RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 NUCB1Q02818 461 aa27.07■■□□□ 1.92
CHMP2A-204ENST00000597848 CHD1LQ86WJ1 897 aa27.07■■□□□ 1.92
CHMP2A-204ENST00000597848 ARID4AP29374 1257 aaPredicted RBP27.06■■□□□ 1.92
CHMP2A-204ENST00000597848 DACT2Q5SW24 774 aa27.06■■□□□ 1.92
CHMP2A-204ENST00000597848 ZNF526Q8TF50 670 aaPredicted RBP27.06■■□□□ 1.92
CHMP2A-204ENST00000597848 MXD3Q9BW11 206 aa27.06■■□□□ 1.92
CHMP2A-204ENST00000597848 ZBTB12Q9Y330 459 aaPredicted RBP27.06■■□□□ 1.92
CHMP2A-204ENST00000597848 ARAP2Q8WZ64 1704 aa27.06■■□□□ 1.92
CHMP2A-204ENST00000597848 RASGRF1Q13972 1273 aa27.05■■□□□ 1.92
CHMP2A-204ENST00000597848 RSBN1LQ6PCB5 846 aaPredicted RBP27.05■■□□□ 1.92
CHMP2A-204ENST00000597848 CENPQQ7L2Z9 268 aaPredicted RBP27.05■■□□□ 1.92
CHMP2A-204ENST00000597848 FAM205AQ6ZU69 1335 aa27.05■■□□□ 1.92
CHMP2A-204ENST00000597848 KDM2BQ8NHM5 1336 aa27.05■■□□□ 1.92
CHMP2A-204ENST00000597848 GMPSP49915 693 aaPredicted RBP27.04■■□□□ 1.92
CHMP2A-204ENST00000597848 GPATCH3Q96I76 525 aa27.04■■□□□ 1.92
CHMP2A-204ENST00000597848 ZNF512BQ96KM6 892 aaPredicted RBP27.04■■□□□ 1.92
CHMP2A-204ENST00000597848 UTRNP46939 3433 aa27.03■■□□□ 1.92
CHMP2A-204ENST00000597848 SCN9AQ15858 1988 aa27.03■■□□□ 1.92
CHMP2A-204ENST00000597848 MFSD14BQ5SR56 506 aa27.03■■□□□ 1.92
CHMP2A-204ENST00000597848 SPATA5Q8NB90 893 aa27.03■■□□□ 1.92
CHMP2A-204ENST00000597848 WDR66Q8TBY9 1149 aa27.03■■□□□ 1.92
CHMP2A-204ENST00000597848 OTUD7AQ8TE49 926 aaPredicted RBP27.03■■□□□ 1.92
CHMP2A-204ENST00000597848 SNRKQ9NRH2 765 aa27.03■■□□□ 1.92
CHMP2A-204ENST00000597848 HMG20BQ9P0W2 317 aa27.03■■□□□ 1.92
CHMP2A-204ENST00000597848 MCAMP43121 646 aa27.02■■□□□ 1.92
CHMP2A-204ENST00000597848 SCARF1Q14162 830 aa27.02■■□□□ 1.92
CHMP2A-204ENST00000597848 TBC1D22AQ8WUA7 517 aa27.02■■□□□ 1.92
CHMP2A-204ENST00000597848 ECHDC1Q9NTX5 307 aa27.02■■□□□ 1.92
CHMP2A-204ENST00000597848 MYO3BQ8WXR4 1341 aa27.01■■□□□ 1.91
CHMP2A-204ENST00000597848 RPS12P25398 132 aaKnown RBP27.01■■□□□ 1.91
CHMP2A-204ENST00000597848 PI16Q6UXB8 463 aa27.01■■□□□ 1.91
CHMP2A-204ENST00000597848 AGBL3Q8NEM8 1001 aa27.01■■□□□ 1.91
CHMP2A-204ENST00000597848 LMOD1P29536 600 aaPredicted RBP27■■□□□ 1.91
CHMP2A-204ENST00000597848 FKBP1AP62942 108 aaKnown RBP27■■□□□ 1.91
CHMP2A-204ENST00000597848 CERS5Q8N5B7 392 aa27■■□□□ 1.91
CHMP2A-204ENST00000597848 ZBTB22O15209 634 aa26.99■■□□□ 1.91
CHMP2A-204ENST00000597848 ATP5JP18859 108 aa26.99■■□□□ 1.91
CHMP2A-204ENST00000597848 MX1P20591 662 aa26.99■■□□□ 1.91
CHMP2A-204ENST00000597848 COL1A1P02452 1464 aaPredicted RBP26.99■■□□□ 1.91
CHMP2A-204ENST00000597848 PDS5AQ29RF7 1337 aaKnown RBP26.98■■□□□ 1.91
CHMP2A-204ENST00000597848 F8W031 263 aaPredicted RBP26.98■■□□□ 1.91
CHMP2A-204ENST00000597848 TSHZ3Q63HK5 1081 aa26.98■■□□□ 1.91
CHMP2A-204ENST00000597848 KIAA0825Q8IV33 1275 aa26.98■■□□□ 1.91
CHMP2A-204ENST00000597848 DPF2Q92785 391 aa26.98■■□□□ 1.91
CHMP2A-204ENST00000597848 L3MBTL3Q96JM7 780 aaPredicted RBP26.98■■□□□ 1.91
CHMP2A-204ENST00000597848 BOLA2Q9H3K6 86 aa26.98■■□□□ 1.91
CHMP2A-204ENST00000597848 CNOT7Q9UIV1 285 aaKnown RBP26.98■■□□□ 1.91
CHMP2A-204ENST00000597848 ZAP70P43403 619 aa26.97■■□□□ 1.91
CHMP2A-204ENST00000597848 SCNN1DP51172 638 aa26.97■■□□□ 1.91
CHMP2A-204ENST00000597848 ZGPATQ8N5A5 531 aaKnown RBP26.97■■□□□ 1.91
CHMP2A-204ENST00000597848 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.97■■□□□ 1.91
CHMP2A-204ENST00000597848 GMLQ99445 158 aa26.97■■□□□ 1.91
CHMP2A-204ENST00000597848 RRAGCQ9HB90 399 aa26.97■■□□□ 1.91
CHMP2A-204ENST00000597848 GPRC5DQ9NZD1 345 aa26.97■■□□□ 1.91
CHMP2A-204ENST00000597848 ABCF2Q9UG63 623 aa26.97■■□□□ 1.91
CHMP2A-204ENST00000597848 TTC41PQ6P2S7 1318 aa26.96■■□□□ 1.91
CHMP2A-204ENST00000597848 USP17L8P0C7I0 530 aa26.96■■□□□ 1.91
CHMP2A-204ENST00000597848 TBC1D9Q6ZT07 1266 aa26.96■■□□□ 1.91
CHMP2A-204ENST00000597848 MICALL2Q8IY33 904 aa26.96■■□□□ 1.91
CHMP2A-204ENST00000597848 DNAJC2Q99543 621 aaKnown RBP26.96■■□□□ 1.91
CHMP2A-204ENST00000597848 HACL1Q9UJ83 578 aa26.96■■□□□ 1.91
CHMP2A-204ENST00000597848 NDUFB9Q9Y6M9 179 aa26.96■■□□□ 1.91
CHMP2A-204ENST00000597848 IQCA1LA6NCM1 817 aa26.95■■□□□ 1.9
CHMP2A-204ENST00000597848 H7C1D1 291 aa26.95■■□□□ 1.9
CHMP2A-204ENST00000597848 ERC2O15083 957 aa26.95■■□□□ 1.9
CHMP2A-204ENST00000597848 SPTY2D1Q68D10 685 aaPredicted RBP26.95■■□□□ 1.9
CHMP2A-204ENST00000597848 OGFOD1Q8N543 542 aa26.95■■□□□ 1.9
CHMP2A-204ENST00000597848 GPBP1L1Q9HC44 474 aaPredicted RBP26.95■■□□□ 1.9
CHMP2A-204ENST00000597848 SALL1Q9NSC2 1324 aa26.94■■□□□ 1.9
CHMP2A-204ENST00000597848 SHTN1A0MZ66 631 aa26.94■■□□□ 1.9
CHMP2A-204ENST00000597848 LDHBP07195 334 aaKnown RBP26.94■■□□□ 1.9
CHMP2A-204ENST00000597848 EPS15P42566 896 aa26.94■■□□□ 1.9
CHMP2A-204ENST00000597848 PDE1AP54750 535 aa26.94■■□□□ 1.9
CHMP2A-204ENST00000597848 GRIK5Q16478 980 aa26.94■■□□□ 1.9
CHMP2A-204ENST00000597848 NMRK2Q9NPI5 230 aa26.94■■□□□ 1.9
CHMP2A-204ENST00000597848 HDAC9Q9UKV0 1011 aa26.94■■□□□ 1.9
CHMP2A-204ENST00000597848 TTF2Q9UNY4 1162 aaKnown RBP26.94■■□□□ 1.9
CHMP2A-204ENST00000597848 SALL3Q9BXA9 1300 aa26.93■■□□□ 1.9
CHMP2A-204ENST00000597848 CYP2E1P05181 493 aaPredicted RBP26.93■■□□□ 1.9
CHMP2A-204ENST00000597848 VEGFAP15692 232 aaPredicted RBP26.93■■□□□ 1.9
CHMP2A-204ENST00000597848 HAUS7Q99871 368 aa26.93■■□□□ 1.9
CHMP2A-204ENST00000597848 LRP2BPQ9P2M1 347 aa26.93■■□□□ 1.9
CHMP2A-204ENST00000597848 STAP2Q9UGK3 403 aa26.93■■□□□ 1.9
CHMP2A-204ENST00000597848 SUGT1Q9Y2Z0 365 aa26.93■■□□□ 1.9
CHMP2A-204ENST00000597848 PSME4Q14997 1843 aa26.93■■□□□ 1.9
CHMP2A-204ENST00000597848 POTECB2RU33 542 aa26.92■■□□□ 1.9
CHMP2A-204ENST00000597848 GLRX3O76003 335 aaKnown RBP26.92■■□□□ 1.9
CHMP2A-204ENST00000597848 PRDX5P30044 214 aa26.92■■□□□ 1.9
CHMP2A-204ENST00000597848 RBM26Q5T8P6 1007 aaKnown RBP26.92■■□□□ 1.9
CHMP2A-204ENST00000597848 ERICH6Q7L0X2 663 aa26.92■■□□□ 1.9
CHMP2A-204ENST00000597848 PLEKHM2Q8IWE5 1019 aa26.92■■□□□ 1.9
CHMP2A-204ENST00000597848 MYH13Q9UKX3 1938 aa26.91■■□□□ 1.9
CHMP2A-204ENST00000597848 GOLIM4O00461 696 aa26.91■■□□□ 1.9
CHMP2A-204ENST00000597848 PDE4AP27815 886 aa26.91■■□□□ 1.9
CHMP2A-204ENST00000597848 RAI14Q9P0K7 980 aa26.91■■□□□ 1.9
CHMP2A-204ENST00000597848 EPHX2P34913 555 aa26.9■■□□□ 1.9
CHMP2A-204ENST00000597848 ZNF280AP59817 542 aaPredicted RBP26.9■■□□□ 1.9
CHMP2A-204ENST00000597848 TTF1Q15361 905 aaPredicted RBP26.9■■□□□ 1.9
CHMP2A-204ENST00000597848 PI4K2BQ8TCG2 481 aa26.9■■□□□ 1.9
CHMP2A-204ENST00000597848 ANTXR1Q9H6X2 564 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms