RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 BOLA2Q9H3K6 86 aa13.21□□□□□ -0.29
USE1-204ENST00000594399 DENND2AQ9ULE3 1009 aa13.21□□□□□ -0.29
USE1-204ENST00000594399 IQSEC3Q9UPP2 1182 aaPredicted RBP13.21□□□□□ -0.29
USE1-204ENST00000594399 AKAP11Q9UKA4 1901 aa13.21□□□□□ -0.3
USE1-204ENST00000594399 TIAM2Q8IVF5 1701 aa13.2□□□□□ -0.3
USE1-204ENST00000594399 GSPT1P15170 499 aaKnown RBP13.2□□□□□ -0.3
USE1-204ENST00000594399 BMP2KLQ5H9B9 411 aa13.2□□□□□ -0.3
USE1-204ENST00000594399 C9orf131Q5VYM1 1079 aa13.2□□□□□ -0.3
USE1-204ENST00000594399 PODNQ7Z5L7 613 aa13.2□□□□□ -0.3
USE1-204ENST00000594399 NIM1KQ8IY84 436 aa13.2□□□□□ -0.3
USE1-204ENST00000594399 SPATA5Q8NB90 893 aa13.2□□□□□ -0.3
USE1-204ENST00000594399 DBNDD1Q9H9R9 158 aa13.2□□□□□ -0.3
USE1-204ENST00000594399 HMG20BQ9P0W2 317 aa13.2□□□□□ -0.3
USE1-204ENST00000594399 PSME4Q14997 1843 aa13.19□□□□□ -0.3
USE1-204ENST00000594399 LMNB1P20700 586 aa13.19□□□□□ -0.3
USE1-204ENST00000594399 ZAP70P43403 619 aa13.19□□□□□ -0.3
USE1-204ENST00000594399 C1QTNF8P60827 252 aa13.19□□□□□ -0.3
USE1-204ENST00000594399 PI16Q6UXB8 463 aa13.19□□□□□ -0.3
USE1-204ENST00000594399 ZNF526Q8TF50 670 aaPredicted RBP13.19□□□□□ -0.3
USE1-204ENST00000594399 SNRKQ9NRH2 765 aa13.19□□□□□ -0.3
USE1-204ENST00000594399 PAG1Q9NWQ8 432 aa13.19□□□□□ -0.3
USE1-204ENST00000594399 NDUFB9Q9Y6M9 179 aa13.19□□□□□ -0.3
USE1-204ENST00000594399 MAST2Q6P0Q8 1798 aa13.19□□□□□ -0.3
USE1-204ENST00000594399 ZNF646O15015 1829 aaPredicted RBP13.18□□□□□ -0.3
USE1-204ENST00000594399 DOCK2Q92608 1830 aa13.18□□□□□ -0.3
USE1-204ENST00000594399 AK9Q5TCS8 1911 aa13.18□□□□□ -0.3
USE1-204ENST00000594399 TRIM6-TRIM34B2RNG4 842 aa13.18□□□□□ -0.3
USE1-204ENST00000594399 GOLIM4O00461 696 aa13.18□□□□□ -0.3
USE1-204ENST00000594399 MAP4K4O95819 1239 aaPredicted RBP13.18□□□□□ -0.3
USE1-204ENST00000594399 CHAF1AQ13111 956 aaPredicted RBP13.18□□□□□ -0.3
USE1-204ENST00000594399 CNTROBQ8N137 903 aa13.18□□□□□ -0.3
USE1-204ENST00000594399 JDP2Q8WYK2 163 aa13.18□□□□□ -0.3
USE1-204ENST00000594399 RNF181Q9P0P0 153 aa13.18□□□□□ -0.3
USE1-204ENST00000594399 DICER1Q9UPY3 1922 aaKnown RBP13.17□□□□□ -0.3
USE1-204ENST00000594399 FAM205AQ6ZU69 1335 aa13.17□□□□□ -0.3
USE1-204ENST00000594399 SALL1Q9NSC2 1324 aa13.17□□□□□ -0.3
USE1-204ENST00000594399 SBF1O95248 1867 aa13.17□□□□□ -0.3
USE1-204ENST00000594399 PRELPP51888 382 aa13.17□□□□□ -0.3
USE1-204ENST00000594399 TTF1Q15361 905 aaPredicted RBP13.17□□□□□ -0.3
USE1-204ENST00000594399 WDR66Q8TBY9 1149 aa13.17□□□□□ -0.3
USE1-204ENST00000594399 FBXW7Q969H0 707 aa13.17□□□□□ -0.3
USE1-204ENST00000594399 EVI5LQ96CN4 794 aa13.17□□□□□ -0.3
USE1-204ENST00000594399 ZNRF3Q9ULT6 936 aa13.17□□□□□ -0.3
USE1-204ENST00000594399 SCN9AQ15858 1988 aa13.17□□□□□ -0.3
USE1-204ENST00000594399 RFX7Q2KHR2 1363 aa13.17□□□□□ -0.3
USE1-204ENST00000594399 CCDC88AQ3V6T2 1871 aa13.16□□□□□ -0.3
USE1-204ENST00000594399 USP17L3A6NCW0 530 aa13.16□□□□□ -0.3
USE1-204ENST00000594399 USP17L4A6NCW7 530 aa13.16□□□□□ -0.3
USE1-204ENST00000594399 CYP2E1P05181 493 aaPredicted RBP13.16□□□□□ -0.3
USE1-204ENST00000594399 SDSP20132 328 aa13.16□□□□□ -0.3
USE1-204ENST00000594399 GTF2IP78347 998 aa13.16□□□□□ -0.3
USE1-204ENST00000594399 USP17L1Q7RTZ2 530 aa13.16□□□□□ -0.3
USE1-204ENST00000594399 ZGPATQ8N5A5 531 aaKnown RBP13.16□□□□□ -0.3
USE1-204ENST00000594399 TBC1D22AQ8WUA7 517 aa13.16□□□□□ -0.3
USE1-204ENST00000594399 RILPL2Q969X0 211 aa13.16□□□□□ -0.3
USE1-204ENST00000594399 EDC3Q96F86 508 aaKnown RBP13.16□□□□□ -0.3
USE1-204ENST00000594399 PIH1D3Q9NQM4 214 aaKnown RBP13.16□□□□□ -0.3
USE1-204ENST00000594399 JAG2Q9Y219 1238 aa13.16□□□□□ -0.3
USE1-204ENST00000594399 ZC3H4Q9UPT8 1303 aaKnown RBP13.15□□□□□ -0.3
USE1-204ENST00000594399 YDJCA8MPS7 323 aa13.15□□□□□ -0.3
USE1-204ENST00000594399 STRIP1Q5VSL9 837 aa13.15□□□□□ -0.3
USE1-204ENST00000594399 KBTBD3Q8NAB2 608 aa13.15□□□□□ -0.3
USE1-204ENST00000594399 FSD1Q9BTV5 496 aa13.15□□□□□ -0.3
USE1-204ENST00000594399 ANTXR1Q9H6X2 564 aa13.15□□□□□ -0.3
USE1-204ENST00000594399 ABCF2Q9UG63 623 aa13.15□□□□□ -0.3
USE1-204ENST00000594399 MYH7P12883 1935 aa13.15□□□□□ -0.3
USE1-204ENST00000594399 FKBP1AP62942 108 aaKnown RBP13.14□□□□□ -0.31
USE1-204ENST00000594399 LRRFIP1Q32MZ4 808 aaKnown RBP13.14□□□□□ -0.31
USE1-204ENST00000594399 MFSD14BQ5SR56 506 aa13.14□□□□□ -0.31
USE1-204ENST00000594399 TTLL5Q6EMB2 1281 aa13.14□□□□□ -0.31
USE1-204ENST00000594399 TBC1D9Q6ZT07 1266 aa13.14□□□□□ -0.31
USE1-204ENST00000594399 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.14□□□□□ -0.31
USE1-204ENST00000594399 IDH1O75874 414 aaKnown RBP13.13□□□□□ -0.31
USE1-204ENST00000594399 RAD17O75943 681 aa13.13□□□□□ -0.31
USE1-204ENST00000594399 PRDX5P30044 214 aa13.13□□□□□ -0.31
USE1-204ENST00000594399 EIF6P56537 245 aaKnown RBP13.13□□□□□ -0.31
USE1-204ENST00000594399 MAP3K12Q12852 859 aa13.13□□□□□ -0.31
USE1-204ENST00000594399 DACT2Q5SW24 774 aa13.13□□□□□ -0.31
USE1-204ENST00000594399 SPTY2D1Q68D10 685 aaPredicted RBP13.13□□□□□ -0.31
USE1-204ENST00000594399 KCNQ5Q9NR82 932 aa13.13□□□□□ -0.31
USE1-204ENST00000594399 LRP2BPQ9P2M1 347 aa13.13□□□□□ -0.31
USE1-204ENST00000594399 MYO3BQ8WXR4 1341 aa13.13□□□□□ -0.31
USE1-204ENST00000594399 MYO5AQ9Y4I1 1855 aaKnown RBP13.12□□□□□ -0.31
USE1-204ENST00000594399 FZD9O00144 591 aa13.12□□□□□ -0.31
USE1-204ENST00000594399 PSMD14O00487 310 aa13.12□□□□□ -0.31
USE1-204ENST00000594399 IGSF3O75054 1194 aa13.12□□□□□ -0.31
USE1-204ENST00000594399 CDC45O75419 566 aa13.12□□□□□ -0.31
USE1-204ENST00000594399 LDHBP07195 334 aaKnown RBP13.12□□□□□ -0.31
USE1-204ENST00000594399 TNIP1Q15025 636 aa13.12□□□□□ -0.31
USE1-204ENST00000594399 CIAPIN1Q6FI81 312 aa13.12□□□□□ -0.31
USE1-204ENST00000594399 ZSCAN25Q6NSZ9 544 aa13.12□□□□□ -0.31
USE1-204ENST00000594399 ERICH6Q7L0X2 663 aa13.12□□□□□ -0.31
USE1-204ENST00000594399 TICAM2Q86XR7 235 aa13.12□□□□□ -0.31
USE1-204ENST00000594399 DZIP1Q86YF9 867 aaKnown RBP13.12□□□□□ -0.31
USE1-204ENST00000594399 CERS5Q8N5B7 392 aa13.12□□□□□ -0.31
USE1-204ENST00000594399 RAI14Q9P0K7 980 aa13.12□□□□□ -0.31
USE1-204ENST00000594399 SUGT1Q9Y2Z0 365 aa13.12□□□□□ -0.31
USE1-204ENST00000594399 MAST3O60307 1309 aa13.12□□□□□ -0.31
USE1-204ENST00000594399 ZNF541Q9H0D2 1346 aa13.12□□□□□ -0.31
USE1-204ENST00000594399 HIP1O00291 1037 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms