RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 MYO1BO43795 1136 aa13.3□□□□□ -0.28
NOTCH3-203ENST00000595514 USP2O75604 605 aaPredicted RBP13.3□□□□□ -0.28
NOTCH3-203ENST00000595514 GTF2A2P52657 109 aa13.3□□□□□ -0.28
NOTCH3-203ENST00000595514 NFE2L2Q16236 605 aa13.3□□□□□ -0.28
NOTCH3-203ENST00000595514 NBPF12Q5TAG4 269 aaPredicted RBP13.3□□□□□ -0.28
NOTCH3-203ENST00000595514 TTLL5Q6EMB2 1281 aa13.3□□□□□ -0.28
NOTCH3-203ENST00000595514 CCDC85AQ96PX6 553 aaPredicted RBP13.3□□□□□ -0.28
NOTCH3-203ENST00000595514 COA1Q9GZY4 146 aa13.3□□□□□ -0.28
NOTCH3-203ENST00000595514 RNF208Q9H0X6 261 aa13.3□□□□□ -0.28
NOTCH3-203ENST00000595514 ZNF804BA4D1E1 1349 aa13.3□□□□□ -0.28
NOTCH3-203ENST00000595514 LAMB1P07942 1786 aa13.3□□□□□ -0.28
NOTCH3-203ENST00000595514 CCL5P13501 91 aa13.29□□□□□ -0.28
NOTCH3-203ENST00000595514 GRK4P32298 578 aa13.29□□□□□ -0.28
NOTCH3-203ENST00000595514 FAM43AQ8N2R8 423 aa13.29□□□□□ -0.28
NOTCH3-203ENST00000595514 ZBTB38Q8NAP3 1195 aaPredicted RBP13.29□□□□□ -0.28
NOTCH3-203ENST00000595514 RAET1EQ8TD07 263 aa13.29□□□□□ -0.28
NOTCH3-203ENST00000595514 MTMR10Q9NXD2 777 aa13.29□□□□□ -0.28
NOTCH3-203ENST00000595514 CLRN2A0PK11 232 aa13.28□□□□□ -0.28
NOTCH3-203ENST00000595514 ANP32CO43423 234 aa13.28□□□□□ -0.28
NOTCH3-203ENST00000595514 TLR2O60603 784 aa13.28□□□□□ -0.28
NOTCH3-203ENST00000595514 ECM2O94769 699 aaPredicted RBP13.28□□□□□ -0.28
NOTCH3-203ENST00000595514 HOXD10P28358 340 aa13.28□□□□□ -0.28
NOTCH3-203ENST00000595514 UBXN2AP68543 259 aa13.28□□□□□ -0.28
NOTCH3-203ENST00000595514 TRIM28Q13263 835 aaKnown RBP13.28□□□□□ -0.28
NOTCH3-203ENST00000595514 PLEKHF1Q96S99 279 aa13.28□□□□□ -0.28
NOTCH3-203ENST00000595514 VEZTQ9HBM0 779 aa13.28□□□□□ -0.28
NOTCH3-203ENST00000595514 PRDM6Q9NQX0 595 aa13.28□□□□□ -0.28
NOTCH3-203ENST00000595514 CHPF2Q9P2E5 772 aa13.28□□□□□ -0.28
NOTCH3-203ENST00000595514 BIN2Q9UBW5 565 aaPredicted RBP13.28□□□□□ -0.28
NOTCH3-203ENST00000595514 MAPK8IP3Q9UPT6 1336 aa13.28□□□□□ -0.28
NOTCH3-203ENST00000595514 GTF2IP78347 998 aa13.27□□□□□ -0.29
NOTCH3-203ENST00000595514 U2AF1L4Q8WU68 220 aaKnown RBP13.27□□□□□ -0.29
NOTCH3-203ENST00000595514 TRIM47Q96LD4 638 aa13.27□□□□□ -0.29
NOTCH3-203ENST00000595514 CDC5LQ99459 802 aaKnown RBP13.27□□□□□ -0.29
NOTCH3-203ENST00000595514 SRRDQ9UH36 339 aa13.27□□□□□ -0.29
NOTCH3-203ENST00000595514 RIPOR2Q9Y4F9 1068 aa13.27□□□□□ -0.29
NOTCH3-203ENST00000595514 ZNF646O15015 1829 aaPredicted RBP13.27□□□□□ -0.29
NOTCH3-203ENST00000595514 PDE8AO60658 829 aa13.26□□□□□ -0.29
NOTCH3-203ENST00000595514 BMP8BP34820 402 aa13.26□□□□□ -0.29
NOTCH3-203ENST00000595514 CCT4P50991 539 aaKnown RBP13.26□□□□□ -0.29
NOTCH3-203ENST00000595514 RASA3Q14644 834 aa13.26□□□□□ -0.29
NOTCH3-203ENST00000595514 CCDC184Q52MB2 194 aa13.26□□□□□ -0.29
NOTCH3-203ENST00000595514 MTMR14Q8NCE2 650 aa13.26□□□□□ -0.29
NOTCH3-203ENST00000595514 CNKSR2Q8WXI2 1034 aa13.26□□□□□ -0.29
NOTCH3-203ENST00000595514 BABAM1Q9NWV8 329 aa13.26□□□□□ -0.29
NOTCH3-203ENST00000595514 PSMC4P43686 418 aa13.25□□□□□ -0.29
NOTCH3-203ENST00000595514 LRIT3Q3SXY7 679 aa13.25□□□□□ -0.29
NOTCH3-203ENST00000595514 HELBQ8NG08 1087 aaPredicted RBP13.25□□□□□ -0.29
NOTCH3-203ENST00000595514 GDF15Q99988 308 aa13.25□□□□□ -0.29
NOTCH3-203ENST00000595514 PNNQ9H307 717 aaKnown RBP13.25□□□□□ -0.29
NOTCH3-203ENST00000595514 ZCCHC17Q9NP64 241 aaKnown RBP13.25□□□□□ -0.29
NOTCH3-203ENST00000595514 MINPP1Q9UNW1 487 aa13.25□□□□□ -0.29
NOTCH3-203ENST00000595514 CSADQ9Y600 493 aa13.25□□□□□ -0.29
NOTCH3-203ENST00000595514 SPTBN5Q9NRC6 3674 aaKnown RBP13.25□□□□□ -0.29
NOTCH3-203ENST00000595514 MYPNQ86TC9 1320 aa13.24□□□□□ -0.29
NOTCH3-203ENST00000595514 SPDYE2BA6NHP3 402 aa13.24□□□□□ -0.29
NOTCH3-203ENST00000595514 FMNL1O95466 1100 aaPredicted RBP13.24□□□□□ -0.29
NOTCH3-203ENST00000595514 SPDYE6P0CI01 402 aa13.24□□□□□ -0.29
NOTCH3-203ENST00000595514 CETPP11597 493 aa13.24□□□□□ -0.29
NOTCH3-203ENST00000595514 CFAP100Q494V2 611 aa13.24□□□□□ -0.29
NOTCH3-203ENST00000595514 HDGFL1Q5TGJ6 251 aa13.24□□□□□ -0.29
NOTCH3-203ENST00000595514 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.24□□□□□ -0.29
NOTCH3-203ENST00000595514 TXNRD3Q86VQ6 643 aa13.24□□□□□ -0.29
NOTCH3-203ENST00000595514 PCDHAC2Q9Y5I4 1007 aa13.24□□□□□ -0.29
NOTCH3-203ENST00000595514 RPTORQ8N122 1335 aa13.23□□□□□ -0.29
NOTCH3-203ENST00000595514 SGPL1O95470 568 aa13.23□□□□□ -0.29
NOTCH3-203ENST00000595514 OSBPP22059 807 aa13.23□□□□□ -0.29
NOTCH3-203ENST00000595514 BCAMP50895 628 aa13.23□□□□□ -0.29
NOTCH3-203ENST00000595514 MAP3K9P80192 1104 aa13.23□□□□□ -0.29
NOTCH3-203ENST00000595514 VGLL4Q14135 290 aa13.23□□□□□ -0.29
NOTCH3-203ENST00000595514 BSDC1Q9NW68 430 aaPredicted RBP13.23□□□□□ -0.29
NOTCH3-203ENST00000595514 DBF4Q9UBU7 674 aaPredicted RBP13.23□□□□□ -0.29
NOTCH3-203ENST00000595514 LEMD3Q9Y2U8 911 aa13.23□□□□□ -0.29
NOTCH3-203ENST00000595514 BTBD19C9JJ37 291 aa13.22□□□□□ -0.29
NOTCH3-203ENST00000595514 F8W031 263 aaPredicted RBP13.22□□□□□ -0.29
NOTCH3-203ENST00000595514 TFRCP02786 760 aaKnown RBP13.22□□□□□ -0.29
NOTCH3-203ENST00000595514 PCCAP05165 728 aaPredicted RBP13.22□□□□□ -0.29
NOTCH3-203ENST00000595514 CAPN2P17655 700 aa13.22□□□□□ -0.29
NOTCH3-203ENST00000595514 CTGFP29279 349 aa13.22□□□□□ -0.29
NOTCH3-203ENST00000595514 TNFAIP1Q13829 316 aa13.22□□□□□ -0.29
NOTCH3-203ENST00000595514 RIC3Q7Z5B4 369 aa13.22□□□□□ -0.29
NOTCH3-203ENST00000595514 TDHQ8IZJ6 230 aa13.22□□□□□ -0.29
NOTCH3-203ENST00000595514 PRMT6Q96LA8 375 aaPredicted RBP13.22□□□□□ -0.29
NOTCH3-203ENST00000595514 UNC93B1Q9H1C4 597 aa13.22□□□□□ -0.29
NOTCH3-203ENST00000595514 CPA4Q9UI42 421 aa13.22□□□□□ -0.29
NOTCH3-203ENST00000595514 ZSWIM8A7E2V4 1837 aa13.21□□□□□ -0.29
NOTCH3-203ENST00000595514 RBM5P52756 815 aaKnown RBP eCLIP13.21□□□□□ -0.29
NOTCH3-203ENST00000595514 RIPK4P57078 832 aa13.21□□□□□ -0.29
NOTCH3-203ENST00000595514 GOLGA2Q08379 1002 aa13.21□□□□□ -0.29
NOTCH3-203ENST00000595514 KRT24Q2M2I5 525 aa13.21□□□□□ -0.29
NOTCH3-203ENST00000595514 C17orf99Q6UX52 265 aa13.21□□□□□ -0.29
NOTCH3-203ENST00000595514 CCDC191Q8NCU4 936 aa13.21□□□□□ -0.29
NOTCH3-203ENST00000595514 SLAIN1Q8ND83 568 aa13.21□□□□□ -0.29
NOTCH3-203ENST00000595514 JARID2Q92833 1246 aaPredicted RBP13.21□□□□□ -0.29
NOTCH3-203ENST00000595514 HYPKQ9NX55 129 aa13.21□□□□□ -0.29
NOTCH3-203ENST00000595514 ZMYND8Q9ULU4 1186 aaPredicted RBP13.21□□□□□ -0.29
NOTCH3-203ENST00000595514 SPDYE5A6NIY4 337 aa13.2□□□□□ -0.3
NOTCH3-203ENST00000595514 KLRK1P26718 216 aa13.2□□□□□ -0.3
NOTCH3-203ENST00000595514 CTSWP56202 376 aa13.2□□□□□ -0.3
NOTCH3-203ENST00000595514 PRKCZQ05513 592 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms