RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 FTSJ3Q8IY81 847 aaKnown RBP19.68■□□□□ 0.74
ZNF550-207ENST00000595560 COPRSQ9NQ92 184 aa19.68■□□□□ 0.74
ZNF550-207ENST00000595560 HDAC9Q9UKV0 1011 aa19.68■□□□□ 0.74
ZNF550-207ENST00000595560 THSD7BQ9C0I4 1608 aa19.67■□□□□ 0.74
ZNF550-207ENST00000595560 ADM5C9JUS6 153 aa19.67■□□□□ 0.74
ZNF550-207ENST00000595560 GNAI2P04899 355 aa19.67■□□□□ 0.74
ZNF550-207ENST00000595560 DEFB115Q30KQ5 88 aa19.67■□□□□ 0.74
ZNF550-207ENST00000595560 CAVIN4Q5BKX8 364 aa19.67■□□□□ 0.74
ZNF550-207ENST00000595560 DZIP1LQ8IYY4 767 aaKnown RBP19.67■□□□□ 0.74
ZNF550-207ENST00000595560 SIL1Q9H173 461 aa19.67■□□□□ 0.74
ZNF550-207ENST00000595560 TLL2Q9Y6L7 1015 aa19.67■□□□□ 0.74
ZNF550-207ENST00000595560 WNT10BO00744 389 aa19.66■□□□□ 0.74
ZNF550-207ENST00000595560 SRGAP3O43295 1099 aa19.66■□□□□ 0.74
ZNF550-207ENST00000595560 IFIT1P09914 478 aaKnown RBP19.66■□□□□ 0.74
ZNF550-207ENST00000595560 IL15P40933 162 aaPredicted RBP19.66■□□□□ 0.74
ZNF550-207ENST00000595560 NBPF9Q3BBW0 867 aa19.66■□□□□ 0.74
ZNF550-207ENST00000595560 VPS37DQ86XT2 251 aa19.66■□□□□ 0.74
ZNF550-207ENST00000595560 VEGFBP49765 207 aa19.65■□□□□ 0.74
ZNF550-207ENST00000595560 SAPCD2Q86UD0 394 aa19.65■□□□□ 0.74
ZNF550-207ENST00000595560 LPIN2Q92539 896 aa19.65■□□□□ 0.74
ZNF550-207ENST00000595560 ZBED3Q96IU2 234 aaPredicted RBP19.65■□□□□ 0.74
ZNF550-207ENST00000595560 ZNF408Q9H9D4 720 aa19.65■□□□□ 0.74
ZNF550-207ENST00000595560 PA2G4Q9UQ80 394 aaKnown RBP19.65■□□□□ 0.74
ZNF550-207ENST00000595560 JAG2Q9Y219 1238 aa19.65■□□□□ 0.74
ZNF550-207ENST00000595560 RLBP1P12271 317 aa19.64■□□□□ 0.73
ZNF550-207ENST00000595560 SLC5A1P13866 664 aa19.64■□□□□ 0.73
ZNF550-207ENST00000595560 MFSD14BQ5SR56 506 aa19.64■□□□□ 0.73
ZNF550-207ENST00000595560 DLK2Q6UY11 383 aa19.64■□□□□ 0.73
ZNF550-207ENST00000595560 CEP126Q9P2H0 1117 aa19.64■□□□□ 0.73
ZNF550-207ENST00000595560 BCAMP50895 628 aa19.63■□□□□ 0.73
ZNF550-207ENST00000595560 ITPRIPQ8IWB1 547 aa19.63■□□□□ 0.73
ZNF550-207ENST00000595560 MTMR14Q8NCE2 650 aa19.63■□□□□ 0.73
ZNF550-207ENST00000595560 HHIPL1Q96JK4 782 aa19.63■□□□□ 0.73
ZNF550-207ENST00000595560 ATP2B3Q16720 1220 aa19.62■□□□□ 0.73
ZNF550-207ENST00000595560 CDCA5Q96FF9 252 aa19.62■□□□□ 0.73
ZNF550-207ENST00000595560 WDR33Q9C0J8 1336 aaKnown RBP19.61■□□□□ 0.73
ZNF550-207ENST00000595560 F8W031 263 aaPredicted RBP19.61■□□□□ 0.73
ZNF550-207ENST00000595560 ECE1P42892 770 aa19.61■□□□□ 0.73
ZNF550-207ENST00000595560 DLGAP5Q15398 846 aa19.61■□□□□ 0.73
ZNF550-207ENST00000595560 TBC1D22AQ8WUA7 517 aa19.61■□□□□ 0.73
ZNF550-207ENST00000595560 IQSEC3Q9UPP2 1182 aaPredicted RBP19.61■□□□□ 0.73
ZNF550-207ENST00000595560 PAPPA2Q9BXP8 1791 aa19.6■□□□□ 0.73
ZNF550-207ENST00000595560 PNMA6EA0A0J9YXQ4 647 aa19.6■□□□□ 0.73
ZNF550-207ENST00000595560 FRAT2O75474 233 aaPredicted RBP19.6■□□□□ 0.73
ZNF550-207ENST00000595560 APOBEC3FQ8IUX4 373 aaKnown RBP19.6■□□□□ 0.73
ZNF550-207ENST00000595560 CAPNS2Q96L46 248 aa19.6■□□□□ 0.73
ZNF550-207ENST00000595560 GBA2Q9HCG7 927 aaPredicted RBP19.6■□□□□ 0.73
ZNF550-207ENST00000595560 COL1A1P02452 1464 aaPredicted RBP19.6■□□□□ 0.73
ZNF550-207ENST00000595560 SPDYE2BA6NHP3 402 aa19.59■□□□□ 0.73
ZNF550-207ENST00000595560 ZBTB7BO15156 539 aaPredicted RBP19.59■□□□□ 0.73
ZNF550-207ENST00000595560 SPDYE6P0CI01 402 aa19.59■□□□□ 0.73
ZNF550-207ENST00000595560 HSPA1AP0DMV8 641 aaKnown RBP19.59■□□□□ 0.73
ZNF550-207ENST00000595560 HSPA1BP0DMV9 641 aaKnown RBP19.59■□□□□ 0.73
ZNF550-207ENST00000595560 MS4A1P11836 297 aa19.59■□□□□ 0.73
ZNF550-207ENST00000595560 CFAP100Q494V2 611 aa19.59■□□□□ 0.73
ZNF550-207ENST00000595560 C2orf69Q8N8R5 385 aa19.59■□□□□ 0.73
ZNF550-207ENST00000595560 SERPINA10Q9UK55 444 aa19.59■□□□□ 0.73
ZNF550-207ENST00000595560 RCAN3Q9UKA8 241 aa19.59■□□□□ 0.73
ZNF550-207ENST00000595560 TTF2Q9UNY4 1162 aaKnown RBP19.59■□□□□ 0.73
ZNF550-207ENST00000595560 CHAF1AQ13111 956 aaPredicted RBP19.58■□□□□ 0.72
ZNF550-207ENST00000595560 CYP4F22Q6NT55 531 aa19.58■□□□□ 0.72
ZNF550-207ENST00000595560 PAXIP1Q6ZW49 1069 aaPredicted RBP19.58■□□□□ 0.72
ZNF550-207ENST00000595560 SCAF8Q9UPN6 1271 aaKnown RBP19.58■□□□□ 0.72
ZNF550-207ENST00000595560 ZBTB22O15209 634 aa19.57■□□□□ 0.72
ZNF550-207ENST00000595560 HUNKP57058 714 aa19.57■□□□□ 0.72
ZNF550-207ENST00000595560 POLA2Q14181 598 aa19.57■□□□□ 0.72
ZNF550-207ENST00000595560 PANK1Q8TE04 598 aa19.57■□□□□ 0.72
ZNF550-207ENST00000595560 PCDHAC2Q9Y5I4 1007 aa19.57■□□□□ 0.72
ZNF550-207ENST00000595560 MYO1BO43795 1136 aa19.56■□□□□ 0.72
ZNF550-207ENST00000595560 FKBP1BP68106 108 aa19.56■□□□□ 0.72
ZNF550-207ENST00000595560 TFCP2Q12800 502 aa19.56■□□□□ 0.72
ZNF550-207ENST00000595560 SSH3Q8TE77 659 aa19.56■□□□□ 0.72
ZNF550-207ENST00000595560 PRMT6Q96LA8 375 aaPredicted RBP19.56■□□□□ 0.72
ZNF550-207ENST00000595560 C1orf115Q9H7X2 142 aa19.56■□□□□ 0.72
ZNF550-207ENST00000595560 GNL3LQ9NVN8 582 aaKnown RBP19.56■□□□□ 0.72
ZNF550-207ENST00000595560 AKAP2Q9Y2D5 859 aa19.56■□□□□ 0.72
ZNF550-207ENST00000595560 SUGT1Q9Y2Z0 365 aa19.56■□□□□ 0.72
ZNF550-207ENST00000595560 SEMA3EO15041 775 aa19.55■□□□□ 0.72
ZNF550-207ENST00000595560 RBM5P52756 815 aaKnown RBP eCLIP19.55■□□□□ 0.72
ZNF550-207ENST00000595560 ATP8B2P98198 1209 aa19.55■□□□□ 0.72
ZNF550-207ENST00000595560 HDLBPQ00341 1268 aaKnown RBP19.55■□□□□ 0.72
ZNF550-207ENST00000595560 GRIK5Q16478 980 aa19.55■□□□□ 0.72
ZNF550-207ENST00000595560 WDR66Q8TBY9 1149 aa19.55■□□□□ 0.72
ZNF550-207ENST00000595560 ADORA1P30542 326 aa19.54■□□□□ 0.72
ZNF550-207ENST00000595560 PHKA1P46020 1223 aa19.54■□□□□ 0.72
ZNF550-207ENST00000595560 MAP2K1Q02750 393 aaPredicted RBP19.54■□□□□ 0.72
ZNF550-207ENST00000595560 GRM1Q13255 1194 aa19.54■□□□□ 0.72
ZNF550-207ENST00000595560 G3BP1Q13283 466 aaKnown RBP eCLIP19.54■□□□□ 0.72
ZNF550-207ENST00000595560 PPP2R3BQ9Y5P8 575 aa19.54■□□□□ 0.72
ZNF550-207ENST00000595560 MAST3O60307 1309 aa19.53■□□□□ 0.72
ZNF550-207ENST00000595560 AOX1Q06278 1338 aa19.53■□□□□ 0.72
ZNF550-207ENST00000595560 A0A1B0GUL7 405 aa19.53■□□□□ 0.72
ZNF550-207ENST00000595560 NF2P35240 595 aa19.53■□□□□ 0.72
ZNF550-207ENST00000595560 MAP2K2P36507 400 aa19.53■□□□□ 0.72
ZNF550-207ENST00000595560 CRKP46108 304 aa19.53■□□□□ 0.72
ZNF550-207ENST00000595560 MVPQ14764 893 aaKnown RBP19.53■□□□□ 0.72
ZNF550-207ENST00000595560 PRAMEF18Q5VWM3 479 aa19.53■□□□□ 0.72
ZNF550-207ENST00000595560 CCDC102BQ68D86 513 aa19.53■□□□□ 0.72
ZNF550-207ENST00000595560 RGMBQ6NW40 437 aa19.53■□□□□ 0.72
ZNF550-207ENST00000595560 MRIQ9BWK5 157 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms