RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	ADAMTS8	Q9UP79	889 aa		10.63	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	AKAP2	Q9Y2D5	859 aa		10.63	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	AFF1	P51825	1210 aa	Known RBP	10.62	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	ZNF576	Q9H609	170 aa		10.62	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	LILRB5	O75023	590 aa		10.61	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	ST13	P50502	369 aa	Known RBP	10.61	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	ANKRD24	Q8TF21	1146 aa		10.61	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	ZFYVE1	Q9HBF4	777 aa		10.61	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.61	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	PPM1H	Q9ULR3	514 aa		10.61	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	AMPD1	P23109	780 aa		10.6	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	CDC27	P30260	824 aa		10.6	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	BAG6	P46379	1132 aa		10.6	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	FANCC	Q00597	558 aa		10.6	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	VN1R5	Q7Z5H4	357 aa		10.6	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	CACTIN-AS1	Q8N1I8	211 aa		10.6	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	PRDM6	Q9NQX0	595 aa		10.6	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	METTL5	Q9NRN9	209 aa	Known RBP	10.6	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	TTF2	Q9UNY4	1162 aa	Known RBP	10.6	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	HOXB4	P17483	251 aa	Predicted RBP	10.59	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	HDLBP	Q00341	1268 aa	Known RBP	10.59	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	MAP3K10	Q02779	954 aa		10.59	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	10.59	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	CLEC4M	Q9H2X3	399 aa	Predicted RBP	10.59	□□□□□ -0.71
SOX2-OT-231	ENST00000599082	EPHA1	P21709	976 aa		10.58	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	ZNF76	P36508	570 aa		10.58	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	FAAP100	Q0VG06	881 aa		10.58	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	SVOP	Q8N4V2	548 aa		10.58	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	IL22RA1	Q8N6P7	574 aa		10.58	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	FBXO24	O75426	580 aa		10.57	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	DGKG	P49619	791 aa		10.57	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	COL9A3	Q14050	684 aa	Predicted RBP	10.57	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	FAM177B	A6PVY3	158 aa		10.56	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	PCDH1	Q08174	1060 aa		10.56	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	ZNF423	Q2M1K9	1284 aa		10.56	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	GPAT2	Q6NUI2	795 aa		10.56	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	TPTE2	Q6XPS3	522 aa		10.56	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	METTL16	Q86W50	562 aa	Known RBP	10.56	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	RNF34	Q969K3	372 aa		10.56	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	SEC31B	Q9NQW1	1179 aa		10.56	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	ARHGEF15	O94989	841 aa		10.55	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	NID1	P14543	1247 aa		10.55	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	C9orf131	Q5VYM1	1079 aa		10.55	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	MSL1	Q68DK7	614 aa		10.55	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	ILDR2	Q71H61	639 aa		10.55	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	NEDD1	Q8NHV4	660 aa		10.55	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	ENAM	Q9NRM1	1142 aa		10.55	□□□□□ -0.72
SOX2-OT-231	ENST00000599082		H3BRJ5	948 aa		10.54	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	B3GALT4	O96024	378 aa		10.54	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	ESRRA	P11474	423 aa	Predicted RBP	10.54	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	CABP4	P57796	275 aa		10.54	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	CCDC85B	Q15834	202 aa	Predicted RBP	10.54	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	SV2B	Q7L1I2	683 aa		10.54	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	WFDC8	Q8IUA0	241 aa		10.54	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	NECAB3	Q96P71	396 aa	Predicted RBP	10.54	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	NOC4L	Q9BVI4	516 aa	Known RBP	10.54	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	PPME1	Q9Y570	386 aa		10.54	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	LINC01387	J3KSC0	135 aa		10.53	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	IGHA1	P01876	353 aa		10.53	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	CDC25B	P30305	580 aa		10.53	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	ZNF157	P51786	506 aa	Predicted RBP	10.53	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	IKBKE	Q14164	716 aa		10.53	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	TXNDC11	Q6PKC3	985 aa		10.53	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	CEP44	Q9C0F1	390 aa		10.53	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	RRAGC	Q9HB90	399 aa		10.53	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	GPN3	Q9UHW5	284 aa	Predicted RBP	10.53	□□□□□ -0.72
SOX2-OT-231	ENST00000599082	SOX1	O00570	391 aa	Predicted RBP	10.52	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	ENC1	O14682	589 aa		10.52	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	CELA3A	P09093	270 aa		10.52	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	HS2ST1	Q7LGA3	356 aa		10.52	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	HGSNAT	Q68CP4	663 aa		10.51	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	ERMP1	Q7Z2K6	904 aa		10.51	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	NT5DC4	Q86YG4	428 aa		10.51	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.51	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	TRIM56	Q9BRZ2	755 aa	Known RBP	10.51	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	TMEM39A	Q9NV64	488 aa		10.51	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	GGT7	Q9UJ14	662 aa		10.51	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	SNRPN	P63162	240 aa	Known RBP	10.5	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	LINC00114	Q6XXX2	140 aa		10.5	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	PAGE1	O75459	146 aa		10.49	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	PIP4K2B	P78356	416 aa		10.49	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	RAD51AP2	Q09MP3	1159 aa		10.49	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	SLC7A3	Q8WY07	619 aa		10.49	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	WNT8B	Q93098	351 aa		10.49	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	SOX17	Q9H6I2	414 aa	Predicted RBP	10.49	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	COPRS	Q9NQ92	184 aa		10.49	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	FSCN2	O14926	492 aa		10.48	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	ERCC5	P28715	1186 aa	Predicted RBP	10.48	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	PPP2R3A	Q06190	1150 aa		10.48	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	SETDB1	Q15047	1291 aa		10.48	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	XP32	Q5T750	250 aa		10.48	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	FAM117B	Q6P1L5	589 aa		10.48	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	TRIM11	Q96F44	468 aa		10.48	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	RSRP1	Q9BUV0	290 aa		10.48	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	TM4SF5	O14894	197 aa		10.47	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	MAP3K11	Q16584	847 aa		10.47	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	ZNF394	Q53GI3	561 aa		10.47	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	CARD10	Q9BWT7	1032 aa		10.47	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	C19orf57	Q0VDD7	668 aa		10.46	□□□□□ -0.73
SOX2-OT-231	ENST00000599082	TRAPPC3L	Q5T215	181 aa		10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms