RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 KIF23Q02241 960 aaPredicted RBP12.83□□□□□ -0.36
VMP1-214ENST00000592106 TTLL12Q14166 644 aaPredicted RBP12.83□□□□□ -0.36
VMP1-214ENST00000592106 SPOCK2Q92563 424 aa12.83□□□□□ -0.36
VMP1-214ENST00000592106 PCNTO95613 3336 aa12.82□□□□□ -0.36
VMP1-214ENST00000592106 WNT10BO00744 389 aa12.82□□□□□ -0.36
VMP1-214ENST00000592106 SLC4A10Q6U841 1118 aa12.82□□□□□ -0.36
VMP1-214ENST00000592106 LMBR1LQ6UX01 489 aa12.82□□□□□ -0.36
VMP1-214ENST00000592106 C15orf52Q6ZUT6 534 aaKnown RBP12.82□□□□□ -0.36
VMP1-214ENST00000592106 RASAL3Q86YV0 1011 aa12.82□□□□□ -0.36
VMP1-214ENST00000592106 SRCIN1Q9C0H9 1055 aa12.82□□□□□ -0.36
VMP1-214ENST00000592106 CD209Q9NNX6 404 aa12.82□□□□□ -0.36
VMP1-214ENST00000592106 CNNM1Q9NRU3 951 aa12.82□□□□□ -0.36
VMP1-214ENST00000592106 ZNF646O15015 1829 aaPredicted RBP12.82□□□□□ -0.36
VMP1-214ENST00000592106 WTIPA6NIX2 430 aaPredicted RBP12.81□□□□□ -0.36
VMP1-214ENST00000592106 CCDC85CA6NKD9 419 aa12.81□□□□□ -0.36
VMP1-214ENST00000592106 FOXO4P98177 505 aa12.81□□□□□ -0.36
VMP1-214ENST00000592106 DGKZQ13574 1117 aa12.81□□□□□ -0.36
VMP1-214ENST00000592106 NBPF9Q3BBW0 867 aa12.81□□□□□ -0.36
VMP1-214ENST00000592106 LDHAL6AQ6ZMR3 332 aa12.81□□□□□ -0.36
VMP1-214ENST00000592106 ARMC9Q7Z3E5 817 aa12.81□□□□□ -0.36
VMP1-214ENST00000592106 TXNRD3Q86VQ6 643 aa12.81□□□□□ -0.36
VMP1-214ENST00000592106 KIAA0825Q8IV33 1275 aa12.81□□□□□ -0.36
VMP1-214ENST00000592106 ZIC5Q96T25 663 aa12.81□□□□□ -0.36
VMP1-214ENST00000592106 MXD3Q9BW11 206 aa12.81□□□□□ -0.36
VMP1-214ENST00000592106 MCOLN1Q9GZU1 580 aa12.81□□□□□ -0.36
VMP1-214ENST00000592106 AKAP11Q9UKA4 1901 aa12.81□□□□□ -0.36
VMP1-214ENST00000592106 A0A1B0GUL6 1792 aa12.81□□□□□ -0.36
VMP1-214ENST00000592106 MYO1BO43795 1136 aa12.8□□□□□ -0.36
VMP1-214ENST00000592106 SASH1O94885 1247 aa12.8□□□□□ -0.36
VMP1-214ENST00000592106 KLRK1P26718 216 aa12.8□□□□□ -0.36
VMP1-214ENST00000592106 DLGAP5Q15398 846 aa12.8□□□□□ -0.36
VMP1-214ENST00000592106 TAF5LO75529 589 aa12.79□□□□□ -0.36
VMP1-214ENST00000592106 TRPA1O75762 1119 aa12.79□□□□□ -0.36
VMP1-214ENST00000592106 FKBP1AP62942 108 aaKnown RBP12.79□□□□□ -0.36
VMP1-214ENST00000592106 HELBQ8NG08 1087 aaPredicted RBP12.79□□□□□ -0.36
VMP1-214ENST00000592106 RNF186Q9NXI6 227 aa12.79□□□□□ -0.36
VMP1-214ENST00000592106 PPP2R3BQ9Y5P8 575 aa12.79□□□□□ -0.36
VMP1-214ENST00000592106 PLIN1O60240 522 aa12.78□□□□□ -0.36
VMP1-214ENST00000592106 IL1R1P14778 569 aa12.78□□□□□ -0.36
VMP1-214ENST00000592106 SREBF2Q12772 1141 aa12.78□□□□□ -0.36
VMP1-214ENST00000592106 MTMR14Q8NCE2 650 aa12.78□□□□□ -0.36
VMP1-214ENST00000592106 CSRNP1Q96S65 589 aa12.78□□□□□ -0.36
VMP1-214ENST00000592106 PTPRCP08575 1304 aa12.78□□□□□ -0.36
VMP1-214ENST00000592106 CASP8AP2Q9UKL3 1982 aa12.78□□□□□ -0.36
VMP1-214ENST00000592106 ECM29Q5VYK3 1845 aa12.77□□□□□ -0.37
VMP1-214ENST00000592106 E9PSI1 815 aa12.77□□□□□ -0.37
VMP1-214ENST00000592106 UBE2Q2LH0YL09 131 aa12.77□□□□□ -0.37
VMP1-214ENST00000592106 UBE4AQ14139 1066 aa12.77□□□□□ -0.37
VMP1-214ENST00000592106 SCAF8Q9UPN6 1271 aaKnown RBP12.77□□□□□ -0.37
VMP1-214ENST00000592106 IRS2Q9Y4H2 1338 aa12.77□□□□□ -0.37
VMP1-214ENST00000592106 F8W031 263 aaPredicted RBP12.76□□□□□ -0.37
VMP1-214ENST00000592106 SNAP23O00161 211 aa12.76□□□□□ -0.37
VMP1-214ENST00000592106 HAX1O00165 279 aa12.76□□□□□ -0.37
VMP1-214ENST00000592106 CFAP100Q494V2 611 aa12.76□□□□□ -0.37
VMP1-214ENST00000592106 EPHA10Q5JZY3 1008 aa12.76□□□□□ -0.37
VMP1-214ENST00000592106 PRAMEF18Q5VWM3 479 aa12.76□□□□□ -0.37
VMP1-214ENST00000592106 MOB2Q70IA6 237 aa12.76□□□□□ -0.37
VMP1-214ENST00000592106 SUCLG2Q96I99 432 aa12.76□□□□□ -0.37
VMP1-214ENST00000592106 ZBED3Q96IU2 234 aaPredicted RBP12.76□□□□□ -0.37
VMP1-214ENST00000592106 ZNF594Q96JF6 807 aaPredicted RBP12.76□□□□□ -0.37
VMP1-214ENST00000592106 MROH5Q6ZUA9 1318 aa12.76□□□□□ -0.37
VMP1-214ENST00000592106 ZNF521Q96K83 1311 aa12.76□□□□□ -0.37
VMP1-214ENST00000592106 UTYO14607 1347 aa12.75□□□□□ -0.37
VMP1-214ENST00000592106 PPP1R12BO60237 982 aaPredicted RBP12.75□□□□□ -0.37
VMP1-214ENST00000592106 HIBADHP31937 336 aaKnown RBP12.75□□□□□ -0.37
VMP1-214ENST00000592106 RBM5P52756 815 aaKnown RBP eCLIP12.75□□□□□ -0.37
VMP1-214ENST00000592106 NUBP1P53384 320 aa12.75□□□□□ -0.37
VMP1-214ENST00000592106 MLLT1Q03111 559 aaPredicted RBP12.75□□□□□ -0.37
VMP1-214ENST00000592106 TNFAIP1Q13829 316 aa12.75□□□□□ -0.37
VMP1-214ENST00000592106 DEFB129Q9H1M3 183 aa12.75□□□□□ -0.37
VMP1-214ENST00000592106 VEZTQ9HBM0 779 aa12.75□□□□□ -0.37
VMP1-214ENST00000592106 ANGEL1Q9UNK9 670 aaKnown RBP12.75□□□□□ -0.37
VMP1-214ENST00000592106 ARAP2Q8WZ64 1704 aa12.74□□□□□ -0.37
VMP1-214ENST00000592106 FAM205AQ6ZU69 1335 aa12.74□□□□□ -0.37
VMP1-214ENST00000592106 C19orf67A6NJJ6 358 aa12.74□□□□□ -0.37
VMP1-214ENST00000592106 PRKG1Q13976 671 aa12.74□□□□□ -0.37
VMP1-214ENST00000592106 SUPT20HL1Q3ZLR7 823 aa12.74□□□□□ -0.37
VMP1-214ENST00000592106 CTU1Q7Z7A3 348 aaKnown RBP12.74□□□□□ -0.37
VMP1-214ENST00000592106 VPS37DQ86XT2 251 aa12.74□□□□□ -0.37
VMP1-214ENST00000592106 CERS5Q8N5B7 392 aa12.74□□□□□ -0.37
VMP1-214ENST00000592106 MRPL50Q8N5N7 158 aaKnown RBP12.74□□□□□ -0.37
VMP1-214ENST00000592106 UNCXA6NJT0 531 aa12.73□□□□□ -0.37
VMP1-214ENST00000592106 FRAT2O75474 233 aaPredicted RBP12.73□□□□□ -0.37
VMP1-214ENST00000592106 NBPF7P0C2Y1 421 aaPredicted RBP12.73□□□□□ -0.37
VMP1-214ENST00000592106 RABL6Q3YEC7 729 aaPredicted RBP12.73□□□□□ -0.37
VMP1-214ENST00000592106 CAVIN4Q5BKX8 364 aa12.73□□□□□ -0.37
VMP1-214ENST00000592106 METTL24Q5JXM2 366 aa12.73□□□□□ -0.37
VMP1-214ENST00000592106 MFSD14BQ5SR56 506 aa12.73□□□□□ -0.37
VMP1-214ENST00000592106 BICC1Q9H694 974 aaKnown RBP12.73□□□□□ -0.37
VMP1-214ENST00000592106 CLRN2A0PK11 232 aa12.72□□□□□ -0.37
VMP1-214ENST00000592106 MANSC4A6NHS7 340 aaPredicted RBP12.72□□□□□ -0.37
VMP1-214ENST00000592106 ALDH1A1P00352 501 aa12.72□□□□□ -0.37
VMP1-214ENST00000592106 IREB2P48200 963 aaKnown RBP12.72□□□□□ -0.37
VMP1-214ENST00000592106 TM4SF4P48230 202 aa12.72□□□□□ -0.37
VMP1-214ENST00000592106 RGS19P49795 217 aa12.72□□□□□ -0.37
VMP1-214ENST00000592106 PTPN12Q05209 780 aaKnown RBP12.72□□□□□ -0.37
VMP1-214ENST00000592106 MKRN3Q13064 507 aaKnown RBP12.72□□□□□ -0.37
VMP1-214ENST00000592106 PKN2Q16513 984 aaKnown RBP12.72□□□□□ -0.37
VMP1-214ENST00000592106 MAP3K11Q16584 847 aa12.72□□□□□ -0.37
VMP1-214ENST00000592106 ALDH1L2Q3SY69 923 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms