RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 BEND3Q5T5X7 828 aa22.23■■□□□ 1.15
RETREG3-212ENST00000593251 LMBR1LQ6UX01 489 aa22.23■■□□□ 1.15
RETREG3-212ENST00000593251 DEFB129Q9H1M3 183 aa22.23■■□□□ 1.15
RETREG3-212ENST00000593251 SSC5DA1L4H1 1573 aa22.22■■□□□ 1.15
RETREG3-212ENST00000593251 GPR25O00155 361 aa22.22■■□□□ 1.15
RETREG3-212ENST00000593251 PLIN1O60240 522 aa22.22■■□□□ 1.15
RETREG3-212ENST00000593251 SREBF2Q12772 1141 aa22.22■■□□□ 1.15
RETREG3-212ENST00000593251 NCBP3Q53F19 620 aaKnown RBP22.22■■□□□ 1.15
RETREG3-212ENST00000593251 LDLRAD1Q5T700 205 aa22.22■■□□□ 1.15
RETREG3-212ENST00000593251 C15orf52Q6ZUT6 534 aaKnown RBP22.22■■□□□ 1.15
RETREG3-212ENST00000593251 WDR63Q8IWG1 891 aa22.22■■□□□ 1.15
RETREG3-212ENST00000593251 R3HDMLQ9H3Y0 253 aa22.22■■□□□ 1.15
RETREG3-212ENST00000593251 SPINK5Q9NQ38 1064 aaPredicted RBP22.22■■□□□ 1.15
RETREG3-212ENST00000593251 COL1A1P02452 1464 aaPredicted RBP22.22■■□□□ 1.15
RETREG3-212ENST00000593251 LAMB1P07942 1786 aa22.21■■□□□ 1.15
RETREG3-212ENST00000593251 CLRN2A0PK11 232 aa22.21■■□□□ 1.15
RETREG3-212ENST00000593251 SPRYD7Q5W111 196 aa22.21■■□□□ 1.15
RETREG3-212ENST00000593251 ZNF804AQ7Z570 1209 aa22.21■■□□□ 1.15
RETREG3-212ENST00000593251 AOX1Q06278 1338 aa22.21■■□□□ 1.15
RETREG3-212ENST00000593251 IL1R1P14778 569 aa22.2■■□□□ 1.14
RETREG3-212ENST00000593251 CFAP100Q494V2 611 aa22.2■■□□□ 1.14
RETREG3-212ENST00000593251 PKN2Q16513 984 aaKnown RBP22.19■■□□□ 1.14
RETREG3-212ENST00000593251 TAF7LQ5H9L4 462 aa22.19■■□□□ 1.14
RETREG3-212ENST00000593251 MTMR14Q8NCE2 650 aa22.19■■□□□ 1.14
RETREG3-212ENST00000593251 CLMNQ96JQ2 1002 aa22.19■■□□□ 1.14
RETREG3-212ENST00000593251 PRMT6Q96LA8 375 aaPredicted RBP22.19■■□□□ 1.14
RETREG3-212ENST00000593251 OTOFQ9HC10 1997 aa22.19■■□□□ 1.14
RETREG3-212ENST00000593251 CCDC57Q2TAC2 916 aa22.18■■□□□ 1.14
RETREG3-212ENST00000593251 LDHAL6AQ6ZMR3 332 aa22.18■■□□□ 1.14
RETREG3-212ENST00000593251 SLC10A4Q96EP9 437 aa22.18■■□□□ 1.14
RETREG3-212ENST00000593251 VEZTQ9HBM0 779 aa22.18■■□□□ 1.14
RETREG3-212ENST00000593251 ARAP2Q8WZ64 1704 aa22.17■■□□□ 1.14
RETREG3-212ENST00000593251 SPDYE2BA6NHP3 402 aa22.17■■□□□ 1.14
RETREG3-212ENST00000593251 GRM8O00222 908 aa22.17■■□□□ 1.14
RETREG3-212ENST00000593251 FKTNO75072 461 aa22.17■■□□□ 1.14
RETREG3-212ENST00000593251 SPDYE6P0CI01 402 aa22.17■■□□□ 1.14
RETREG3-212ENST00000593251 CNNM1Q9NRU3 951 aa22.17■■□□□ 1.14
RETREG3-212ENST00000593251 MYO1BO43795 1136 aa22.16■■□□□ 1.14
RETREG3-212ENST00000593251 RBM5P52756 815 aaKnown RBP eCLIP22.16■■□□□ 1.14
RETREG3-212ENST00000593251 MAP3K11Q16584 847 aa22.16■■□□□ 1.14
RETREG3-212ENST00000593251 NOM1Q5C9Z4 860 aaKnown RBP22.16■■□□□ 1.14
RETREG3-212ENST00000593251 SLC4A10Q6U841 1118 aa22.16■■□□□ 1.14
RETREG3-212ENST00000593251 C9orf78Q9NZ63 289 aaPredicted RBP22.16■■□□□ 1.14
RETREG3-212ENST00000593251 PPP1R12BO60237 982 aaPredicted RBP22.15■■□□□ 1.14
RETREG3-212ENST00000593251 FKBP1AP62942 108 aaKnown RBP22.15■■□□□ 1.14
RETREG3-212ENST00000593251 NBPF12Q5TAG4 269 aaPredicted RBP22.15■■□□□ 1.14
RETREG3-212ENST00000593251 WNK4Q96J92 1243 aa22.15■■□□□ 1.14
RETREG3-212ENST00000593251 CFHR5Q9BXR6 569 aa22.15■■□□□ 1.14
RETREG3-212ENST00000593251 PPP2R3BQ9Y5P8 575 aa22.15■■□□□ 1.14
RETREG3-212ENST00000593251 MANSC4A6NHS7 340 aaPredicted RBP22.14■■□□□ 1.13
RETREG3-212ENST00000593251 FBXO46Q6PJ61 603 aaPredicted RBP22.14■■□□□ 1.13
RETREG3-212ENST00000593251 IFNL1Q8IU54 200 aa22.14■■□□□ 1.13
RETREG3-212ENST00000593251 ANP32CO43423 234 aa22.13■■□□□ 1.13
RETREG3-212ENST00000593251 GYG1P46976 350 aa22.13■■□□□ 1.13
RETREG3-212ENST00000593251 PUS3Q9BZE2 481 aaKnown RBP22.13■■□□□ 1.13
RETREG3-212ENST00000593251 IGF2BP3O00425 579 aaKnown RBP eCLIP22.12■■□□□ 1.13
RETREG3-212ENST00000593251 ALDH1A1P00352 501 aa22.12■■□□□ 1.13
RETREG3-212ENST00000593251 ZBTB48P10074 688 aaPredicted RBP22.12■■□□□ 1.13
RETREG3-212ENST00000593251 RASA3Q14644 834 aa22.12■■□□□ 1.13
RETREG3-212ENST00000593251 SUPT20HL1Q3ZLR7 823 aa22.12■■□□□ 1.13
RETREG3-212ENST00000593251 SUCLG2Q96I99 432 aa22.12■■□□□ 1.13
RETREG3-212ENST00000593251 SRCIN1Q9C0H9 1055 aa22.12■■□□□ 1.13
RETREG3-212ENST00000593251 FAM205AQ6ZU69 1335 aa22.11■■□□□ 1.13
RETREG3-212ENST00000593251 USP2O75604 605 aaPredicted RBP22.11■■□□□ 1.13
RETREG3-212ENST00000593251 ALDH1L1O75891 902 aa22.11■■□□□ 1.13
RETREG3-212ENST00000593251 GJA5P36382 358 aa22.11■■□□□ 1.13
RETREG3-212ENST00000593251 MFSD14BQ5SR56 506 aa22.11■■□□□ 1.13
RETREG3-212ENST00000593251 TDRD7Q8NHU6 1098 aaKnown RBP22.11■■□□□ 1.13
RETREG3-212ENST00000593251 KAZALD1Q96I82 304 aa22.11■■□□□ 1.13
RETREG3-212ENST00000593251 TTF2Q9UNY4 1162 aaKnown RBP22.11■■□□□ 1.13
RETREG3-212ENST00000593251 HIBADHP31937 336 aaKnown RBP22.1■■□□□ 1.13
RETREG3-212ENST00000593251 IREB2P48200 963 aaKnown RBP22.1■■□□□ 1.13
RETREG3-212ENST00000593251 INHBEP58166 350 aa22.1■■□□□ 1.13
RETREG3-212ENST00000593251 UBE4AQ14139 1066 aa22.1■■□□□ 1.13
RETREG3-212ENST00000593251 FAM9BQ8IZU0 186 aa22.1■■□□□ 1.13
RETREG3-212ENST00000593251 TDRD3Q9H7E2 651 aaKnown RBP22.1■■□□□ 1.13
RETREG3-212ENST00000593251 ZNF70Q9UC06 446 aaPredicted RBP22.1■■□□□ 1.13
RETREG3-212ENST00000593251 HTTP42858 3142 aa22.09■■□□□ 1.13
RETREG3-212ENST00000593251 NBPF7P0C2Y1 421 aaPredicted RBP22.09■■□□□ 1.13
RETREG3-212ENST00000593251 FAM84BQ96KN1 310 aaPredicted RBP22.09■■□□□ 1.13
RETREG3-212ENST00000593251 TRIM17Q9Y577 477 aa22.09■■□□□ 1.13
RETREG3-212ENST00000593251 SPDYE2Q495Y8 402 aa22.08■■□□□ 1.13
RETREG3-212ENST00000593251 CDAN1Q8IWY9 1227 aa22.08■■□□□ 1.13
RETREG3-212ENST00000593251 IQSEC3Q9UPP2 1182 aaPredicted RBP22.08■■□□□ 1.13
RETREG3-212ENST00000593251 GRIK5Q16478 980 aa22.07■■□□□ 1.12
RETREG3-212ENST00000593251 ANKRD13AQ8IZ07 590 aa22.07■■□□□ 1.12
RETREG3-212ENST00000593251 ELP3Q9H9T3 547 aa22.07■■□□□ 1.12
RETREG3-212ENST00000593251 UNCXA6NJT0 531 aa22.06■■□□□ 1.12
RETREG3-212ENST00000593251 TCP10L2B9ZVM9 353 aa22.06■■□□□ 1.12
RETREG3-212ENST00000593251 TNFAIP1Q13829 316 aa22.06■■□□□ 1.12
RETREG3-212ENST00000593251 PRPF38BQ5VTL8 546 aaKnown RBP22.06■■□□□ 1.12
RETREG3-212ENST00000593251 OTOP1Q7RTM1 612 aa22.06■■□□□ 1.12
RETREG3-212ENST00000593251 DZIP1LQ8IYY4 767 aaKnown RBP22.06■■□□□ 1.12
RETREG3-212ENST00000593251 SERPINA10Q9UK55 444 aa22.06■■□□□ 1.12
RETREG3-212ENST00000593251 RIPOR2Q9Y4F9 1068 aa22.06■■□□□ 1.12
RETREG3-212ENST00000593251 CENPFP49454 3210 aa22.05■■□□□ 1.12
RETREG3-212ENST00000593251 CRKP46108 304 aa22.05■■□□□ 1.12
RETREG3-212ENST00000593251 CRHR2Q13324 411 aa22.05■■□□□ 1.12
RETREG3-212ENST00000593251 TEPSINQ96N21 525 aa22.05■■□□□ 1.12
RETREG3-212ENST00000593251 PTPN18Q99952 460 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms