RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 OGFOD1Q8N543 542 aa19.24■□□□□ 0.67
XRCC1-206ENST00000597811 KLHDC4Q8TBB5 520 aa19.24■□□□□ 0.67
XRCC1-206ENST00000597811 ARAP2Q8WZ64 1704 aa19.24■□□□□ 0.67
XRCC1-206ENST00000597811 PITPNM2Q9BZ72 1349 aa19.24■□□□□ 0.67
XRCC1-206ENST00000597811 IL1R1P14778 569 aa19.23■□□□□ 0.67
XRCC1-206ENST00000597811 HUNKP57058 714 aa19.23■□□□□ 0.67
XRCC1-206ENST00000597811 ZNF804AQ7Z570 1209 aa19.23■□□□□ 0.67
XRCC1-206ENST00000597811 CERS5Q8N5B7 392 aa19.23■□□□□ 0.67
XRCC1-206ENST00000597811 PANK1Q8TE04 598 aa19.23■□□□□ 0.67
XRCC1-206ENST00000597811 CDCA5Q96FF9 252 aa19.23■□□□□ 0.67
XRCC1-206ENST00000597811 GBA2Q9HCG7 927 aaPredicted RBP19.23■□□□□ 0.67
XRCC1-206ENST00000597811 SCAF8Q9UPN6 1271 aaKnown RBP19.23■□□□□ 0.67
XRCC1-206ENST00000597811 RIPOR2Q9Y4F9 1068 aa19.23■□□□□ 0.67
XRCC1-206ENST00000597811 WNT10BO00744 389 aa19.22■□□□□ 0.67
XRCC1-206ENST00000597811 RLBP1P12271 317 aa19.22■□□□□ 0.67
XRCC1-206ENST00000597811 CTCFP49711 727 aaPredicted RBP19.22■□□□□ 0.67
XRCC1-206ENST00000597811 METTL24Q5JXM2 366 aa19.22■□□□□ 0.67
XRCC1-206ENST00000597811 SASH1O94885 1247 aa19.21■□□□□ 0.67
XRCC1-206ENST00000597811 UBE4AQ14139 1066 aa19.21■□□□□ 0.67
XRCC1-206ENST00000597811 LRRC24Q50LG9 513 aa19.21■□□□□ 0.67
XRCC1-206ENST00000597811 TNS4Q8IZW8 715 aa19.21■□□□□ 0.67
XRCC1-206ENST00000597811 SIL1Q9H173 461 aa19.21■□□□□ 0.67
XRCC1-206ENST00000597811 JAG2Q9Y219 1238 aa19.21■□□□□ 0.67
XRCC1-206ENST00000597811 PAPPA2Q9BXP8 1791 aa19.21■□□□□ 0.67
XRCC1-206ENST00000597811 MROH5Q6ZUA9 1318 aa19.21■□□□□ 0.67
XRCC1-206ENST00000597811 MYH13Q9UKX3 1938 aa19.2■□□□□ 0.66
XRCC1-206ENST00000597811 SRGAP3O43295 1099 aa19.2■□□□□ 0.66
XRCC1-206ENST00000597811 MAP2K2P36507 400 aa19.2■□□□□ 0.66
XRCC1-206ENST00000597811 MMP14P50281 582 aa19.2■□□□□ 0.66
XRCC1-206ENST00000597811 C2orf69Q8N8R5 385 aa19.2■□□□□ 0.66
XRCC1-206ENST00000597811 HSPA8P11142 646 aaKnown RBP19.19■□□□□ 0.66
XRCC1-206ENST00000597811 GYG1P46976 350 aa19.19■□□□□ 0.66
XRCC1-206ENST00000597811 LBX1P52954 281 aa19.19■□□□□ 0.66
XRCC1-206ENST00000597811 ZBED3Q96IU2 234 aaPredicted RBP19.19■□□□□ 0.66
XRCC1-206ENST00000597811 PRDM10Q9NQV6 1147 aa19.19■□□□□ 0.66
XRCC1-206ENST00000597811 HDAC9Q9UKV0 1011 aa19.19■□□□□ 0.66
XRCC1-206ENST00000597811 RGMBQ6NW40 437 aa19.18■□□□□ 0.66
XRCC1-206ENST00000597811 VGLL2Q8N8G2 317 aa19.18■□□□□ 0.66
XRCC1-206ENST00000597811 FAM84BQ96KN1 310 aaPredicted RBP19.18■□□□□ 0.66
XRCC1-206ENST00000597811 ZIC5Q96T25 663 aa19.18■□□□□ 0.66
XRCC1-206ENST00000597811 C1orf115Q9H7X2 142 aa19.18■□□□□ 0.66
XRCC1-206ENST00000597811 COG6Q9Y2V7 657 aa19.18■□□□□ 0.66
XRCC1-206ENST00000597811 AKAP11Q9UKA4 1901 aa19.17■□□□□ 0.66
XRCC1-206ENST00000597811 F8W031 263 aaPredicted RBP19.17■□□□□ 0.66
XRCC1-206ENST00000597811 EYA2O00167 538 aa19.17■□□□□ 0.66
XRCC1-206ENST00000597811 RFX5P48382 616 aaPredicted RBP19.17■□□□□ 0.66
XRCC1-206ENST00000597811 FKBP1AP62942 108 aaKnown RBP19.17■□□□□ 0.66
XRCC1-206ENST00000597811 PTPN12Q05209 780 aaKnown RBP19.17■□□□□ 0.66
XRCC1-206ENST00000597811 PRAMEF18Q5VWM3 479 aa19.17■□□□□ 0.66
XRCC1-206ENST00000597811 TDRD7Q8NHU6 1098 aaKnown RBP19.17■□□□□ 0.66
XRCC1-206ENST00000597811 PA2G4Q9UQ80 394 aaKnown RBP19.17■□□□□ 0.66
XRCC1-206ENST00000597811 FAM155AB1AL88 458 aaPredicted RBP19.16■□□□□ 0.66
XRCC1-206ENST00000597811 HIBADHP31937 336 aaKnown RBP19.16■□□□□ 0.66
XRCC1-206ENST00000597811 NOGQ13253 232 aa19.16■□□□□ 0.66
XRCC1-206ENST00000597811 BEGAINQ9BUH8 593 aa19.16■□□□□ 0.66
XRCC1-206ENST00000597811 PCDHAC2Q9Y5I4 1007 aa19.16■□□□□ 0.66
XRCC1-206ENST00000597811 FAM205AQ6ZU69 1335 aa19.16■□□□□ 0.66
XRCC1-206ENST00000597811 CASP8AP2Q9UKL3 1982 aa19.15■□□□□ 0.66
XRCC1-206ENST00000597811 ZBTB7BO15156 539 aaPredicted RBP19.15■□□□□ 0.66
XRCC1-206ENST00000597811 PDE8BO95263 885 aa19.15■□□□□ 0.66
XRCC1-206ENST00000597811 MVPQ14764 893 aaKnown RBP19.15■□□□□ 0.66
XRCC1-206ENST00000597811 VPS37DQ86XT2 251 aa19.15■□□□□ 0.66
XRCC1-206ENST00000597811 ZNF157P51786 506 aaPredicted RBP19.14■□□□□ 0.65
XRCC1-206ENST00000597811 DLGAP5Q15398 846 aa19.14■□□□□ 0.65
XRCC1-206ENST00000597811 MOB2Q70IA6 237 aa19.14■□□□□ 0.65
XRCC1-206ENST00000597811 MTMR14Q8NCE2 650 aa19.14■□□□□ 0.65
XRCC1-206ENST00000597811 CEP126Q9P2H0 1117 aa19.14■□□□□ 0.65
XRCC1-206ENST00000597811 TSKSQ9UJT2 592 aa19.14■□□□□ 0.65
XRCC1-206ENST00000597811 DDX19BQ9UMR2 479 aa19.14■□□□□ 0.65
XRCC1-206ENST00000597811 FRAT2O75474 233 aaPredicted RBP19.13■□□□□ 0.65
XRCC1-206ENST00000597811 IFIT1P09914 478 aaKnown RBP19.13■□□□□ 0.65
XRCC1-206ENST00000597811 IL15P40933 162 aaPredicted RBP19.13■□□□□ 0.65
XRCC1-206ENST00000597811 FKBP1BP68106 108 aa19.13■□□□□ 0.65
XRCC1-206ENST00000597811 CFAP100Q494V2 611 aa19.13■□□□□ 0.65
XRCC1-206ENST00000597811 CAVIN4Q5BKX8 364 aa19.13■□□□□ 0.65
XRCC1-206ENST00000597811 MFSD14BQ5SR56 506 aa19.13■□□□□ 0.65
XRCC1-206ENST00000597811 FBXO33Q7Z6M2 555 aa19.13■□□□□ 0.65
XRCC1-206ENST00000597811 APOBEC3FQ8IUX4 373 aaKnown RBP19.13■□□□□ 0.65
XRCC1-206ENST00000597811 CHMP4BQ9H444 224 aaKnown RBP19.13■□□□□ 0.65
XRCC1-206ENST00000597811 FBXO3Q9UK99 471 aa19.13■□□□□ 0.65
XRCC1-206ENST00000597811 AOX1Q06278 1338 aa19.12■□□□□ 0.65
XRCC1-206ENST00000597811 PNMA6EA0A0J9YXQ4 647 aa19.12■□□□□ 0.65
XRCC1-206ENST00000597811 CIAO1O76071 339 aa19.12■□□□□ 0.65
XRCC1-206ENST00000597811 SLC10A3P09131 477 aa19.12■□□□□ 0.65
XRCC1-206ENST00000597811 OS9Q13438 667 aaPredicted RBP19.12■□□□□ 0.65
XRCC1-206ENST00000597811 MTX1Q13505 466 aa19.12■□□□□ 0.65
XRCC1-206ENST00000597811 PUM3Q15397 648 aaKnown RBP19.12■□□□□ 0.65
XRCC1-206ENST00000597811 CCDC102AQ96A19 550 aa19.12■□□□□ 0.65
XRCC1-206ENST00000597811 COPRSQ9NQ92 184 aa19.12■□□□□ 0.65
XRCC1-206ENST00000597811 IQSEC3Q9UPP2 1182 aaPredicted RBP19.12■□□□□ 0.65
XRCC1-206ENST00000597811 COL1A1P02452 1464 aaPredicted RBP19.11■□□□□ 0.65
XRCC1-206ENST00000597811 SPDYE2BA6NHP3 402 aa19.11■□□□□ 0.65
XRCC1-206ENST00000597811 SPDYE6P0CI01 402 aa19.11■□□□□ 0.65
XRCC1-206ENST00000597811 SLC5A1P13866 664 aa19.11■□□□□ 0.65
XRCC1-206ENST00000597811 FGFR2P21802 821 aa19.11■□□□□ 0.65
XRCC1-206ENST00000597811 G3BP1Q13283 466 aaKnown RBP eCLIP19.11■□□□□ 0.65
XRCC1-206ENST00000597811 PDE3AQ14432 1141 aa19.11■□□□□ 0.65
XRCC1-206ENST00000597811 C20orf194Q5TEA3 1177 aa19.11■□□□□ 0.65
XRCC1-206ENST00000597811 ATG9AQ7Z3C6 839 aa19.11■□□□□ 0.65
XRCC1-206ENST00000597811 PRMT6Q96LA8 375 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms