.07
CCDC9-204ENST00000599398 RCAN3Q9UKA8 241 aa27.98■■■□□ 2.07
CCDC9-204ENST00000599398 PHKA1P46020 1223 aa27.97■■■□□ 2.07
CCDC9-204ENST00000599398 TIMM10P62072 90 aa27.97■■■□□ 2.07
CCDC9-204ENST00000599398 MOB2Q70IA6 237 aa27.97■■■□□ 2.07
CCDC9-204ENST00000599398 COL1A1P02452 1464 aaPredicted RBP27.96■■■□□ 2.07
CCDC9-204ENST00000599398 ATP8B2P98198 1209 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms