RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 HIBADHP31937 336 aaKnown RBP15.89■□□□□ 0.13
VRK3-205ENST00000593919 PTH1RQ03431 593 aa15.89■□□□□ 0.13
VRK3-205ENST00000593919 R3HDM1Q15032 1099 aaKnown RBP15.89■□□□□ 0.13
VRK3-205ENST00000593919 LRRFIP1Q32MZ4 808 aaKnown RBP15.89■□□□□ 0.13
VRK3-205ENST00000593919 ZMYM1Q5SVZ6 1142 aa15.89■□□□□ 0.13
VRK3-205ENST00000593919 STYK1Q6J9G0 422 aa15.89■□□□□ 0.13
VRK3-205ENST00000593919 GPR101Q96P66 508 aaPredicted RBP15.89■□□□□ 0.13
VRK3-205ENST00000593919 GGA1Q9UJY5 639 aa15.89■□□□□ 0.13
VRK3-205ENST00000593919 CCDC171Q6TFL3 1326 aa15.88■□□□□ 0.13
VRK3-205ENST00000593919 DUOX1Q9NRD9 1551 aa15.88■□□□□ 0.13
VRK3-205ENST00000593919 IDH1O75874 414 aaKnown RBP15.88■□□□□ 0.13
VRK3-205ENST00000593919 ZFYP08048 801 aaPredicted RBP15.88■□□□□ 0.13
VRK3-205ENST00000593919 ATP2B4P23634 1241 aa15.88■□□□□ 0.13
VRK3-205ENST00000593919 MCMDC2Q4G0Z9 681 aa15.88■□□□□ 0.13
VRK3-205ENST00000593919 PPP4R3CPQ6ZMV5 832 aa15.88■□□□□ 0.13
VRK3-205ENST00000593919 CCDC129Q6ZRS4 1044 aa15.88■□□□□ 0.13
VRK3-205ENST00000593919 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.88■□□□□ 0.132e-7■■■□□ 18.9
VRK3-205ENST00000593919 OLFM4Q6UX06 510 aa15.87■□□□□ 0.13
VRK3-205ENST00000593919 HELLSQ9NRZ9 838 aa15.87■□□□□ 0.13
VRK3-205ENST00000593919 POLLQ9UGP5 575 aa15.87■□□□□ 0.13
VRK3-205ENST00000593919 MCCP23508 829 aa15.87■□□□□ 0.13
VRK3-205ENST00000593919 PRPF40BQ6NWY9 871 aaKnown RBP15.87■□□□□ 0.13
VRK3-205ENST00000593919 C15orf52Q6ZUT6 534 aaKnown RBP15.87■□□□□ 0.13
VRK3-205ENST00000593919 KLHL34Q8N239 644 aa15.87■□□□□ 0.13
VRK3-205ENST00000593919 TBC1D16Q8TBP0 767 aa15.87■□□□□ 0.13
VRK3-205ENST00000593919 OSBP2Q969R2 916 aa15.87■□□□□ 0.13
VRK3-205ENST00000593919 SNX21Q969T3 373 aa15.87■□□□□ 0.13
VRK3-205ENST00000593919 MTFR1LQ9H019 292 aa15.87■□□□□ 0.13
VRK3-205ENST00000593919 DENND2AQ9ULE3 1009 aa15.87■□□□□ 0.13
VRK3-205ENST00000593919 PALD1Q9ULE6 856 aa15.87■□□□□ 0.13
VRK3-205ENST00000593919 MAST3O60307 1309 aa15.87■□□□□ 0.13
VRK3-205ENST00000593919 SEMA3EO15041 775 aa15.86■□□□□ 0.13
VRK3-205ENST00000593919 HSPA4P34932 840 aa15.86■□□□□ 0.13
VRK3-205ENST00000593919 ADD2P35612 726 aa15.86■□□□□ 0.13
VRK3-205ENST00000593919 SLC9C2Q5TAH2 1124 aa15.86■□□□□ 0.13
VRK3-205ENST00000593919 WWC3Q9ULE0 1092 aa15.86■□□□□ 0.13
VRK3-205ENST00000593919 ATF5Q9Y2D1 282 aaPredicted RBP15.86■□□□□ 0.13
VRK3-205ENST00000593919 CCDC88AQ3V6T2 1871 aa15.86■□□□□ 0.13
VRK3-205ENST00000593919 CHD4Q14839 1912 aa15.86■□□□□ 0.13
VRK3-205ENST00000593919 WASHC4Q2M389 1173 aa15.86■□□□□ 0.13
VRK3-205ENST00000593919 ZSCAN25Q6NSZ9 544 aa15.86■□□□□ 0.13
VRK3-205ENST00000593919 C6orf229H3BNL8 230 aa15.85■□□□□ 0.13
VRK3-205ENST00000593919 M0R2C6 588 aa15.85■□□□□ 0.13
VRK3-205ENST00000593919 PDE6AP16499 860 aa15.85■□□□□ 0.13
VRK3-205ENST00000593919 MAP3K12Q12852 859 aa15.85■□□□□ 0.13
VRK3-205ENST00000593919 ZNF804AQ7Z570 1209 aa15.85■□□□□ 0.13
VRK3-205ENST00000593919 APPBP2Q92624 585 aa15.85■□□□□ 0.13
VRK3-205ENST00000593919 MAP4K1Q92918 833 aa15.85■□□□□ 0.13
VRK3-205ENST00000593919 CNKSR1Q969H4 720 aa15.85■□□□□ 0.13
VRK3-205ENST00000593919 PDS5AQ29RF7 1337 aaKnown RBP15.85■□□□□ 0.13
VRK3-205ENST00000593919 MPNDQ8N594 471 aa15.84■□□□□ 0.13
VRK3-205ENST00000593919 PUS7LQ9H0K6 701 aaKnown RBP15.84■□□□□ 0.13
VRK3-205ENST00000593919 KIAA1551Q9HCM1 1747 aa15.84■□□□□ 0.13
VRK3-205ENST00000593919 TCRBV5S4A2TA0A5A2 114 aa15.84■□□□□ 0.13
VRK3-205ENST00000593919 PSDA5PKW4 1024 aaPredicted RBP15.84■□□□□ 0.13
VRK3-205ENST00000593919 ANAPC15P60006 121 aa15.84■□□□□ 0.13
VRK3-205ENST00000593919 UBE3CQ15386 1083 aa15.84■□□□□ 0.13
VRK3-205ENST00000593919 TMX4Q9H1E5 349 aaPredicted RBP15.84■□□□□ 0.13
VRK3-205ENST00000593919 CHMP5Q9NZZ3 219 aa15.84■□□□□ 0.13
VRK3-205ENST00000593919 LRP2BPQ9P2M1 347 aa15.84■□□□□ 0.13
VRK3-205ENST00000593919 ABCF2Q9UG63 623 aa15.84■□□□□ 0.13
VRK3-205ENST00000593919 RBM8AQ9Y5S9 174 aaKnown RBP15.84■□□□□ 0.13
VRK3-205ENST00000593919 ZNF532Q9HCE3 1301 aa15.83■□□□□ 0.13
VRK3-205ENST00000593919 CD2BP2O95400 341 aaKnown RBP15.83■□□□□ 0.12
VRK3-205ENST00000593919 POLD1P28340 1107 aa15.83■□□□□ 0.12
VRK3-205ENST00000593919 DPP8Q6V1X1 898 aaPredicted RBP15.83■□□□□ 0.12
VRK3-205ENST00000593919 MAGEB6Q8N7X4 407 aa15.83■□□□□ 0.12
VRK3-205ENST00000593919 CHAF1AQ13111 956 aaPredicted RBP15.82■□□□□ 0.12
VRK3-205ENST00000593919 GSE1Q14687 1217 aa15.82■□□□□ 0.12
VRK3-205ENST00000593919 NECTIN1Q15223 517 aa15.82■□□□□ 0.12
VRK3-205ENST00000593919 RABEP1Q15276 862 aa15.82■□□□□ 0.12
VRK3-205ENST00000593919 VPS53Q5VIR6 699 aa15.82■□□□□ 0.12
VRK3-205ENST00000593919 TDRD7Q8NHU6 1098 aaKnown RBP15.82■□□□□ 0.12
VRK3-205ENST00000593919 MAST2Q6P0Q8 1798 aa15.82■□□□□ 0.12
VRK3-205ENST00000593919 BRCA1P38398 1863 aaKnown RBP15.82■□□□□ 0.12
VRK3-205ENST00000593919 RASEFQ8IZ41 740 aa15.82■□□□□ 0.12
VRK3-205ENST00000593919 IL17RAQ96F46 866 aa15.82■□□□□ 0.12
VRK3-205ENST00000593919 CD209Q9NNX6 404 aa15.82■□□□□ 0.12
VRK3-205ENST00000593919 ZNF219Q9P2Y4 722 aaPredicted RBP15.82■□□□□ 0.12
VRK3-205ENST00000593919 JAG2Q9Y219 1238 aa15.82■□□□□ 0.12
VRK3-205ENST00000593919 SRCAPQ6ZRS2 3230 aa15.81■□□□□ 0.12
VRK3-205ENST00000593919 A0A0G2JLW4 131 aa15.81■□□□□ 0.12
VRK3-205ENST00000593919 GPAA1O43292 621 aa15.81■□□□□ 0.12
VRK3-205ENST00000593919 C7orf43Q8WVR3 580 aa15.81■□□□□ 0.12
VRK3-205ENST00000593919 SNX14Q9Y5W7 946 aa15.81■□□□□ 0.12
VRK3-205ENST00000593919 HSPD1P10809 573 aaKnown RBP15.8■□□□□ 0.12
VRK3-205ENST00000593919 IL1R1P14778 569 aa15.8■□□□□ 0.12
VRK3-205ENST00000593919 DPEP1P16444 411 aa15.8■□□□□ 0.12
VRK3-205ENST00000593919 CREB3L3Q68CJ9 461 aa15.8■□□□□ 0.12
VRK3-205ENST00000593919 DSCC1Q9BVC3 393 aa15.8■□□□□ 0.12
VRK3-205ENST00000593919 RAI14Q9P0K7 980 aa15.8■□□□□ 0.12
VRK3-205ENST00000593919 SNED1Q8TER0 1413 aa15.8■□□□□ 0.12
VRK3-205ENST00000593919 K7ELQ4 463 aaPredicted RBP15.8■□□□□ 0.12
VRK3-205ENST00000593919 RIMBP2O15034 1052 aa15.8■□□□□ 0.12
VRK3-205ENST00000593919 KCNA3P22001 575 aa15.8■□□□□ 0.12
VRK3-205ENST00000593919 TTLL6Q8N841 843 aa15.8■□□□□ 0.12
VRK3-205ENST00000593919 SGIP1Q9BQI5 828 aa15.8■□□□□ 0.12
VRK3-205ENST00000593919 SLC27A2O14975 620 aa15.79■□□□□ 0.12
VRK3-205ENST00000593919 FOXP2O15409 715 aa15.79■□□□□ 0.12
VRK3-205ENST00000593919 HSP90AA1P07900 732 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms