RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 IGHDP01880 384 aa12.23□□□□□ -0.45
TPM4-216ENST00000592822 VEGFAP15692 232 aaPredicted RBP12.23□□□□□ -0.45
TPM4-216ENST00000592822 RPS12P25398 132 aaKnown RBP12.23□□□□□ -0.45
TPM4-216ENST00000592822 EPS15P42566 896 aa12.23□□□□□ -0.45
TPM4-216ENST00000592822 AACSQ86V21 672 aa12.23□□□□□ -0.45
TPM4-216ENST00000592822 CERS5Q8N5B7 392 aa12.23□□□□□ -0.45
TPM4-216ENST00000592822 DPF2Q92785 391 aa12.23□□□□□ -0.45
TPM4-216ENST00000592822 LRRCC1Q9C099 1032 aa12.23□□□□□ -0.45
TPM4-216ENST00000592822 GNL3LQ9NVN8 582 aaKnown RBP12.23□□□□□ -0.45
TPM4-216ENST00000592822 HACL1Q9UJ83 578 aa12.23□□□□□ -0.45
TPM4-216ENST00000592822 IQCA1LA6NCM1 817 aa12.22□□□□□ -0.45
TPM4-216ENST00000592822 KIF3CO14782 793 aa12.22□□□□□ -0.45
TPM4-216ENST00000592822 SEMA3EO15041 775 aa12.22□□□□□ -0.45
TPM4-216ENST00000592822 ZBTB22O15209 634 aa12.22□□□□□ -0.45
TPM4-216ENST00000592822 FRAT2O75474 233 aaPredicted RBP12.22□□□□□ -0.45
TPM4-216ENST00000592822 CHAF1AQ13111 956 aaPredicted RBP12.22□□□□□ -0.45
TPM4-216ENST00000592822 GORABQ5T7V8 394 aa12.22□□□□□ -0.45
TPM4-216ENST00000592822 CLASRPQ8N2M8 674 aaKnown RBP12.22□□□□□ -0.45
TPM4-216ENST00000592822 AGBL3Q8NEM8 1001 aa12.22□□□□□ -0.45
TPM4-216ENST00000592822 RWDD1Q9H446 243 aaPredicted RBP12.22□□□□□ -0.45
TPM4-216ENST00000592822 TAF1DQ9H5J8 278 aaPredicted RBP12.22□□□□□ -0.45
TPM4-216ENST00000592822 CNOT7Q9UIV1 285 aaKnown RBP12.22□□□□□ -0.45
TPM4-216ENST00000592822 AKAP11Q9UKA4 1901 aa12.21□□□□□ -0.45
TPM4-216ENST00000592822 MYO3BQ8WXR4 1341 aa12.21□□□□□ -0.45
TPM4-216ENST00000592822 ARID4AP29374 1257 aaPredicted RBP12.21□□□□□ -0.45
TPM4-216ENST00000592822 LMOD1P29536 600 aaPredicted RBP12.21□□□□□ -0.45
TPM4-216ENST00000592822 EPHX2P34913 555 aa12.21□□□□□ -0.45
TPM4-216ENST00000592822 FKBP1AP62942 108 aaKnown RBP12.21□□□□□ -0.45
TPM4-216ENST00000592822 RASGRF1Q13972 1273 aa12.21□□□□□ -0.45
TPM4-216ENST00000592822 SCARF1Q14162 830 aa12.21□□□□□ -0.45
TPM4-216ENST00000592822 MICALL2Q8IY33 904 aa12.21□□□□□ -0.45
TPM4-216ENST00000592822 GCC1Q96CN9 775 aa12.21□□□□□ -0.45
TPM4-216ENST00000592822 BCL11AQ9H165 835 aa12.21□□□□□ -0.45
TPM4-216ENST00000592822 USP17L8P0C7I0 530 aa12.2□□□□□ -0.46
TPM4-216ENST00000592822 UQCRFS1P1P0C7P4 283 aa12.2□□□□□ -0.46
TPM4-216ENST00000592822 ZNF280AP59817 542 aaPredicted RBP12.2□□□□□ -0.46
TPM4-216ENST00000592822 GRIK5Q16478 980 aa12.2□□□□□ -0.46
TPM4-216ENST00000592822 CCDC158Q5M9N0 1113 aa12.2□□□□□ -0.46
TPM4-216ENST00000592822 MFSD14BQ5SR56 506 aa12.2□□□□□ -0.46
TPM4-216ENST00000592822 TTC39AQ5SRH9 613 aa12.2□□□□□ -0.46
TPM4-216ENST00000592822 KIAA0825Q8IV33 1275 aa12.2□□□□□ -0.46
TPM4-216ENST00000592822 SMC5Q8IY18 1101 aa12.2□□□□□ -0.46
TPM4-216ENST00000592822 ZNF512BQ96KM6 892 aaPredicted RBP12.2□□□□□ -0.46
TPM4-216ENST00000592822 HMG20BQ9P0W2 317 aa12.2□□□□□ -0.46
TPM4-216ENST00000592822 DENND2AQ9ULE3 1009 aa12.2□□□□□ -0.46
TPM4-216ENST00000592822 PDS5AQ29RF7 1337 aaKnown RBP12.19□□□□□ -0.46
TPM4-216ENST00000592822 H7C1D1 291 aa12.19□□□□□ -0.46
TPM4-216ENST00000592822 EGFRP00533 1210 aa12.19□□□□□ -0.46
TPM4-216ENST00000592822 IFIT2P09913 472 aaKnown RBP12.19□□□□□ -0.46
TPM4-216ENST00000592822 MCAMP43121 646 aa12.19□□□□□ -0.46
TPM4-216ENST00000592822 PI16Q6UXB8 463 aa12.19□□□□□ -0.46
TPM4-216ENST00000592822 SAMD7Q7Z3H4 446 aa12.19□□□□□ -0.46
TPM4-216ENST00000592822 SPATA5Q8NB90 893 aa12.19□□□□□ -0.46
TPM4-216ENST00000592822 WDR66Q8TBY9 1149 aa12.19□□□□□ -0.46
TPM4-216ENST00000592822 TRPM4Q8TD43 1214 aa12.19□□□□□ -0.46
TPM4-216ENST00000592822 TBC1D22AQ8WUA7 517 aa12.19□□□□□ -0.46
TPM4-216ENST00000592822 ADARB2Q9NS39 739 aaKnown RBP12.19□□□□□ -0.46
TPM4-216ENST00000592822 ADAMTSL1Q8N6G6 1762 aa12.19□□□□□ -0.46
TPM4-216ENST00000592822 SALL1Q9NSC2 1324 aa12.18□□□□□ -0.46
TPM4-216ENST00000592822 F8W031 263 aaPredicted RBP12.18□□□□□ -0.46
TPM4-216ENST00000592822 POTEIP0CG38 1075 aa12.18□□□□□ -0.46
TPM4-216ENST00000592822 POTEJP0CG39 1038 aa12.18□□□□□ -0.46
TPM4-216ENST00000592822 HIRAP54198 1017 aaPredicted RBP12.18□□□□□ -0.46
TPM4-216ENST00000592822 TBC1D10BQ4KMP7 808 aaPredicted RBP12.18□□□□□ -0.46
TPM4-216ENST00000592822 ANKRD45Q5TZF3 282 aa12.18□□□□□ -0.46
TPM4-216ENST00000592822 C16orf71Q8IYS4 520 aaPredicted RBP12.18□□□□□ -0.46
TPM4-216ENST00000592822 SNRKQ9NRH2 765 aa12.18□□□□□ -0.46
TPM4-216ENST00000592822 NEFLP07196 543 aa12.17□□□□□ -0.46
TPM4-216ENST00000592822 EAPPQ56P03 285 aaPredicted RBP12.17□□□□□ -0.46
TPM4-216ENST00000592822 RBM26Q5T8P6 1007 aaKnown RBP12.17□□□□□ -0.46
TPM4-216ENST00000592822 B4GALNT3Q6L9W6 998 aa12.17□□□□□ -0.46
TPM4-216ENST00000592822 USP50Q70EL3 339 aaPredicted RBP12.17□□□□□ -0.46
TPM4-216ENST00000592822 PNMA8AQ86V59 439 aaPredicted RBP12.17□□□□□ -0.46
TPM4-216ENST00000592822 OGFOD1Q8N543 542 aa12.17□□□□□ -0.46
TPM4-216ENST00000592822 OTUD7AQ8TE49 926 aaPredicted RBP12.17□□□□□ -0.46
TPM4-216ENST00000592822 MYOZ2Q9NPC6 264 aa12.17□□□□□ -0.46
TPM4-216ENST00000592822 TTF2Q9UNY4 1162 aaKnown RBP12.17□□□□□ -0.46
TPM4-216ENST00000592822 MYO5AQ9Y4I1 1855 aaKnown RBP12.17□□□□□ -0.46
TPM4-216ENST00000592822 PRDX5P30044 214 aa12.16□□□□□ -0.46
TPM4-216ENST00000592822 ZAP70P43403 619 aa12.16□□□□□ -0.46
TPM4-216ENST00000592822 MMP14P50281 582 aa12.16□□□□□ -0.46
TPM4-216ENST00000592822 KIF4BQ2VIQ3 1234 aa12.16□□□□□ -0.46
TPM4-216ENST00000592822 TBC1D9Q6ZT07 1266 aa12.16□□□□□ -0.46
TPM4-216ENST00000592822 HDAC9Q9UKV0 1011 aa12.16□□□□□ -0.46
TPM4-216ENST00000592822 SUGT1Q9Y2Z0 365 aa12.16□□□□□ -0.46
TPM4-216ENST00000592822 PCDHAC2Q9Y5I4 1007 aa12.16□□□□□ -0.46
TPM4-216ENST00000592822 TOMM70O94826 608 aa12.15□□□□□ -0.46
TPM4-216ENST00000592822 CYP2E1P05181 493 aaPredicted RBP12.15□□□□□ -0.46
TPM4-216ENST00000592822 ATP5JP18859 108 aa12.15□□□□□ -0.46
TPM4-216ENST00000592822 NUCB1Q02818 461 aa12.15□□□□□ -0.46
TPM4-216ENST00000592822 LDHDQ86WU2 507 aa12.15□□□□□ -0.46
TPM4-216ENST00000592822 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.15□□□□□ -0.46
TPM4-216ENST00000592822 ZBED3Q96IU2 234 aaPredicted RBP12.15□□□□□ -0.46
TPM4-216ENST00000592822 LNPKQ9C0E8 428 aa12.15□□□□□ -0.46
TPM4-216ENST00000592822 ABCF2Q9UG63 623 aa12.15□□□□□ -0.46
TPM4-216ENST00000592822 PGAP2Q9UHJ9 254 aa12.15□□□□□ -0.46
TPM4-216ENST00000592822 NDUFB9Q9Y6M9 179 aa12.15□□□□□ -0.46
TPM4-216ENST00000592822 ASTN2O75129 1339 aaPredicted RBP12.14□□□□□ -0.47
TPM4-216ENST00000592822 SALL3Q9BXA9 1300 aa12.14□□□□□ -0.47
TPM4-216ENST00000592822 POLR2AP24928 1970 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms