RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 NCBP3Q53F19 620 aaKnown RBP23.72■■□□□ 1.39
PDE4C-208ENST00000595343 FBXO46Q6PJ61 603 aaPredicted RBP23.72■■□□□ 1.39
PDE4C-208ENST00000595343 PCDHAC2Q9Y5I4 1007 aa23.72■■□□□ 1.39
PDE4C-208ENST00000595343 CACNA1FO60840 1977 aa23.71■■□□□ 1.39
PDE4C-208ENST00000595343 IL1R1P14778 569 aa23.71■■□□□ 1.39
PDE4C-208ENST00000595343 MAP3K11Q16584 847 aa23.71■■□□□ 1.39
PDE4C-208ENST00000595343 SLC10A4Q96EP9 437 aa23.71■■□□□ 1.39
PDE4C-208ENST00000595343 F8W031 263 aaPredicted RBP23.7■■□□□ 1.38
PDE4C-208ENST00000595343 ALDH1A1P00352 501 aa23.7■■□□□ 1.38
PDE4C-208ENST00000595343 ZNF804AQ7Z570 1209 aa23.7■■□□□ 1.38
PDE4C-208ENST00000595343 CHMP3Q9Y3E7 222 aa23.7■■□□□ 1.38
PDE4C-208ENST00000595343 PPP2R3BQ9Y5P8 575 aa23.7■■□□□ 1.38
PDE4C-208ENST00000595343 SSC5DA1L4H1 1573 aa23.69■■□□□ 1.38
PDE4C-208ENST00000595343 MANSC4A6NHS7 340 aaPredicted RBP23.69■■□□□ 1.38
PDE4C-208ENST00000595343 PPP1R12BO60237 982 aaPredicted RBP23.69■■□□□ 1.38
PDE4C-208ENST00000595343 INHBEP58166 350 aa23.69■■□□□ 1.38
PDE4C-208ENST00000595343 CFAP100Q494V2 611 aa23.69■■□□□ 1.38
PDE4C-208ENST00000595343 BEND3Q5T5X7 828 aa23.69■■□□□ 1.38
PDE4C-208ENST00000595343 PRPF38BQ5VTL8 546 aaKnown RBP23.69■■□□□ 1.38
PDE4C-208ENST00000595343 CLMNQ96JQ2 1002 aa23.69■■□□□ 1.38
PDE4C-208ENST00000595343 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.69■■□□□ 1.38
PDE4C-208ENST00000595343 A0A1B0GUL6 1792 aa23.68■■□□□ 1.38
PDE4C-208ENST00000595343 CLRN2A0PK11 232 aa23.68■■□□□ 1.38
PDE4C-208ENST00000595343 SPDYE2BA6NHP3 402 aa23.68■■□□□ 1.38
PDE4C-208ENST00000595343 F6X3S4 739 aa23.68■■□□□ 1.38
PDE4C-208ENST00000595343 MYO1BO43795 1136 aa23.68■■□□□ 1.38
PDE4C-208ENST00000595343 SPDYE6P0CI01 402 aa23.68■■□□□ 1.38
PDE4C-208ENST00000595343 FKBP1AP62942 108 aaKnown RBP23.68■■□□□ 1.38
PDE4C-208ENST00000595343 PRMT6Q96LA8 375 aaPredicted RBP23.68■■□□□ 1.38
PDE4C-208ENST00000595343 ZBTB48P10074 688 aaPredicted RBP23.67■■□□□ 1.38
PDE4C-208ENST00000595343 EXOSC9Q06265 439 aaKnown RBP23.67■■□□□ 1.38
PDE4C-208ENST00000595343 LMBR1LQ6UX01 489 aa23.67■■□□□ 1.38
PDE4C-208ENST00000595343 IFNL1Q8IU54 200 aa23.67■■□□□ 1.38
PDE4C-208ENST00000595343 WNK4Q96J92 1243 aa23.67■■□□□ 1.38
PDE4C-208ENST00000595343 PCDH10Q9P2E7 1040 aa23.67■■□□□ 1.38
PDE4C-208ENST00000595343 JAG2Q9Y219 1238 aa23.67■■□□□ 1.38
PDE4C-208ENST00000595343 ECM29Q5VYK3 1845 aa23.67■■□□□ 1.38
PDE4C-208ENST00000595343 SUPT20HL1Q3ZLR7 823 aa23.66■■□□□ 1.38
PDE4C-208ENST00000595343 EPHA10Q5JZY3 1008 aa23.66■■□□□ 1.38
PDE4C-208ENST00000595343 WDR63Q8IWG1 891 aa23.66■■□□□ 1.38
PDE4C-208ENST00000595343 ZNF594Q96JF6 807 aaPredicted RBP23.66■■□□□ 1.38
PDE4C-208ENST00000595343 VEZTQ9HBM0 779 aa23.66■■□□□ 1.38
PDE4C-208ENST00000595343 AOX1Q06278 1338 aa23.65■■□□□ 1.38
PDE4C-208ENST00000595343 UNCXA6NJT0 531 aa23.65■■□□□ 1.38
PDE4C-208ENST00000595343 CCDC57Q2TAC2 916 aa23.65■■□□□ 1.38
PDE4C-208ENST00000595343 NBPF12Q5TAG4 269 aaPredicted RBP23.65■■□□□ 1.38
PDE4C-208ENST00000595343 LDHAL6AQ6ZMR3 332 aa23.65■■□□□ 1.38
PDE4C-208ENST00000595343 SALL2Q9Y467 1007 aaPredicted RBP23.65■■□□□ 1.38
PDE4C-208ENST00000595343 IGF2BP3O00425 579 aaKnown RBP eCLIP23.64■■□□□ 1.37
PDE4C-208ENST00000595343 PLIN1O60240 522 aa23.64■■□□□ 1.37
PDE4C-208ENST00000595343 TAF7LQ5H9L4 462 aa23.64■■□□□ 1.37
PDE4C-208ENST00000595343 RBM5P52756 815 aaKnown RBP eCLIP23.63■■□□□ 1.37
PDE4C-208ENST00000595343 CNNM1Q9NRU3 951 aa23.63■■□□□ 1.37
PDE4C-208ENST00000595343 GRM8O00222 908 aa23.62■■□□□ 1.37
PDE4C-208ENST00000595343 USP2O75604 605 aaPredicted RBP23.62■■□□□ 1.37
PDE4C-208ENST00000595343 IREB2P48200 963 aaKnown RBP23.62■■□□□ 1.37
PDE4C-208ENST00000595343 RASA3Q14644 834 aa23.62■■□□□ 1.37
PDE4C-208ENST00000595343 MRS2Q9HD23 443 aa23.62■■□□□ 1.37
PDE4C-208ENST00000595343 TRIM17Q9Y577 477 aa23.62■■□□□ 1.37
PDE4C-208ENST00000595343 FAM205AQ6ZU69 1335 aa23.61■■□□□ 1.37
PDE4C-208ENST00000595343 LAMB1P07942 1786 aa23.61■■□□□ 1.37
PDE4C-208ENST00000595343 OTOP1Q7RTM1 612 aa23.61■■□□□ 1.37
PDE4C-208ENST00000595343 GJA5P36382 358 aa23.6■■□□□ 1.37
PDE4C-208ENST00000595343 ANKRD13AQ8IZ07 590 aa23.6■■□□□ 1.37
PDE4C-208ENST00000595343 TDRD7Q8NHU6 1098 aaKnown RBP23.6■■□□□ 1.37
PDE4C-208ENST00000595343 SPINK5Q9NQ38 1064 aaPredicted RBP23.6■■□□□ 1.37
PDE4C-208ENST00000595343 MFSD14BQ5SR56 506 aa23.59■■□□□ 1.37
PDE4C-208ENST00000595343 C9orf78Q9NZ63 289 aaPredicted RBP23.59■■□□□ 1.37
PDE4C-208ENST00000595343 CRHR2Q13324 411 aa23.58■■□□□ 1.37
PDE4C-208ENST00000595343 TNFAIP1Q13829 316 aa23.58■■□□□ 1.37
PDE4C-208ENST00000595343 UBE4AQ14139 1066 aa23.58■■□□□ 1.37
PDE4C-208ENST00000595343 SPDYE2Q495Y8 402 aa23.58■■□□□ 1.37
PDE4C-208ENST00000595343 OTUD7BQ6GQQ9 843 aa23.58■■□□□ 1.37
PDE4C-208ENST00000595343 ZNF70Q9UC06 446 aaPredicted RBP23.58■■□□□ 1.37
PDE4C-208ENST00000595343 SERPINA10Q9UK55 444 aa23.58■■□□□ 1.37
PDE4C-208ENST00000595343 TTF2Q9UNY4 1162 aaKnown RBP23.58■■□□□ 1.37
PDE4C-208ENST00000595343 HTTP42858 3142 aa23.57■■□□□ 1.36
PDE4C-208ENST00000595343 ALDH1L1O75891 902 aa23.57■■□□□ 1.36
PDE4C-208ENST00000595343 HIBADHP31937 336 aaKnown RBP23.57■■□□□ 1.36
PDE4C-208ENST00000595343 GYG1P46976 350 aa23.57■■□□□ 1.36
PDE4C-208ENST00000595343 ERO1AQ96HE7 468 aa23.57■■□□□ 1.36
PDE4C-208ENST00000595343 FAM84BQ96KN1 310 aaPredicted RBP23.57■■□□□ 1.36
PDE4C-208ENST00000595343 PTPN18Q99952 460 aa23.57■■□□□ 1.36
PDE4C-208ENST00000595343 TDRD3Q9H7E2 651 aaKnown RBP23.57■■□□□ 1.36
PDE4C-208ENST00000595343 TESPA1A2RU30 521 aaPredicted RBP23.56■■□□□ 1.36
PDE4C-208ENST00000595343 SLC4A10Q6U841 1118 aa23.56■■□□□ 1.36
PDE4C-208ENST00000595343 PUS3Q9BZE2 481 aaKnown RBP23.56■■□□□ 1.36
PDE4C-208ENST00000595343 INTS3Q68E01 1043 aaKnown RBP23.55■■□□□ 1.36
PDE4C-208ENST00000595343 DZIP1LQ8IYY4 767 aaKnown RBP23.55■■□□□ 1.36
PDE4C-208ENST00000595343 CD99L2Q8TCZ2 262 aa23.55■■□□□ 1.36
PDE4C-208ENST00000595343 TEPSINQ96N21 525 aa23.55■■□□□ 1.36
PDE4C-208ENST00000595343 SRCIN1Q9C0H9 1055 aa23.55■■□□□ 1.36
PDE4C-208ENST00000595343 ELP3Q9H9T3 547 aa23.55■■□□□ 1.36
PDE4C-208ENST00000595343 PTPN22Q9Y2R2 807 aa23.55■■□□□ 1.36
PDE4C-208ENST00000595343 CDAN1Q8IWY9 1227 aa23.54■■□□□ 1.36
PDE4C-208ENST00000595343 OPTNQ96CV9 577 aa23.54■■□□□ 1.36
PDE4C-208ENST00000595343 KAZALD1Q96I82 304 aa23.54■■□□□ 1.36
PDE4C-208ENST00000595343 SUCLG2Q96I99 432 aa23.54■■□□□ 1.36
PDE4C-208ENST00000595343 OTOFQ9HC10 1997 aa23.53■■□□□ 1.36
PDE4C-208ENST00000595343 POTEFA5A3E0 1075 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms