RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 F8W031 263 aaPredicted RBP18.7■□□□□ 0.58
PNKP-202ENST00000593706 MYO1BO43795 1136 aa18.7■□□□□ 0.58
PNKP-202ENST00000593706 VAMP4O75379 141 aa18.7■□□□□ 0.58
PNKP-202ENST00000593706 TM4SF4P48230 202 aa18.7■□□□□ 0.58
PNKP-202ENST00000593706 WDR63Q8IWG1 891 aa18.7■□□□□ 0.58
PNKP-202ENST00000593706 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.7■□□□□ 0.58
PNKP-202ENST00000593706 SSC5DA1L4H1 1573 aa18.69■□□□□ 0.58
PNKP-202ENST00000593706 FOXO4P98177 505 aa18.69■□□□□ 0.58
PNKP-202ENST00000593706 PKN2Q16513 984 aaKnown RBP18.69■□□□□ 0.58
PNKP-202ENST00000593706 CCDC57Q2TAC2 916 aa18.69■□□□□ 0.58
PNKP-202ENST00000593706 FAM9BQ8IZU0 186 aa18.69■□□□□ 0.58
PNKP-202ENST00000593706 ZBED3Q96IU2 234 aaPredicted RBP18.69■□□□□ 0.58
PNKP-202ENST00000593706 DEFB129Q9H1M3 183 aa18.69■□□□□ 0.58
PNKP-202ENST00000593706 HPS5Q9UPZ3 1129 aa18.69■□□□□ 0.58
PNKP-202ENST00000593706 ZNF521Q96K83 1311 aa18.69■□□□□ 0.58
PNKP-202ENST00000593706 IRS2Q9Y4H2 1338 aa18.69■□□□□ 0.58
PNKP-202ENST00000593706 LMBR1LQ6UX01 489 aa18.68■□□□□ 0.58
PNKP-202ENST00000593706 C15orf52Q6ZUT6 534 aaKnown RBP18.68■□□□□ 0.58
PNKP-202ENST00000593706 CERS5Q8N5B7 392 aa18.68■□□□□ 0.58
PNKP-202ENST00000593706 SPINK5Q9NQ38 1064 aaPredicted RBP18.68■□□□□ 0.58
PNKP-202ENST00000593706 CNNM1Q9NRU3 951 aa18.68■□□□□ 0.58
PNKP-202ENST00000593706 FZD1Q9UP38 647 aa18.68■□□□□ 0.58
PNKP-202ENST00000593706 BRCA2P51587 3418 aa18.67■□□□□ 0.58
PNKP-202ENST00000593706 CLRN2A0PK11 232 aa18.67■□□□□ 0.58
PNKP-202ENST00000593706 GPR25O00155 361 aa18.67■□□□□ 0.58
PNKP-202ENST00000593706 GRM8O00222 908 aa18.67■□□□□ 0.58
PNKP-202ENST00000593706 PLIN1O60240 522 aa18.67■□□□□ 0.58
PNKP-202ENST00000593706 BEND3Q5T5X7 828 aa18.67■□□□□ 0.58
PNKP-202ENST00000593706 SPRYD7Q5W111 196 aa18.67■□□□□ 0.58
PNKP-202ENST00000593706 MTMR14Q8NCE2 650 aa18.67■□□□□ 0.58
PNKP-202ENST00000593706 VEZTQ9HBM0 779 aa18.67■□□□□ 0.58
PNKP-202ENST00000593706 JAG2Q9Y219 1238 aa18.67■□□□□ 0.58
PNKP-202ENST00000593706 PPP2R3BQ9Y5P8 575 aa18.67■□□□□ 0.58
PNKP-202ENST00000593706 RBBP6Q7Z6E9 1792 aaKnown RBP18.66■□□□□ 0.58
PNKP-202ENST00000593706 PPP1R12BO60237 982 aaPredicted RBP18.66■□□□□ 0.58
PNKP-202ENST00000593706 IL1R1P14778 569 aa18.66■□□□□ 0.58
PNKP-202ENST00000593706 RBM5P52756 815 aaKnown RBP eCLIP18.66■□□□□ 0.58
PNKP-202ENST00000593706 CFAP100Q494V2 611 aa18.66■□□□□ 0.58
PNKP-202ENST00000593706 LDLRAD1Q5T700 205 aa18.66■□□□□ 0.58
PNKP-202ENST00000593706 LDHAL6AQ6ZMR3 332 aa18.66■□□□□ 0.58
PNKP-202ENST00000593706 ZNF594Q96JF6 807 aaPredicted RBP18.66■□□□□ 0.58
PNKP-202ENST00000593706 C9orf78Q9NZ63 289 aaPredicted RBP18.66■□□□□ 0.58
PNKP-202ENST00000593706 MKI67P46013 3256 aaKnown RBP18.66■□□□□ 0.58
PNKP-202ENST00000593706 AK9Q5TCS8 1911 aa18.65■□□□□ 0.58
PNKP-202ENST00000593706 SPDYE2BA6NHP3 402 aa18.65■□□□□ 0.58
PNKP-202ENST00000593706 FKTNO75072 461 aa18.65■□□□□ 0.58
PNKP-202ENST00000593706 SPDYE6P0CI01 402 aa18.65■□□□□ 0.58
PNKP-202ENST00000593706 NOM1Q5C9Z4 860 aaKnown RBP18.65■□□□□ 0.58
PNKP-202ENST00000593706 SLC4A10Q6U841 1118 aa18.65■□□□□ 0.58
PNKP-202ENST00000593706 SLC10A4Q96EP9 437 aa18.65■□□□□ 0.58
PNKP-202ENST00000593706 PCDHAC2Q9Y5I4 1007 aa18.65■□□□□ 0.58
PNKP-202ENST00000593706 MANSC4A6NHS7 340 aaPredicted RBP18.64■□□□□ 0.57
PNKP-202ENST00000593706 ALDH1A1P00352 501 aa18.64■□□□□ 0.57
PNKP-202ENST00000593706 FKBP1AP62942 108 aaKnown RBP18.64■□□□□ 0.57
PNKP-202ENST00000593706 SUPT20HL1Q3ZLR7 823 aa18.64■□□□□ 0.57
PNKP-202ENST00000593706 EPHA10Q5JZY3 1008 aa18.64■□□□□ 0.57
PNKP-202ENST00000593706 ZBTB48P10074 688 aaPredicted RBP18.63■□□□□ 0.57
PNKP-202ENST00000593706 FBXO46Q6PJ61 603 aaPredicted RBP18.63■□□□□ 0.57
PNKP-202ENST00000593706 CLMNQ96JQ2 1002 aa18.63■□□□□ 0.57
PNKP-202ENST00000593706 CFHR5Q9BXR6 569 aa18.63■□□□□ 0.57
PNKP-202ENST00000593706 MAP3K11Q16584 847 aa18.62■□□□□ 0.57
PNKP-202ENST00000593706 WNK4Q96J92 1243 aa18.62■□□□□ 0.57
PNKP-202ENST00000593706 PRMT6Q96LA8 375 aaPredicted RBP18.62■□□□□ 0.57
PNKP-202ENST00000593706 KIAA0100Q14667 2235 aaKnown RBP18.61■□□□□ 0.57
PNKP-202ENST00000593706 ALDH1L1O75891 902 aa18.61■□□□□ 0.57
PNKP-202ENST00000593706 IREB2P48200 963 aaKnown RBP18.61■□□□□ 0.57
PNKP-202ENST00000593706 INHBEP58166 350 aa18.61■□□□□ 0.57
PNKP-202ENST00000593706 MFSD14BQ5SR56 506 aa18.61■□□□□ 0.57
PNKP-202ENST00000593706 IFNL1Q8IU54 200 aa18.61■□□□□ 0.57
PNKP-202ENST00000593706 SRCIN1Q9C0H9 1055 aa18.61■□□□□ 0.57
PNKP-202ENST00000593706 R3HDMLQ9H3Y0 253 aa18.61■□□□□ 0.57
PNKP-202ENST00000593706 AOX1Q06278 1338 aa18.6■□□□□ 0.57
PNKP-202ENST00000593706 TNFAIP1Q13829 316 aa18.6■□□□□ 0.57
PNKP-202ENST00000593706 RASA3Q14644 834 aa18.6■□□□□ 0.57
PNKP-202ENST00000593706 NBPF12Q5TAG4 269 aaPredicted RBP18.6■□□□□ 0.57
PNKP-202ENST00000593706 TTF2Q9UNY4 1162 aaKnown RBP18.6■□□□□ 0.57
PNKP-202ENST00000593706 FAM205AQ6ZU69 1335 aa18.59■□□□□ 0.57
PNKP-202ENST00000593706 UNCXA6NJT0 531 aa18.59■□□□□ 0.57
PNKP-202ENST00000593706 CCER2I3L3R5 266 aa18.59■□□□□ 0.57
PNKP-202ENST00000593706 HIBADHP31937 336 aaKnown RBP18.59■□□□□ 0.57
PNKP-202ENST00000593706 GYG1P46976 350 aa18.59■□□□□ 0.57
PNKP-202ENST00000593706 UBE4AQ14139 1066 aa18.59■□□□□ 0.57
PNKP-202ENST00000593706 IGF2BP3O00425 579 aaKnown RBP eCLIP18.58■□□□□ 0.56
PNKP-202ENST00000593706 PRPF38BQ5VTL8 546 aaKnown RBP18.58■□□□□ 0.56
PNKP-202ENST00000593706 ANKRD13AQ8IZ07 590 aa18.58■□□□□ 0.56
PNKP-202ENST00000593706 SERPINA10Q9UK55 444 aa18.58■□□□□ 0.56
PNKP-202ENST00000593706 TRIM17Q9Y577 477 aa18.58■□□□□ 0.56
PNKP-202ENST00000593706 SPDYE2Q495Y8 402 aa18.57■□□□□ 0.56
PNKP-202ENST00000593706 OTUD7BQ6GQQ9 843 aa18.57■□□□□ 0.56
PNKP-202ENST00000593706 VPS37DQ86XT2 251 aa18.57■□□□□ 0.56
PNKP-202ENST00000593706 TDRD7Q8NHU6 1098 aaKnown RBP18.57■□□□□ 0.56
PNKP-202ENST00000593706 SUCLG2Q96I99 432 aa18.57■□□□□ 0.56
PNKP-202ENST00000593706 PUS3Q9BZE2 481 aaKnown RBP18.57■□□□□ 0.56
PNKP-202ENST00000593706 MROH5Q6ZUA9 1318 aa18.56■□□□□ 0.56
PNKP-202ENST00000593706 TDRD3Q9H7E2 651 aaKnown RBP18.56■□□□□ 0.56
PNKP-202ENST00000593706 ZNF70Q9UC06 446 aaPredicted RBP18.56■□□□□ 0.56
PNKP-202ENST00000593706 FRAT2O75474 233 aaPredicted RBP18.55■□□□□ 0.56
PNKP-202ENST00000593706 USP2O75604 605 aaPredicted RBP18.55■□□□□ 0.56
PNKP-202ENST00000593706 NBPF7P0C2Y1 421 aaPredicted RBP18.55■□□□□ 0.56
PNKP-202ENST00000593706 TNNI2P48788 182 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms