RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 SEMA3EO15041 775 aa28.1■■■□□ 2.09
SYMPK-212ENST00000598896 ADD2P35612 726 aa28.1■■■□□ 2.09
SYMPK-212ENST00000598896 CNKSR1Q969H4 720 aa28.1■■■□□ 2.09
SYMPK-212ENST00000598896 OSBP2Q969R2 916 aa28.1■■■□□ 2.09
SYMPK-212ENST00000598896 WWC3Q9ULE0 1092 aa28.1■■■□□ 2.09
SYMPK-212ENST00000598896 LRRFIP1Q32MZ4 808 aaKnown RBP28.1■■■□□ 2.09
SYMPK-212ENST00000598896 SLC9C2Q5TAH2 1124 aa28.1■■■□□ 2.09
SYMPK-212ENST00000598896 IPO9Q96P70 1041 aaKnown RBP28.1■■■□□ 2.09
SYMPK-212ENST00000598896 PALD1Q9ULE6 856 aa28.1■■■□□ 2.09
SYMPK-212ENST00000598896 KIAA1551Q9HCM1 1747 aa28.09■■■□□ 2.09
SYMPK-212ENST00000598896 C6orf229H3BNL8 230 aa28.08■■■□□ 2.09
SYMPK-212ENST00000598896 M0R2C6 588 aa28.08■■■□□ 2.09
SYMPK-212ENST00000598896 POLD1P28340 1107 aa28.08■■■□□ 2.09
SYMPK-212ENST00000598896 MPNDQ8N594 471 aa28.08■■■□□ 2.09
SYMPK-212ENST00000598896 PDS5AQ29RF7 1337 aaKnown RBP28.08■■■□□ 2.09
SYMPK-212ENST00000598896 FRAT2O75474 233 aaPredicted RBP28.08■■■□□ 2.09
SYMPK-212ENST00000598896 PDE6AP16499 860 aa28.08■■■□□ 2.09
SYMPK-212ENST00000598896 HSPA4P34932 840 aa28.08■■■□□ 2.09
SYMPK-212ENST00000598896 APPBP2Q92624 585 aa28.08■■■□□ 2.09
SYMPK-212ENST00000598896 SGIP1Q9BQI5 828 aa28.08■■■□□ 2.09
SYMPK-212ENST00000598896 TCRBV5S4A2TA0A5A2 114 aa28.07■■■□□ 2.08
SYMPK-212ENST00000598896 ZBTB22O15209 634 aa28.07■■■□□ 2.08
SYMPK-212ENST00000598896 WASHC4Q2M389 1173 aa28.07■■■□□ 2.08
SYMPK-212ENST00000598896 ZNF804AQ7Z570 1209 aa28.07■■■□□ 2.08
SYMPK-212ENST00000598896 MAP4K1Q92918 833 aa28.07■■■□□ 2.08
SYMPK-212ENST00000598896 PUS7LQ9H0K6 701 aaKnown RBP28.07■■■□□ 2.08
SYMPK-212ENST00000598896 A0A0G2JLW4 131 aa28.06■■■□□ 2.08
SYMPK-212ENST00000598896 KCNA3P22001 575 aa28.06■■■□□ 2.08
SYMPK-212ENST00000598896 ZSCAN25Q6NSZ9 544 aa28.06■■■□□ 2.08
SYMPK-212ENST00000598896 DPP8Q6V1X1 898 aaPredicted RBP28.06■■■□□ 2.08
SYMPK-212ENST00000598896 TDRD7Q8NHU6 1098 aaKnown RBP28.06■■■□□ 2.08
SYMPK-212ENST00000598896 C7orf43Q8WVR3 580 aa28.06■■■□□ 2.08
SYMPK-212ENST00000598896 ZNF532Q9HCE3 1301 aa28.06■■■□□ 2.08
SYMPK-212ENST00000598896 DPEP1P16444 411 aa28.06■■■□□ 2.08
SYMPK-212ENST00000598896 MAP3K12Q12852 859 aa28.06■■■□□ 2.08
SYMPK-212ENST00000598896 UBE3CQ15386 1083 aa28.06■■■□□ 2.08
SYMPK-212ENST00000598896 DDRGK1Q96HY6 314 aa28.06■■■□□ 2.08
SYMPK-212ENST00000598896 ZNF219Q9P2Y4 722 aaPredicted RBP28.06■■■□□ 2.08
SYMPK-212ENST00000598896 MCCP23508 829 aa28.05■■■□□ 2.08
SYMPK-212ENST00000598896 ILDR2Q71H61 639 aa28.05■■■□□ 2.08
SYMPK-212ENST00000598896 ABCF2Q9UG63 623 aa28.05■■■□□ 2.08
SYMPK-212ENST00000598896 SNED1Q8TER0 1413 aa28.05■■■□□ 2.08
SYMPK-212ENST00000598896 MAGEB6Q8N7X4 407 aa28.04■■■□□ 2.08
SYMPK-212ENST00000598896 TMX4Q9H1E5 349 aaPredicted RBP28.04■■■□□ 2.08
SYMPK-212ENST00000598896 CD209Q9NNX6 404 aa28.04■■■□□ 2.08
SYMPK-212ENST00000598896 LRP2BPQ9P2M1 347 aa28.04■■■□□ 2.08
SYMPK-212ENST00000598896 JAG2Q9Y219 1238 aa28.04■■■□□ 2.08
SYMPK-212ENST00000598896 CHAF1AQ13111 956 aaPredicted RBP28.04■■■□□ 2.08
SYMPK-212ENST00000598896 VPS53Q5VIR6 699 aa28.04■■■□□ 2.08
SYMPK-212ENST00000598896 RBM8AQ9Y5S9 174 aaKnown RBP28.04■■■□□ 2.08
SYMPK-212ENST00000598896 PTGER2P43116 358 aa28.02■■■□□ 2.08
SYMPK-212ENST00000598896 NECTIN1Q15223 517 aa28.02■■■□□ 2.08
SYMPK-212ENST00000598896 RIMBP2O15034 1052 aa28.02■■■□□ 2.08
SYMPK-212ENST00000598896 IL1R1P14778 569 aa28.02■■■□□ 2.08
SYMPK-212ENST00000598896 ANAPC15P60006 121 aa28.01■■■□□ 2.07
SYMPK-212ENST00000598896 RASEFQ8IZ41 740 aa28.01■■■□□ 2.07
SYMPK-212ENST00000598896 TTLL6Q8N841 843 aa28.01■■■□□ 2.07
SYMPK-212ENST00000598896 IL17RAQ96F46 866 aa28.01■■■□□ 2.07
SYMPK-212ENST00000598896 CHD4Q14839 1912 aa28■■■□□ 2.07
SYMPK-212ENST00000598896 FOXP2O15409 715 aa28■■■□□ 2.07
SYMPK-212ENST00000598896 GPAA1O43292 621 aa28■■■□□ 2.07
SYMPK-212ENST00000598896 ZNF384Q8TF68 577 aa28■■■□□ 2.07
SYMPK-212ENST00000598896 RAI14Q9P0K7 980 aa28■■■□□ 2.07
SYMPK-212ENST00000598896 C21orf2O43822 256 aa27.99■■■□□ 2.07
SYMPK-212ENST00000598896 HSPD1P10809 573 aaKnown RBP27.99■■■□□ 2.07
SYMPK-212ENST00000598896 TGFB2P61812 414 aa27.99■■■□□ 2.07
SYMPK-212ENST00000598896 SNX14Q9Y5W7 946 aa27.99■■■□□ 2.07
SYMPK-212ENST00000598896 PRDX5P30044 214 aa27.98■■■□□ 2.07
SYMPK-212ENST00000598896 RABEP1Q15276 862 aa27.98■■■□□ 2.07
SYMPK-212ENST00000598896 ADGRA1Q86SQ6 560 aa27.98■■■□□ 2.07
SYMPK-212ENST00000598896 ZC3H12CQ9C0D7 883 aaKnown RBP27.98■■■□□ 2.07
SYMPK-212ENST00000598896 MAST2Q6P0Q8 1798 aa27.98■■■□□ 2.07
SYMPK-212ENST00000598896 BRCA1P38398 1863 aaKnown RBP27.98■■■□□ 2.07
SYMPK-212ENST00000598896 KCNB2Q92953 911 aa27.98■■■□□ 2.07
SYMPK-212ENST00000598896 DSCC1Q9BVC3 393 aa27.98■■■□□ 2.07
SYMPK-212ENST00000598896 SALL1Q9NSC2 1324 aa27.97■■■□□ 2.07
SYMPK-212ENST00000598896 SLC4A3P48751 1232 aa27.97■■■□□ 2.07
SYMPK-212ENST00000598896 CREB3L3Q68CJ9 461 aa27.97■■■□□ 2.07
SYMPK-212ENST00000598896 RTFDC1Q9BY42 306 aaPredicted RBP27.97■■■□□ 2.07
SYMPK-212ENST00000598896 TBC1D2Q9BYX2 928 aa27.97■■■□□ 2.07
SYMPK-212ENST00000598896 CD2BP2O95400 341 aaKnown RBP27.96■■■□□ 2.07
SYMPK-212ENST00000598896 WDR66Q8TBY9 1149 aa27.96■■■□□ 2.07
SYMPK-212ENST00000598896 COA1Q9GZY4 146 aa27.96■■■□□ 2.07
SYMPK-212ENST00000598896 SLC27A2O14975 620 aa27.95■■■□□ 2.07
SYMPK-212ENST00000598896 CC2D2BQ6DHV5 1058 aa27.95■■■□□ 2.07
SYMPK-212ENST00000598896 ERICH6Q7L0X2 663 aa27.95■■■□□ 2.07
SYMPK-212ENST00000598896 PPP1R1BQ9UD71 204 aaPredicted RBP27.95■■■□□ 2.07
SYMPK-212ENST00000598896 CCDC88AQ3V6T2 1871 aa27.95■■■□□ 2.07
SYMPK-212ENST00000598896 NSUN4Q96CB9 384 aaKnown RBP27.95■■■□□ 2.06
SYMPK-212ENST00000598896 EYA3Q99504 573 aa27.95■■■□□ 2.06
SYMPK-212ENST00000598896 TAF6LQ9Y6J9 622 aa27.95■■■□□ 2.06
SYMPK-212ENST00000598896 CYP7A1P22680 504 aa27.94■■■□□ 2.06
SYMPK-212ENST00000598896 MECOMQ03112 1051 aa27.94■■■□□ 2.06
SYMPK-212ENST00000598896 U3KPZ7 1027 aaPredicted RBP27.94■■■□□ 2.06
SYMPK-212ENST00000598896 GRIK5Q16478 980 aa27.93■■■□□ 2.06
SYMPK-212ENST00000598896 DOK7Q18PE1 504 aa27.93■■■□□ 2.06
SYMPK-212ENST00000598896 AIDAQ96BJ3 306 aa27.93■■■□□ 2.06
SYMPK-212ENST00000598896 MBD4O95243 580 aa27.93■■■□□ 2.06
SYMPK-212ENST00000598896 MIGA1Q8NAN2 632 aa27.93■■■□□ 2.06
SYMPK-212ENST00000598896 STRBPQ96SI9 672 aaKnown RBP27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 184.3 ms