RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 CLRN2A0PK11 232 aa25.1■■□□□ 1.61
PRKCSH-216ENST00000592445 G2E3Q7L622 706 aa25.1■■□□□ 1.61
PRKCSH-216ENST00000592445 CERS5Q8N5B7 392 aa25.1■■□□□ 1.61
PRKCSH-216ENST00000592445 MTMR14Q8NCE2 650 aa25.1■■□□□ 1.61
PRKCSH-216ENST00000592445 VEZTQ9HBM0 779 aa25.1■■□□□ 1.61
PRKCSH-216ENST00000592445 UNCXA6NJT0 531 aa25.09■■□□□ 1.61
PRKCSH-216ENST00000592445 SLC4A2P04920 1241 aa25.09■■□□□ 1.61
PRKCSH-216ENST00000592445 PTPN22Q9Y2R2 807 aa25.09■■□□□ 1.61
PRKCSH-216ENST00000592445 PCDHAC2Q9Y5I4 1007 aa25.09■■□□□ 1.61
PRKCSH-216ENST00000592445 CENPFP49454 3210 aa25.08■■□□□ 1.61
PRKCSH-216ENST00000592445 ANKRD18BA2A2Z9 1011 aa25.08■■□□□ 1.61
PRKCSH-216ENST00000592445 CSF1RP07333 972 aa25.08■■□□□ 1.61
PRKCSH-216ENST00000592445 IREB2P48200 963 aaKnown RBP25.08■■□□□ 1.61
PRKCSH-216ENST00000592445 CFAP100Q494V2 611 aa25.08■■□□□ 1.61
PRKCSH-216ENST00000592445 HABP4Q5JVS0 413 aaKnown RBP25.08■■□□□ 1.61
PRKCSH-216ENST00000592445 CD99L2Q8TCZ2 262 aa25.08■■□□□ 1.61
PRKCSH-216ENST00000592445 MYH16Q9H6N6 1097 aa25.08■■□□□ 1.61
PRKCSH-216ENST00000592445 SSC5DA1L4H1 1573 aa25.08■■□□□ 1.61
PRKCSH-216ENST00000592445 SNAP23O00161 211 aa25.07■■□□□ 1.6
PRKCSH-216ENST00000592445 TAF5LO75529 589 aa25.07■■□□□ 1.6
PRKCSH-216ENST00000592445 CRHR2Q13324 411 aa25.07■■□□□ 1.6
PRKCSH-216ENST00000592445 NBPF12Q5TAG4 269 aaPredicted RBP25.07■■□□□ 1.6
PRKCSH-216ENST00000592445 HELBQ8NG08 1087 aaPredicted RBP25.07■■□□□ 1.6
PRKCSH-216ENST00000592445 SPDYE2BA6NHP3 402 aa25.06■■□□□ 1.6
PRKCSH-216ENST00000592445 SPDYE6P0CI01 402 aa25.06■■□□□ 1.6
PRKCSH-216ENST00000592445 RBM5P52756 815 aaKnown RBP eCLIP25.06■■□□□ 1.69e-8■■□□□ 11.4
PRKCSH-216ENST00000592445 TWISTNBQ3B726 338 aaPredicted RBP25.06■■□□□ 1.6
PRKCSH-216ENST00000592445 ZNF804AQ7Z570 1209 aa25.06■■□□□ 1.6
PRKCSH-216ENST00000592445 PRMT6Q96LA8 375 aaPredicted RBP25.06■■□□□ 1.6
PRKCSH-216ENST00000592445 PRKRIP1Q9H875 184 aaPredicted RBP25.06■■□□□ 1.6
PRKCSH-216ENST00000592445 EFCC1Q9HA90 598 aa25.06■■□□□ 1.6
PRKCSH-216ENST00000592445 CASP7P55210 303 aa25.05■■□□□ 1.6
PRKCSH-216ENST00000592445 SP3Q02447 781 aa25.04■■□□□ 1.6
PRKCSH-216ENST00000592445 C15orf52Q6ZUT6 534 aaKnown RBP25.04■■□□□ 1.6
PRKCSH-216ENST00000592445 ANKRD13AQ8IZ07 590 aa25.04■■□□□ 1.6
PRKCSH-216ENST00000592445 JAG2Q9Y219 1238 aa25.04■■□□□ 1.6
PRKCSH-216ENST00000592445 CHMP3Q9Y3E7 222 aa25.04■■□□□ 1.6
PRKCSH-216ENST00000592445 USP2O75604 605 aaPredicted RBP25.03■■□□□ 1.6
PRKCSH-216ENST00000592445 IL1R1P14778 569 aa25.03■■□□□ 1.6
PRKCSH-216ENST00000592445 GJA5P36382 358 aa25.03■■□□□ 1.6
PRKCSH-216ENST00000592445 FLIIQ13045 1269 aa25.03■■□□□ 1.6
PRKCSH-216ENST00000592445 IFIT5Q13325 482 aaKnown RBP25.03■■□□□ 1.6
PRKCSH-216ENST00000592445 FKBP5Q13451 457 aaPredicted RBP25.03■■□□□ 1.6
PRKCSH-216ENST00000592445 RASA3Q14644 834 aa25.03■■□□□ 1.6
PRKCSH-216ENST00000592445 DNAAF4Q8WXU2 420 aa25.03■■□□□ 1.6
PRKCSH-216ENST00000592445 ARMC5Q96C12 935 aa25.03■■□□□ 1.6
PRKCSH-216ENST00000592445 IRS2Q9Y4H2 1338 aa25.03■■□□□ 1.6
PRKCSH-216ENST00000592445 EN2P19622 333 aaPredicted RBP25.02■■□□□ 1.6
PRKCSH-216ENST00000592445 FKBP1AP62942 108 aaKnown RBP25.02■■□□□ 1.6
PRKCSH-216ENST00000592445 LINS1Q8NG48 757 aa25.02■■□□□ 1.6
PRKCSH-216ENST00000592445 PTPN18Q99952 460 aa25.02■■□□□ 1.6
PRKCSH-216ENST00000592445 TMEM106CQ9BVX2 250 aa25.01■■□□□ 1.59
PRKCSH-216ENST00000592445 ELP3Q9H9T3 547 aa25.01■■□□□ 1.59
PRKCSH-216ENST00000592445 AOX1Q06278 1338 aa25.01■■□□□ 1.59
PRKCSH-216ENST00000592445 ECM29Q5VYK3 1845 aa25■■□□□ 1.59
PRKCSH-216ENST00000592445 OPTNQ96CV9 577 aa25■■□□□ 1.59
PRKCSH-216ENST00000592445 TESPA1A2RU30 521 aaPredicted RBP24.99■■□□□ 1.59
PRKCSH-216ENST00000592445 TNFAIP1Q13829 316 aa24.99■■□□□ 1.59
PRKCSH-216ENST00000592445 BRCA2P51587 3418 aa24.99■■□□□ 1.59
PRKCSH-216ENST00000592445 LAMB1P07942 1786 aa24.98■■□□□ 1.59
PRKCSH-216ENST00000592445 PLIN1O60240 522 aa24.98■■□□□ 1.59
PRKCSH-216ENST00000592445 ARHGEF6Q15052 776 aa24.98■■□□□ 1.59
PRKCSH-216ENST00000592445 TAF7LQ5H9L4 462 aa24.97■■□□□ 1.59
PRKCSH-216ENST00000592445 RBBP6Q7Z6E9 1792 aaKnown RBP24.97■■□□□ 1.59
PRKCSH-216ENST00000592445 KIAA0100Q14667 2235 aaKnown RBP24.97■■□□□ 1.59
PRKCSH-216ENST00000592445 FOXO4P98177 505 aa24.96■■□□□ 1.59
PRKCSH-216ENST00000592445 ZNF70Q9UC06 446 aaPredicted RBP24.96■■□□□ 1.59
PRKCSH-216ENST00000592445 CAP1Q01518 475 aa24.95■■□□□ 1.58
PRKCSH-216ENST00000592445 SPDYE2Q495Y8 402 aa24.95■■□□□ 1.58
PRKCSH-216ENST00000592445 SLC9C1Q4G0N8 1177 aa24.95■■□□□ 1.58
PRKCSH-216ENST00000592445 NBPF11Q86T75 865 aa24.95■■□□□ 1.58
PRKCSH-216ENST00000592445 WWC1Q8IX03 1113 aa24.95■■□□□ 1.58
PRKCSH-216ENST00000592445 ZFYVE28Q9HCC9 887 aa24.95■■□□□ 1.58
PRKCSH-216ENST00000592445 CNNM1Q9NRU3 951 aa24.95■■□□□ 1.58
PRKCSH-216ENST00000592445 TTF2Q9UNY4 1162 aaKnown RBP24.95■■□□□ 1.58
PRKCSH-216ENST00000592445 TAF1CQ15572 869 aaPredicted RBP24.94■■□□□ 1.58
PRKCSH-216ENST00000592445 CCDC27Q2M243 656 aa24.94■■□□□ 1.58
PRKCSH-216ENST00000592445 CCDC57Q2TAC2 916 aa24.94■■□□□ 1.58
PRKCSH-216ENST00000592445 MFSD14BQ5SR56 506 aa24.94■■□□□ 1.58
PRKCSH-216ENST00000592445 LMBR1LQ6UX01 489 aa24.94■■□□□ 1.58
PRKCSH-216ENST00000592445 LDHAL6AQ6ZMR3 332 aa24.94■■□□□ 1.58
PRKCSH-216ENST00000592445 ZNF333Q96JL9 665 aa24.94■■□□□ 1.58
PRKCSH-216ENST00000592445 MS4A4AQ96JQ5 239 aa24.94■■□□□ 1.58
PRKCSH-216ENST00000592445 TDRD3Q9H7E2 651 aaKnown RBP24.94■■□□□ 1.58
PRKCSH-216ENST00000592445 SERPINA10Q9UK55 444 aa24.94■■□□□ 1.58
PRKCSH-216ENST00000592445 CCL15-CCL14A0A0B4J2E2 113 aa24.93■■□□□ 1.58
PRKCSH-216ENST00000592445 GTF2A2P52657 109 aa24.93■■□□□ 1.58
PRKCSH-216ENST00000592445 CCL15Q16663 113 aa24.93■■□□□ 1.58
PRKCSH-216ENST00000592445 SLC4A8Q2Y0W8 1093 aa24.93■■□□□ 1.58
PRKCSH-216ENST00000592445 BRI3BPQ8WY22 251 aa24.93■■□□□ 1.58
PRKCSH-216ENST00000592445 ZNF594Q96JF6 807 aaPredicted RBP24.93■■□□□ 1.58
PRKCSH-216ENST00000592445 FAM205AQ6ZU69 1335 aa24.92■■□□□ 1.58
PRKCSH-216ENST00000592445 TCP10L2B9ZVM9 353 aa24.92■■□□□ 1.58
PRKCSH-216ENST00000592445 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.92■■□□□ 1.58
PRKCSH-216ENST00000592445 CNKSR2Q8WXI2 1034 aa24.92■■□□□ 1.58
PRKCSH-216ENST00000592445 CSADQ9Y600 493 aa24.92■■□□□ 1.58
PRKCSH-216ENST00000592445 PTCH2Q9Y6C5 1203 aa24.92■■□□□ 1.58
PRKCSH-216ENST00000592445 A0A1B0GUL6 1792 aa24.91■■□□□ 1.58
PRKCSH-216ENST00000592445 TNNI2P48788 182 aa24.91■■□□□ 1.58
PRKCSH-216ENST00000592445 FXR1P51114 621 aaKnown RBP eCLIP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms