RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 PITPNM2Q9BZ72 1349 aa15.23■□□□□ 0.03
LIG1-217ENST00000599165 METTL24Q5JXM2 366 aa15.23■□□□□ 0.03
LIG1-217ENST00000599165 CDCA5Q96FF9 252 aa15.23■□□□□ 0.03
LIG1-217ENST00000599165 CAPNS2Q96L46 248 aa15.23■□□□□ 0.03
LIG1-217ENST00000599165 MYH13Q9UKX3 1938 aa15.23■□□□□ 0.03
LIG1-217ENST00000599165 COL1A1P02452 1464 aaPredicted RBP15.22■□□□□ 0.03
LIG1-217ENST00000599165 HIBADHP31937 336 aaKnown RBP15.22■□□□□ 0.03
LIG1-217ENST00000599165 FKBP1AP62942 108 aaKnown RBP15.22■□□□□ 0.03
LIG1-217ENST00000599165 GRIK5Q16478 980 aa15.22■□□□□ 0.03
LIG1-217ENST00000599165 FRAT1Q92837 279 aaPredicted RBP15.22■□□□□ 0.03
LIG1-217ENST00000599165 HHIPL1Q96JK4 782 aa15.22■□□□□ 0.03
LIG1-217ENST00000599165 WBP1LQ9NX94 342 aa15.22■□□□□ 0.03
LIG1-217ENST00000599165 PA2G4Q9UQ80 394 aaKnown RBP15.22■□□□□ 0.03
LIG1-217ENST00000599165 PAPPA2Q9BXP8 1791 aa15.21■□□□□ 0.03
LIG1-217ENST00000599165 FOXN1O15353 648 aa15.21■□□□□ 0.03
LIG1-217ENST00000599165 AOC2O75106 756 aa15.21■□□□□ 0.03
LIG1-217ENST00000599165 COL13A1Q5TAT6 717 aaPredicted RBP15.21■□□□□ 0.03
LIG1-217ENST00000599165 SULF1Q8IWU6 871 aa15.21■□□□□ 0.03
LIG1-217ENST00000599165 CLUAP1Q96AJ1 413 aa15.21■□□□□ 0.03
LIG1-217ENST00000599165 ZIC5Q96T25 663 aa15.21■□□□□ 0.03
LIG1-217ENST00000599165 CIAO1O76071 339 aa15.2■□□□□ 0.02
LIG1-217ENST00000599165 RLBP1P12271 317 aa15.2■□□□□ 0.02
LIG1-217ENST00000599165 MTX1Q13505 466 aa15.2■□□□□ 0.02
LIG1-217ENST00000599165 PRAMEF18Q5VWM3 479 aa15.2■□□□□ 0.02
LIG1-217ENST00000599165 OGFOD1Q8N543 542 aa15.2■□□□□ 0.02
LIG1-217ENST00000599165 TMEM57Q8N5G2 664 aa15.2■□□□□ 0.02
LIG1-217ENST00000599165 MTMR14Q8NCE2 650 aa15.2■□□□□ 0.02
LIG1-217ENST00000599165 SIL1Q9H173 461 aa15.2■□□□□ 0.02
LIG1-217ENST00000599165 GBA2Q9HCG7 927 aaPredicted RBP15.2■□□□□ 0.02
LIG1-217ENST00000599165 IQSEC3Q9UPP2 1182 aaPredicted RBP15.2■□□□□ 0.02
LIG1-217ENST00000599165 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.2■□□□□ 0.02
LIG1-217ENST00000599165 FAM155AB1AL88 458 aaPredicted RBP15.19■□□□□ 0.02
LIG1-217ENST00000599165 F8W031 263 aaPredicted RBP15.19■□□□□ 0.02
LIG1-217ENST00000599165 IPO8O15397 1037 aaKnown RBP15.19■□□□□ 0.02
LIG1-217ENST00000599165 MMP14P50281 582 aa15.19■□□□□ 0.02
LIG1-217ENST00000599165 BCAMP50895 628 aa15.19■□□□□ 0.02
LIG1-217ENST00000599165 PUM3Q15397 648 aaKnown RBP15.19■□□□□ 0.02
LIG1-217ENST00000599165 COPRSQ9NQ92 184 aa15.19■□□□□ 0.02
LIG1-217ENST00000599165 SSC5DA1L4H1 1573 aa15.19■□□□□ 0.02
LIG1-217ENST00000599165 HUNKP57058 714 aa15.18■□□□□ 0.02
LIG1-217ENST00000599165 MFSD14BQ5SR56 506 aa15.18■□□□□ 0.02
LIG1-217ENST00000599165 ZKSCAN2Q63HK3 967 aa15.18■□□□□ 0.02
LIG1-217ENST00000599165 MOB2Q70IA6 237 aa15.18■□□□□ 0.02
LIG1-217ENST00000599165 PRMT6Q96LA8 375 aaPredicted RBP15.18■□□□□ 0.02
LIG1-217ENST00000599165 FBXO3Q9UK99 471 aa15.18■□□□□ 0.02
LIG1-217ENST00000599165 SPDYE2BA6NHP3 402 aa15.17■□□□□ 0.02
LIG1-217ENST00000599165 GNAI3P08754 354 aa15.17■□□□□ 0.02
LIG1-217ENST00000599165 SPDYE6P0CI01 402 aa15.17■□□□□ 0.02
LIG1-217ENST00000599165 ECE1P42892 770 aa15.17■□□□□ 0.02
LIG1-217ENST00000599165 GRM1Q13255 1194 aa15.17■□□□□ 0.02
LIG1-217ENST00000599165 CFAP100Q494V2 611 aa15.17■□□□□ 0.02
LIG1-217ENST00000599165 PAXIP1Q6ZW49 1069 aaPredicted RBP15.17■□□□□ 0.02
LIG1-217ENST00000599165 HDAC9Q9UKV0 1011 aa15.17■□□□□ 0.02
LIG1-217ENST00000599165 PNMA6EA0A0J9YXQ4 647 aa15.16■□□□□ 0.02
LIG1-217ENST00000599165 LPIN2Q92539 896 aa15.16■□□□□ 0.02
LIG1-217ENST00000599165 SRGAP3O43295 1099 aa15.15■□□□□ 0.02
LIG1-217ENST00000599165 HSPA8P11142 646 aaKnown RBP15.15■□□□□ 0.02
LIG1-217ENST00000599165 MAP2K2P36507 400 aa15.15■□□□□ 0.02
LIG1-217ENST00000599165 IL15P40933 162 aaPredicted RBP15.15■□□□□ 0.02
LIG1-217ENST00000599165 DLGAP5Q15398 846 aa15.15■□□□□ 0.02
LIG1-217ENST00000599165 RGMBQ6NW40 437 aa15.15■□□□□ 0.02
LIG1-217ENST00000599165 C2orf69Q8N8R5 385 aa15.15■□□□□ 0.02
LIG1-217ENST00000599165 TTF2Q9UNY4 1162 aaKnown RBP15.15■□□□□ 0.02
LIG1-217ENST00000599165 CLRN2A0PK11 232 aa15.14■□□□□ 0.01
LIG1-217ENST00000599165 GNAI2P04899 355 aa15.14■□□□□ 0.01
LIG1-217ENST00000599165 IFIT1P09914 478 aaKnown RBP15.14■□□□□ 0.01
LIG1-217ENST00000599165 SLC5A1P13866 664 aa15.14■□□□□ 0.01
LIG1-217ENST00000599165 ADORA1P30542 326 aa15.14■□□□□ 0.01
LIG1-217ENST00000599165 CHAF1AQ13111 956 aaPredicted RBP15.14■□□□□ 0.01
LIG1-217ENST00000599165 ATP2B3Q16720 1220 aa15.14■□□□□ 0.01
LIG1-217ENST00000599165 CAVIN4Q5BKX8 364 aa15.14■□□□□ 0.01
LIG1-217ENST00000599165 APOBEC3FQ8IUX4 373 aaKnown RBP15.14■□□□□ 0.01
LIG1-217ENST00000599165 HDAC5Q9UQL6 1122 aa15.14■□□□□ 0.01
LIG1-217ENST00000599165 OTOFQ9HC10 1997 aa15.13■□□□□ 0.01
LIG1-217ENST00000599165 ZBTB7BO15156 539 aaPredicted RBP15.13■□□□□ 0.01
LIG1-217ENST00000599165 SLC10A3P09131 477 aa15.13■□□□□ 0.01
LIG1-217ENST00000599165 FKBP1BP68106 108 aa15.13■□□□□ 0.01
LIG1-217ENST00000599165 MAP2K1Q02750 393 aaPredicted RBP15.13■□□□□ 0.01
LIG1-217ENST00000599165 VPS37DQ86XT2 251 aa15.13■□□□□ 0.01
LIG1-217ENST00000599165 RASAL3Q86YV0 1011 aa15.13■□□□□ 0.01
LIG1-217ENST00000599165 DEFB129Q9H1M3 183 aa15.13■□□□□ 0.01
LIG1-217ENST00000599165 CEP126Q9P2H0 1117 aa15.13■□□□□ 0.01
LIG1-217ENST00000599165 SERPINA10Q9UK55 444 aa15.13■□□□□ 0.01
LIG1-217ENST00000599165 FZD1Q9UP38 647 aa15.13■□□□□ 0.01
LIG1-217ENST00000599165 LAMB1P07942 1786 aa15.12■□□□□ 0.01
LIG1-217ENST00000599165 UBE2Q2LH0YL09 131 aa15.12■□□□□ 0.01
LIG1-217ENST00000599165 ZBTB22O15209 634 aa15.12■□□□□ 0.01
LIG1-217ENST00000599165 PHKA1P46020 1223 aa15.12■□□□□ 0.01
LIG1-217ENST00000599165 CRKP46108 304 aa15.12■□□□□ 0.01
LIG1-217ENST00000599165 LBX1P52954 281 aa15.12■□□□□ 0.01
LIG1-217ENST00000599165 TFCP2Q12800 502 aa15.12■□□□□ 0.01
LIG1-217ENST00000599165 POLA2Q14181 598 aa15.12■□□□□ 0.01
LIG1-217ENST00000599165 SPDYE2Q495Y8 402 aa15.12■□□□□ 0.01
LIG1-217ENST00000599165 IFFO2Q5TF58 517 aa15.12■□□□□ 0.01
LIG1-217ENST00000599165 CDAN1Q8IWY9 1227 aa15.12■□□□□ 0.01
LIG1-217ENST00000599165 DZIP1LQ8IYY4 767 aaKnown RBP15.12■□□□□ 0.01
LIG1-217ENST00000599165 C1orf115Q9H7X2 142 aa15.12■□□□□ 0.01
LIG1-217ENST00000599165 CTCFP49711 727 aaPredicted RBP15.11■□□□□ 0.01
LIG1-217ENST00000599165 ZNF157P51786 506 aaPredicted RBP15.11■□□□□ 0.01
LIG1-217ENST00000599165 TIMM10P62072 90 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms