RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 DLGAP5Q15398 846 aa14.31□□□□□ -0.12
PRKCSH-220ENST00000593104 CFAP100Q494V2 611 aa14.31□□□□□ -0.12
PRKCSH-220ENST00000593104 CDAN1Q8IWY9 1227 aa14.31□□□□□ -0.12
PRKCSH-220ENST00000593104 PRMT6Q96LA8 375 aaPredicted RBP14.31□□□□□ -0.12
PRKCSH-220ENST00000593104 VEZTQ9HBM0 779 aa14.31□□□□□ -0.12
PRKCSH-220ENST00000593104 SPINK5Q9NQ38 1064 aaPredicted RBP14.31□□□□□ -0.12
PRKCSH-220ENST00000593104 FKTNO75072 461 aa14.3□□□□□ -0.12
PRKCSH-220ENST00000593104 VAMP4O75379 141 aa14.3□□□□□ -0.12
PRKCSH-220ENST00000593104 CAP1Q01518 475 aa14.3□□□□□ -0.12
PRKCSH-220ENST00000593104 EXOSC9Q06265 439 aaKnown RBP14.3□□□□□ -0.12
PRKCSH-220ENST00000593104 SREBF2Q12772 1141 aa14.3□□□□□ -0.12
PRKCSH-220ENST00000593104 NBPF12Q5TAG4 269 aaPredicted RBP14.3□□□□□ -0.12
PRKCSH-220ENST00000593104 LINS1Q8NG48 757 aa14.3□□□□□ -0.12
PRKCSH-220ENST00000593104 OTOFQ9HC10 1997 aa14.29□□□□□ -0.12
PRKCSH-220ENST00000593104 CCDC27Q2M243 656 aa14.29□□□□□ -0.12
PRKCSH-220ENST00000593104 BEND3Q5T5X7 828 aa14.29□□□□□ -0.12
PRKCSH-220ENST00000593104 FBXO46Q6PJ61 603 aaPredicted RBP14.29□□□□□ -0.12
PRKCSH-220ENST00000593104 LMBR1LQ6UX01 489 aa14.29□□□□□ -0.12
PRKCSH-220ENST00000593104 IFNL1Q8IU54 200 aa14.29□□□□□ -0.12
PRKCSH-220ENST00000593104 SLC10A4Q96EP9 437 aa14.29□□□□□ -0.12
PRKCSH-220ENST00000593104 WNK4Q96J92 1243 aa14.29□□□□□ -0.12
PRKCSH-220ENST00000593104 MYH16Q9H6N6 1097 aa14.29□□□□□ -0.12
PRKCSH-220ENST00000593104 RBM5P52756 815 aaKnown RBP eCLIP14.28□□□□□ -0.12
PRKCSH-220ENST00000593104 IFIT5Q13325 482 aaKnown RBP14.28□□□□□ -0.12
PRKCSH-220ENST00000593104 PKN2Q16513 984 aaKnown RBP14.28□□□□□ -0.12
PRKCSH-220ENST00000593104 TRIM17Q9Y577 477 aa14.28□□□□□ -0.12
PRKCSH-220ENST00000593104 POTEFA5A3E0 1075 aa14.27□□□□□ -0.13
PRKCSH-220ENST00000593104 SPDYE2BA6NHP3 402 aa14.27□□□□□ -0.13
PRKCSH-220ENST00000593104 USP2O75604 605 aaPredicted RBP14.27□□□□□ -0.13
PRKCSH-220ENST00000593104 SPDYE6P0CI01 402 aa14.27□□□□□ -0.13
PRKCSH-220ENST00000593104 IL1R1P14778 569 aa14.27□□□□□ -0.13
PRKCSH-220ENST00000593104 GYG1P46976 350 aa14.27□□□□□ -0.13
PRKCSH-220ENST00000593104 GRIK5Q16478 980 aa14.27□□□□□ -0.13
PRKCSH-220ENST00000593104 PRPF38BQ5VTL8 546 aaKnown RBP14.27□□□□□ -0.13
PRKCSH-220ENST00000593104 CD99L2Q8TCZ2 262 aa14.27□□□□□ -0.13
PRKCSH-220ENST00000593104 CNKSR2Q8WXI2 1034 aa14.27□□□□□ -0.13
PRKCSH-220ENST00000593104 CHMP4AQ9BY43 222 aa14.27□□□□□ -0.13
PRKCSH-220ENST00000593104 PUS3Q9BZE2 481 aaKnown RBP14.27□□□□□ -0.13
PRKCSH-220ENST00000593104 COL1A1P02452 1464 aaPredicted RBP14.26□□□□□ -0.13
PRKCSH-220ENST00000593104 CACNA1FO60840 1977 aa14.26□□□□□ -0.13
PRKCSH-220ENST00000593104 RASA3Q14644 834 aa14.26□□□□□ -0.13
PRKCSH-220ENST00000593104 MAP3K11Q16584 847 aa14.26□□□□□ -0.13
PRKCSH-220ENST00000593104 C15orf52Q6ZUT6 534 aaKnown RBP14.26□□□□□ -0.13
PRKCSH-220ENST00000593104 OTOP1Q7RTM1 612 aa14.26□□□□□ -0.13
PRKCSH-220ENST00000593104 ZNF804AQ7Z570 1209 aa14.26□□□□□ -0.13
PRKCSH-220ENST00000593104 PTPN18Q99952 460 aa14.26□□□□□ -0.13
PRKCSH-220ENST00000593104 TDRD3Q9H7E2 651 aaKnown RBP14.26□□□□□ -0.13
PRKCSH-220ENST00000593104 ELP3Q9H9T3 547 aa14.26□□□□□ -0.13
PRKCSH-220ENST00000593104 IQSEC3Q9UPP2 1182 aaPredicted RBP14.26□□□□□ -0.13
PRKCSH-220ENST00000593104 IL16Q14005 1332 aa14.25□□□□□ -0.13
PRKCSH-220ENST00000593104 MANSC4A6NHS7 340 aaPredicted RBP14.25□□□□□ -0.13
PRKCSH-220ENST00000593104 CRHR2Q13324 411 aa14.25□□□□□ -0.13
PRKCSH-220ENST00000593104 TAF7LQ5H9L4 462 aa14.25□□□□□ -0.13
PRKCSH-220ENST00000593104 MTMR14Q8NCE2 650 aa14.25□□□□□ -0.13
PRKCSH-220ENST00000593104 SUCLG2Q96I99 432 aa14.25□□□□□ -0.13
PRKCSH-220ENST00000593104 CFHR5Q9BXR6 569 aa14.25□□□□□ -0.13
PRKCSH-220ENST00000593104 MRS2Q9HD23 443 aa14.25□□□□□ -0.13
PRKCSH-220ENST00000593104 CNNM1Q9NRU3 951 aa14.25□□□□□ -0.13
PRKCSH-220ENST00000593104 ZSWIM8A7E2V4 1837 aa14.25□□□□□ -0.13
PRKCSH-220ENST00000593104 LAMB1P07942 1786 aa14.24□□□□□ -0.13
PRKCSH-220ENST00000593104 TCP10L2B9ZVM9 353 aa14.24□□□□□ -0.13
PRKCSH-220ENST00000593104 PPP1R12BO60237 982 aaPredicted RBP14.24□□□□□ -0.13
PRKCSH-220ENST00000593104 NOM1Q5C9Z4 860 aaKnown RBP14.24□□□□□ -0.13
PRKCSH-220ENST00000593104 SLC4A10Q6U841 1118 aa14.24□□□□□ -0.13
PRKCSH-220ENST00000593104 LDHAL6AQ6ZMR3 332 aa14.24□□□□□ -0.13
PRKCSH-220ENST00000593104 ZNF70Q9UC06 446 aaPredicted RBP14.24□□□□□ -0.13
PRKCSH-220ENST00000593104 TTF2Q9UNY4 1162 aaKnown RBP14.24□□□□□ -0.13
PRKCSH-220ENST00000593104 GRM8O00222 908 aa14.23□□□□□ -0.13
PRKCSH-220ENST00000593104 MYO1BO43795 1136 aa14.23□□□□□ -0.13
PRKCSH-220ENST00000593104 ECM2O94769 699 aaPredicted RBP14.23□□□□□ -0.13
PRKCSH-220ENST00000593104 ZBTB48P10074 688 aaPredicted RBP14.23□□□□□ -0.13
PRKCSH-220ENST00000593104 CACNB3P54284 484 aa14.23□□□□□ -0.13
PRKCSH-220ENST00000593104 CCDC57Q2TAC2 916 aa14.23□□□□□ -0.13
PRKCSH-220ENST00000593104 MFSD14BQ5SR56 506 aa14.23□□□□□ -0.13
PRKCSH-220ENST00000593104 KAZALD1Q96I82 304 aa14.23□□□□□ -0.13
PRKCSH-220ENST00000593104 TMEM39BQ9GZU3 492 aa14.23□□□□□ -0.13
PRKCSH-220ENST00000593104 ARAP2Q8WZ64 1704 aa14.22□□□□□ -0.13
PRKCSH-220ENST00000593104 ALDH1A1P00352 501 aa14.22□□□□□ -0.13
PRKCSH-220ENST00000593104 SPDYE2Q495Y8 402 aa14.22□□□□□ -0.13
PRKCSH-220ENST00000593104 TDRD7Q8NHU6 1098 aaKnown RBP14.22□□□□□ -0.13
PRKCSH-220ENST00000593104 OPTNQ96CV9 577 aa14.22□□□□□ -0.13
PRKCSH-220ENST00000593104 FAM84BQ96KN1 310 aaPredicted RBP14.22□□□□□ -0.13
PRKCSH-220ENST00000593104 TEPSINQ96N21 525 aa14.22□□□□□ -0.13
PRKCSH-220ENST00000593104 PPP2R3BQ9Y5P8 575 aa14.22□□□□□ -0.13
PRKCSH-220ENST00000593104 MYCP01106 439 aaPredicted RBP14.21□□□□□ -0.13
PRKCSH-220ENST00000593104 NBPF7P0C2Y1 421 aaPredicted RBP14.21□□□□□ -0.13
PRKCSH-220ENST00000593104 IREB2P48200 963 aaKnown RBP14.21□□□□□ -0.13
PRKCSH-220ENST00000593104 MMP14P50281 582 aa14.21□□□□□ -0.13
PRKCSH-220ENST00000593104 FKBP1AP62942 108 aaKnown RBP14.21□□□□□ -0.13
PRKCSH-220ENST00000593104 CHAF1AQ13111 956 aaPredicted RBP14.21□□□□□ -0.13
PRKCSH-220ENST00000593104 SUPT20HL1Q3ZLR7 823 aa14.21□□□□□ -0.13
PRKCSH-220ENST00000593104 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.21□□□□□ -0.13
PRKCSH-220ENST00000593104 C9orf78Q9NZ63 289 aaPredicted RBP14.21□□□□□ -0.13
PRKCSH-220ENST00000593104 PTPN22Q9Y2R2 807 aa14.21□□□□□ -0.13
PRKCSH-220ENST00000593104 FAM205AQ6ZU69 1335 aa14.2□□□□□ -0.14
PRKCSH-220ENST00000593104 EN2P19622 333 aaPredicted RBP14.2□□□□□ -0.14
PRKCSH-220ENST00000593104 HIBADHP31937 336 aaKnown RBP14.2□□□□□ -0.14
PRKCSH-220ENST00000593104 LRRC24Q50LG9 513 aa14.2□□□□□ -0.14
PRKCSH-220ENST00000593104 WDR63Q8IWG1 891 aa14.2□□□□□ -0.14
PRKCSH-220ENST00000593104 DZIP1LQ8IYY4 767 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms