RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PUM3Q15397 648 aaKnown RBP16.29■□□□□ 0.2
USE1-207ENST00000596136 NBPF9Q3BBW0 867 aa16.29■□□□□ 0.2
USE1-207ENST00000596136 ANGEL2Q5VTE6 544 aaKnown RBP16.29■□□□□ 0.2
USE1-207ENST00000596136 DLK2Q6UY11 383 aa16.29■□□□□ 0.2
USE1-207ENST00000596136 KIAA0825Q8IV33 1275 aa16.29■□□□□ 0.2
USE1-207ENST00000596136 SULF1Q8IWU6 871 aa16.29■□□□□ 0.2
USE1-207ENST00000596136 TMEM57Q8N5G2 664 aa16.29■□□□□ 0.2
USE1-207ENST00000596136 CLUAP1Q96AJ1 413 aa16.29■□□□□ 0.2
USE1-207ENST00000596136 HDAC9Q9UKV0 1011 aa16.29■□□□□ 0.2
USE1-207ENST00000596136 ADM5C9JUS6 153 aa16.28■□□□□ 0.2
USE1-207ENST00000596136 WDR33Q9C0J8 1336 aaKnown RBP16.27■□□□□ 0.2
USE1-207ENST00000596136 GNAI2P04899 355 aa16.27■□□□□ 0.2
USE1-207ENST00000596136 IFIT1P09914 478 aaKnown RBP16.27■□□□□ 0.2
USE1-207ENST00000596136 IL15P40933 162 aaPredicted RBP16.27■□□□□ 0.2
USE1-207ENST00000596136 CAVIN4Q5BKX8 364 aa16.27■□□□□ 0.2
USE1-207ENST00000596136 LPIN2Q92539 896 aa16.27■□□□□ 0.2
USE1-207ENST00000596136 ZBTB22O15209 634 aa16.26■□□□□ 0.19
USE1-207ENST00000596136 DZIP1LQ8IYY4 767 aaKnown RBP16.26■□□□□ 0.19
USE1-207ENST00000596136 CEP126Q9P2H0 1117 aa16.26■□□□□ 0.19
USE1-207ENST00000596136 PA2G4Q9UQ80 394 aaKnown RBP16.26■□□□□ 0.19
USE1-207ENST00000596136 SRGAP3O43295 1099 aa16.25■□□□□ 0.19
USE1-207ENST00000596136 RLBP1P12271 317 aa16.25■□□□□ 0.19
USE1-207ENST00000596136 ECE1P42892 770 aa16.25■□□□□ 0.19
USE1-207ENST00000596136 BCAMP50895 628 aa16.25■□□□□ 0.19
USE1-207ENST00000596136 MFSD14BQ5SR56 506 aa16.25■□□□□ 0.19
USE1-207ENST00000596136 VPS37DQ86XT2 251 aa16.25■□□□□ 0.19
USE1-207ENST00000596136 CDCA5Q96FF9 252 aa16.25■□□□□ 0.19
USE1-207ENST00000596136 CAPNS2Q96L46 248 aa16.25■□□□□ 0.19
USE1-207ENST00000596136 SIL1Q9H173 461 aa16.25■□□□□ 0.19
USE1-207ENST00000596136 ZNF408Q9H9D4 720 aa16.25■□□□□ 0.19
USE1-207ENST00000596136 THSD7BQ9C0I4 1608 aa16.24■□□□□ 0.19
USE1-207ENST00000596136 ZBTB7BO15156 539 aaPredicted RBP16.24■□□□□ 0.19
USE1-207ENST00000596136 HSPA1AP0DMV8 641 aaKnown RBP16.24■□□□□ 0.19
USE1-207ENST00000596136 HSPA1BP0DMV9 641 aaKnown RBP16.24■□□□□ 0.19
USE1-207ENST00000596136 SLC5A1P13866 664 aa16.24■□□□□ 0.19
USE1-207ENST00000596136 DLGAP5Q15398 846 aa16.24■□□□□ 0.19
USE1-207ENST00000596136 GBA2Q9HCG7 927 aaPredicted RBP16.24■□□□□ 0.19
USE1-207ENST00000596136 JAG2Q9Y219 1238 aa16.24■□□□□ 0.19
USE1-207ENST00000596136 ARAP2Q8WZ64 1704 aa16.24■□□□□ 0.19
USE1-207ENST00000596136 SPDYE2BA6NHP3 402 aa16.23■□□□□ 0.19
USE1-207ENST00000596136 SPDYE6P0CI01 402 aa16.23■□□□□ 0.19
USE1-207ENST00000596136 CFAP100Q494V2 611 aa16.23■□□□□ 0.19
USE1-207ENST00000596136 CYP4F22Q6NT55 531 aa16.23■□□□□ 0.19
USE1-207ENST00000596136 FTSJ3Q8IY81 847 aaKnown RBP16.23■□□□□ 0.19
USE1-207ENST00000596136 C2orf69Q8N8R5 385 aa16.23■□□□□ 0.19
USE1-207ENST00000596136 TBC1D22AQ8WUA7 517 aa16.23■□□□□ 0.19
USE1-207ENST00000596136 WBP1LQ9NX94 342 aa16.23■□□□□ 0.19
USE1-207ENST00000596136 SERPINA10Q9UK55 444 aa16.23■□□□□ 0.19
USE1-207ENST00000596136 ECM29Q5VYK3 1845 aa16.23■□□□□ 0.19
USE1-207ENST00000596136 PNMA6EA0A0J9YXQ4 647 aa16.22■□□□□ 0.19
USE1-207ENST00000596136 F8W031 263 aaPredicted RBP16.22■□□□□ 0.19
USE1-207ENST00000596136 MAP2K2P36507 400 aa16.22■□□□□ 0.19
USE1-207ENST00000596136 HUNKP57058 714 aa16.22■□□□□ 0.19
USE1-207ENST00000596136 FKBP1BP68106 108 aa16.22■□□□□ 0.19
USE1-207ENST00000596136 ATP2B3Q16720 1220 aa16.22■□□□□ 0.19
USE1-207ENST00000596136 APOBEC3FQ8IUX4 373 aaKnown RBP16.22■□□□□ 0.19
USE1-207ENST00000596136 PRMT6Q96LA8 375 aaPredicted RBP16.22■□□□□ 0.19
USE1-207ENST00000596136 MRIQ9BWK5 157 aa16.22■□□□□ 0.19
USE1-207ENST00000596136 IQSEC3Q9UPP2 1182 aaPredicted RBP16.22■□□□□ 0.19
USE1-207ENST00000596136 SUGT1Q9Y2Z0 365 aa16.22■□□□□ 0.19
USE1-207ENST00000596136 ATP8B2P98198 1209 aa16.21■□□□□ 0.19
USE1-207ENST00000596136 HDLBPQ00341 1268 aaKnown RBP16.21■□□□□ 0.19
USE1-207ENST00000596136 POLA2Q14181 598 aa16.21■□□□□ 0.19
USE1-207ENST00000596136 SSH3Q8TE77 659 aa16.21■□□□□ 0.19
USE1-207ENST00000596136 TTF2Q9UNY4 1162 aaKnown RBP16.21■□□□□ 0.19
USE1-207ENST00000596136 SCAF8Q9UPN6 1271 aaKnown RBP16.21■□□□□ 0.19
USE1-207ENST00000596136 PCDHAC2Q9Y5I4 1007 aa16.21■□□□□ 0.19
USE1-207ENST00000596136 FRAT2O75474 233 aaPredicted RBP16.2■□□□□ 0.18
USE1-207ENST00000596136 MAP2K1Q02750 393 aaPredicted RBP16.2■□□□□ 0.18
USE1-207ENST00000596136 GRIK5Q16478 980 aa16.2■□□□□ 0.18
USE1-207ENST00000596136 COL1A1P02452 1464 aaPredicted RBP16.2■□□□□ 0.18
USE1-207ENST00000596136 PAPPA2Q9BXP8 1791 aa16.19■□□□□ 0.18
USE1-207ENST00000596136 MS4A1P11836 297 aa16.19■□□□□ 0.18
USE1-207ENST00000596136 CHAF1AQ13111 956 aaPredicted RBP16.19■□□□□ 0.18
USE1-207ENST00000596136 RGMBQ6NW40 437 aa16.19■□□□□ 0.18
USE1-207ENST00000596136 ITPRIPQ8IWB1 547 aa16.19■□□□□ 0.18
USE1-207ENST00000596136 PPP2R3BQ9Y5P8 575 aa16.19■□□□□ 0.18
USE1-207ENST00000596136 AOX1Q06278 1338 aa16.19■□□□□ 0.18
USE1-207ENST00000596136 MYH13Q9UKX3 1938 aa16.18■□□□□ 0.18
USE1-207ENST00000596136 FAM155AB1AL88 458 aaPredicted RBP16.18■□□□□ 0.18
USE1-207ENST00000596136 SEMA3EO15041 775 aa16.18■□□□□ 0.18
USE1-207ENST00000596136 MYO1BO43795 1136 aa16.18■□□□□ 0.18
USE1-207ENST00000596136 CRKP46108 304 aa16.18■□□□□ 0.18
USE1-207ENST00000596136 TFCP2Q12800 502 aa16.18■□□□□ 0.18
USE1-207ENST00000596136 PRAMEF18Q5VWM3 479 aa16.18■□□□□ 0.18
USE1-207ENST00000596136 PAXIP1Q6ZW49 1069 aaPredicted RBP16.18■□□□□ 0.18
USE1-207ENST00000596136 WDR66Q8TBY9 1149 aa16.18■□□□□ 0.18
USE1-207ENST00000596136 PANK1Q8TE04 598 aa16.18■□□□□ 0.18
USE1-207ENST00000596136 CCDC102AQ96A19 550 aa16.18■□□□□ 0.18
USE1-207ENST00000596136 DEFB129Q9H1M3 183 aa16.18■□□□□ 0.18
USE1-207ENST00000596136 GNL3LQ9NVN8 582 aaKnown RBP16.18■□□□□ 0.18
USE1-207ENST00000596136 RCAN3Q9UKA8 241 aa16.18■□□□□ 0.18
USE1-207ENST00000596136 AKAP2Q9Y2D5 859 aa16.18■□□□□ 0.18
USE1-207ENST00000596136 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.18■□□□□ 0.18
USE1-207ENST00000596136 FOXN1O15353 648 aa16.17■□□□□ 0.18
USE1-207ENST00000596136 AOC2O75106 756 aa16.17■□□□□ 0.18
USE1-207ENST00000596136 PHKA1P46020 1223 aa16.17■□□□□ 0.18
USE1-207ENST00000596136 TIMM10P62072 90 aa16.17■□□□□ 0.18
USE1-207ENST00000596136 NOGQ13253 232 aa16.17■□□□□ 0.18
USE1-207ENST00000596136 SPDYE2Q495Y8 402 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms