RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 UQCRFS1P1P0C7P4 283 aa10.25□□□□□ -0.77
VRK3-211ENST00000596445 RPS12P25398 132 aaKnown RBP10.25□□□□□ -0.77
VRK3-211ENST00000596445 ARID4AP29374 1257 aaPredicted RBP10.25□□□□□ -0.77
VRK3-211ENST00000596445 FKBP1AP62942 108 aaKnown RBP10.25□□□□□ -0.77
VRK3-211ENST00000596445 ANKRD45Q5TZF3 282 aa10.25□□□□□ -0.77
VRK3-211ENST00000596445 ERICH6BQ5W0A0 696 aa10.25□□□□□ -0.77
VRK3-211ENST00000596445 AGBL3Q8NEM8 1001 aa10.25□□□□□ -0.77
VRK3-211ENST00000596445 DPF2Q92785 391 aa10.25□□□□□ -0.77
VRK3-211ENST00000596445 ZNF512BQ96KM6 892 aaPredicted RBP10.25□□□□□ -0.77
VRK3-211ENST00000596445 TLR7Q9NYK1 1049 aaKnown RBP10.25□□□□□ -0.77
VRK3-211ENST00000596445 ZBTB47Q9UFB7 747 aaPredicted RBP10.25□□□□□ -0.77
VRK3-211ENST00000596445 DENND2AQ9ULE3 1009 aa10.25□□□□□ -0.77
VRK3-211ENST00000596445 PDS5AQ29RF7 1337 aaKnown RBP10.25□□□□□ -0.77
VRK3-211ENST00000596445 MYO3BQ8WXR4 1341 aa10.25□□□□□ -0.77
VRK3-211ENST00000596445 GMPSP49915 693 aaPredicted RBP10.24□□□□□ -0.77
VRK3-211ENST00000596445 RASGRF1Q13972 1273 aa10.24□□□□□ -0.77
VRK3-211ENST00000596445 TTC39AQ5SRH9 613 aa10.24□□□□□ -0.77
VRK3-211ENST00000596445 WDR66Q8TBY9 1149 aa10.24□□□□□ -0.77
VRK3-211ENST00000596445 ZNF526Q8TF50 670 aaPredicted RBP10.24□□□□□ -0.77
VRK3-211ENST00000596445 TBC1D22AQ8WUA7 517 aa10.24□□□□□ -0.77
VRK3-211ENST00000596445 GMLQ99445 158 aa10.24□□□□□ -0.77
VRK3-211ENST00000596445 BCL11AQ9H165 835 aa10.24□□□□□ -0.77
VRK3-211ENST00000596445 GPBP1L1Q9HC44 474 aaPredicted RBP10.24□□□□□ -0.77
VRK3-211ENST00000596445 GPRC5DQ9NZD1 345 aa10.24□□□□□ -0.77
VRK3-211ENST00000596445 ZBTB12Q9Y330 459 aaPredicted RBP10.24□□□□□ -0.77
VRK3-211ENST00000596445 COL1A1P02452 1464 aaPredicted RBP10.23□□□□□ -0.77
VRK3-211ENST00000596445 IQCA1LA6NCM1 817 aa10.23□□□□□ -0.77
VRK3-211ENST00000596445 POTECB2RU33 542 aa10.23□□□□□ -0.77
VRK3-211ENST00000596445 VEGFAP15692 232 aaPredicted RBP10.23□□□□□ -0.77
VRK3-211ENST00000596445 LMOD1P29536 600 aaPredicted RBP10.23□□□□□ -0.77
VRK3-211ENST00000596445 MCAMP43121 646 aa10.23□□□□□ -0.77
VRK3-211ENST00000596445 MMP14P50281 582 aa10.23□□□□□ -0.77
VRK3-211ENST00000596445 SCNN1DP51172 638 aa10.23□□□□□ -0.77
VRK3-211ENST00000596445 NUCB1Q02818 461 aa10.23□□□□□ -0.77
VRK3-211ENST00000596445 CHAF1AQ13111 956 aaPredicted RBP10.23□□□□□ -0.77
VRK3-211ENST00000596445 MFSD14BQ5SR56 506 aa10.23□□□□□ -0.77
VRK3-211ENST00000596445 SPATA5Q8NB90 893 aa10.23□□□□□ -0.77
VRK3-211ENST00000596445 ZNF784Q8NCA9 323 aaPredicted RBP10.23□□□□□ -0.77
VRK3-211ENST00000596445 MXD3Q9BW11 206 aa10.23□□□□□ -0.77
VRK3-211ENST00000596445 RRAGCQ9HB90 399 aa10.23□□□□□ -0.77
VRK3-211ENST00000596445 CNOT7Q9UIV1 285 aaKnown RBP10.23□□□□□ -0.77
VRK3-211ENST00000596445 HACL1Q9UJ83 578 aa10.23□□□□□ -0.77
VRK3-211ENST00000596445 JAG2Q9Y219 1238 aa10.23□□□□□ -0.77
VRK3-211ENST00000596445 USP17L8P0C7I0 530 aa10.22□□□□□ -0.77
VRK3-211ENST00000596445 SCARF1Q14162 830 aa10.22□□□□□ -0.77
VRK3-211ENST00000596445 B4GALNT3Q6L9W6 998 aa10.22□□□□□ -0.77
VRK3-211ENST00000596445 CHD1LQ86WJ1 897 aa10.22□□□□□ -0.77
VRK3-211ENST00000596445 C16orf71Q8IYS4 520 aaPredicted RBP10.22□□□□□ -0.77
VRK3-211ENST00000596445 ZGPATQ8N5A5 531 aaKnown RBP10.22□□□□□ -0.77
VRK3-211ENST00000596445 CERS5Q8N5B7 392 aa10.22□□□□□ -0.77
VRK3-211ENST00000596445 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.22□□□□□ -0.77
VRK3-211ENST00000596445 GPATCH3Q96I76 525 aa10.22□□□□□ -0.77
VRK3-211ENST00000596445 NMRK2Q9NPI5 230 aa10.22□□□□□ -0.77
VRK3-211ENST00000596445 HMG20BQ9P0W2 317 aa10.22□□□□□ -0.77
VRK3-211ENST00000596445 SUGT1Q9Y2Z0 365 aa10.22□□□□□ -0.77
VRK3-211ENST00000596445 SALL1Q9NSC2 1324 aa10.22□□□□□ -0.77
VRK3-211ENST00000596445 H7C1D1 291 aa10.21□□□□□ -0.77
VRK3-211ENST00000596445 ATP5JP18859 108 aa10.21□□□□□ -0.77
VRK3-211ENST00000596445 EPS15P42566 896 aa10.21□□□□□ -0.77
VRK3-211ENST00000596445 ZNF280AP59817 542 aaPredicted RBP10.21□□□□□ -0.77
VRK3-211ENST00000596445 PI16Q6UXB8 463 aa10.21□□□□□ -0.77
VRK3-211ENST00000596445 KIAA0825Q8IV33 1275 aa10.21□□□□□ -0.77
VRK3-211ENST00000596445 MICALL2Q8IY33 904 aa10.21□□□□□ -0.77
VRK3-211ENST00000596445 OGFOD1Q8N543 542 aa10.21□□□□□ -0.77
VRK3-211ENST00000596445 CCDC136Q96JN2 1154 aa10.21□□□□□ -0.77
VRK3-211ENST00000596445 LNPKQ9C0E8 428 aa10.21□□□□□ -0.77
VRK3-211ENST00000596445 TAF1DQ9H5J8 278 aaPredicted RBP10.21□□□□□ -0.77
VRK3-211ENST00000596445 ECHDC1Q9NTX5 307 aa10.21□□□□□ -0.77
VRK3-211ENST00000596445 MYO5AQ9Y4I1 1855 aaKnown RBP10.21□□□□□ -0.78
VRK3-211ENST00000596445 SHTN1A0MZ66 631 aa10.2□□□□□ -0.78
VRK3-211ENST00000596445 EPHX2P34913 555 aa10.2□□□□□ -0.78
VRK3-211ENST00000596445 ZAP70P43403 619 aa10.2□□□□□ -0.78
VRK3-211ENST00000596445 SPTY2D1Q68D10 685 aaPredicted RBP10.2□□□□□ -0.78
VRK3-211ENST00000596445 TTC41PQ6P2S7 1318 aa10.2□□□□□ -0.78
VRK3-211ENST00000596445 CENPQQ7L2Z9 268 aaPredicted RBP10.2□□□□□ -0.78
VRK3-211ENST00000596445 OTUD7AQ8TE49 926 aaPredicted RBP10.2□□□□□ -0.78
VRK3-211ENST00000596445 SALL3Q9BXA9 1300 aa10.2□□□□□ -0.78
VRK3-211ENST00000596445 SNRKQ9NRH2 765 aa10.2□□□□□ -0.78
VRK3-211ENST00000596445 ADARB2Q9NS39 739 aaKnown RBP10.2□□□□□ -0.78
VRK3-211ENST00000596445 PPP4R2Q9NY27 417 aa10.2□□□□□ -0.78
VRK3-211ENST00000596445 HDAC9Q9UKV0 1011 aa10.2□□□□□ -0.78
VRK3-211ENST00000596445 TTF2Q9UNY4 1162 aaKnown RBP10.2□□□□□ -0.78
VRK3-211ENST00000596445 MYH2Q9UKX2 1941 aa10.19□□□□□ -0.78
VRK3-211ENST00000596445 MAST3O60307 1309 aa10.19□□□□□ -0.78
VRK3-211ENST00000596445 F8W031 263 aaPredicted RBP10.19□□□□□ -0.78
VRK3-211ENST00000596445 ERC2O15083 957 aa10.19□□□□□ -0.78
VRK3-211ENST00000596445 CYP2E1P05181 493 aaPredicted RBP10.19□□□□□ -0.78
VRK3-211ENST00000596445 LDHBP07195 334 aaKnown RBP10.19□□□□□ -0.78
VRK3-211ENST00000596445 MX1P20591 662 aa10.19□□□□□ -0.78
VRK3-211ENST00000596445 PRDX5P30044 214 aa10.19□□□□□ -0.78
VRK3-211ENST00000596445 GRIK5Q16478 980 aa10.19□□□□□ -0.78
VRK3-211ENST00000596445 USP50Q70EL3 339 aaPredicted RBP10.19□□□□□ -0.78
VRK3-211ENST00000596445 SAMD7Q7Z3H4 446 aa10.19□□□□□ -0.78
VRK3-211ENST00000596445 PNMA8AQ86V59 439 aaPredicted RBP10.19□□□□□ -0.78
VRK3-211ENST00000596445 MRIQ9BWK5 157 aa10.19□□□□□ -0.78
VRK3-211ENST00000596445 MYOZ2Q9NPC6 264 aa10.19□□□□□ -0.78
VRK3-211ENST00000596445 ABCF2Q9UG63 623 aa10.19□□□□□ -0.78
VRK3-211ENST00000596445 STAP2Q9UGK3 403 aa10.19□□□□□ -0.78
VRK3-211ENST00000596445 DOCK2Q92608 1830 aa10.19□□□□□ -0.78
VRK3-211ENST00000596445 POLR2AP24928 1970 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms