RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 CEP126Q9P2H0 1117 aa20.41■□□□□ 0.86
CIRBP-233ENST00000591622 ASTN2O75129 1339 aaPredicted RBP20.41■□□□□ 0.86
CIRBP-233ENST00000591622 FAM205AQ6ZU69 1335 aa20.41■□□□□ 0.86
CIRBP-233ENST00000591622 MS4A1P11836 297 aa20.4■□□□□ 0.86
CIRBP-233ENST00000591622 PANK1Q8TE04 598 aa20.4■□□□□ 0.86
CIRBP-233ENST00000591622 HDAC9Q9UKV0 1011 aa20.4■□□□□ 0.86
CIRBP-233ENST00000591622 JAG2Q9Y219 1238 aa20.4■□□□□ 0.86
CIRBP-233ENST00000591622 SLC5A1P13866 664 aa20.39■□□□□ 0.85
CIRBP-233ENST00000591622 NBPF9Q3BBW0 867 aa20.39■□□□□ 0.85
CIRBP-233ENST00000591622 ANGEL2Q5VTE6 544 aaKnown RBP20.39■□□□□ 0.85
CIRBP-233ENST00000591622 JMYQ8N9B5 988 aa20.39■□□□□ 0.85
CIRBP-233ENST00000591622 MKRN1Q9UHC7 482 aaKnown RBP20.39■□□□□ 0.85
CIRBP-233ENST00000591622 CNTNAP1P78357 1384 aa20.38■□□□□ 0.85
CIRBP-233ENST00000591622 PNMA6EA0A0J9YXQ4 647 aa20.38■□□□□ 0.85
CIRBP-233ENST00000591622 CELF2O95319 508 aaKnown RBP20.38■□□□□ 0.85
CIRBP-233ENST00000591622 BCAMP50895 628 aa20.38■□□□□ 0.85
CIRBP-233ENST00000591622 DLK2Q6UY11 383 aa20.38■□□□□ 0.85
CIRBP-233ENST00000591622 SULF1Q8IWU6 871 aa20.38■□□□□ 0.85
CIRBP-233ENST00000591622 ABT1Q9ULW3 272 aaKnown RBP20.38■□□□□ 0.85
CIRBP-233ENST00000591622 PITPNM2Q9BZ72 1349 aa20.37■□□□□ 0.85
CIRBP-233ENST00000591622 ADM5C9JUS6 153 aa20.37■□□□□ 0.85
CIRBP-233ENST00000591622 WNT10BO00744 389 aa20.37■□□□□ 0.85
CIRBP-233ENST00000591622 ATP2B3Q16720 1220 aa20.37■□□□□ 0.85
CIRBP-233ENST00000591622 MFSD14BQ5SR56 506 aa20.37■□□□□ 0.85
CIRBP-233ENST00000591622 IQSEC3Q9UPP2 1182 aaPredicted RBP20.37■□□□□ 0.85
CIRBP-233ENST00000591622 RASSF10A6NK89 507 aa20.36■□□□□ 0.85
CIRBP-233ENST00000591622 F8W031 263 aaPredicted RBP20.36■□□□□ 0.85
CIRBP-233ENST00000591622 FRAT2O75474 233 aaPredicted RBP20.36■□□□□ 0.85
CIRBP-233ENST00000591622 ZBED3Q96IU2 234 aaPredicted RBP20.36■□□□□ 0.85
CIRBP-233ENST00000591622 ZNF408Q9H9D4 720 aa20.36■□□□□ 0.85
CIRBP-233ENST00000591622 ATP8B2P98198 1209 aa20.35■□□□□ 0.85
CIRBP-233ENST00000591622 DEFB115Q30KQ5 88 aa20.35■□□□□ 0.85
CIRBP-233ENST00000591622 C1orf115Q9H7X2 142 aa20.35■□□□□ 0.85
CIRBP-233ENST00000591622 CHAF1AQ13111 956 aaPredicted RBP20.34■□□□□ 0.85
CIRBP-233ENST00000591622 POLA2Q14181 598 aa20.34■□□□□ 0.85
CIRBP-233ENST00000591622 DLGAP5Q15398 846 aa20.34■□□□□ 0.85
CIRBP-233ENST00000591622 MTMR14Q8NCE2 650 aa20.34■□□□□ 0.85
CIRBP-233ENST00000591622 SSH3Q8TE77 659 aa20.34■□□□□ 0.85
CIRBP-233ENST00000591622 TLL2Q9Y6L7 1015 aa20.34■□□□□ 0.85
CIRBP-233ENST00000591622 TFCP2Q12800 502 aa20.33■□□□□ 0.85
CIRBP-233ENST00000591622 SAPCD2Q86UD0 394 aa20.33■□□□□ 0.85
CIRBP-233ENST00000591622 TBC1D22AQ8WUA7 517 aa20.33■□□□□ 0.85
CIRBP-233ENST00000591622 AKAP2Q9Y2D5 859 aa20.33■□□□□ 0.85
CIRBP-233ENST00000591622 VEGFBP49765 207 aa20.32■□□□□ 0.84
CIRBP-233ENST00000591622 G3BP1Q13283 466 aaKnown RBP eCLIP20.32■□□□□ 0.84
CIRBP-233ENST00000591622 CFAP100Q494V2 611 aa20.32■□□□□ 0.84
CIRBP-233ENST00000591622 CDCA5Q96FF9 252 aa20.32■□□□□ 0.84
CIRBP-233ENST00000591622 TTF2Q9UNY4 1162 aaKnown RBP20.32■□□□□ 0.84
CIRBP-233ENST00000591622 TIMM10P62072 90 aa20.31■□□□□ 0.84
CIRBP-233ENST00000591622 MVPQ14764 893 aaKnown RBP20.31■□□□□ 0.84
CIRBP-233ENST00000591622 GNL3LQ9NVN8 582 aaKnown RBP20.31■□□□□ 0.84
CIRBP-233ENST00000591622 A0A1B0GUL7 405 aa20.3■□□□□ 0.84
CIRBP-233ENST00000591622 SPDYE2BA6NHP3 402 aa20.3■□□□□ 0.84
CIRBP-233ENST00000591622 SPDYE6P0CI01 402 aa20.3■□□□□ 0.84
CIRBP-233ENST00000591622 GRIK5Q16478 980 aa20.3■□□□□ 0.84
CIRBP-233ENST00000591622 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.3■□□□□ 0.84
CIRBP-233ENST00000591622 PRMT6Q96LA8 375 aaPredicted RBP20.3■□□□□ 0.84
CIRBP-233ENST00000591622 SERPINA10Q9UK55 444 aa20.3■□□□□ 0.84
CIRBP-233ENST00000591622 DDX19BQ9UMR2 479 aa20.3■□□□□ 0.84
CIRBP-233ENST00000591622 SCAF8Q9UPN6 1271 aaKnown RBP20.3■□□□□ 0.84
CIRBP-233ENST00000591622 COG6Q9Y2V7 657 aa20.3■□□□□ 0.84
CIRBP-233ENST00000591622 PCDHAC2Q9Y5I4 1007 aa20.3■□□□□ 0.84
CIRBP-233ENST00000591622 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.3■□□□□ 0.84
CIRBP-233ENST00000591622 TRPM7Q96QT4 1865 aa20.3■□□□□ 0.84
CIRBP-233ENST00000591622 ADORA1P30542 326 aa20.29■□□□□ 0.84
CIRBP-233ENST00000591622 PHKA1P46020 1223 aa20.29■□□□□ 0.84
CIRBP-233ENST00000591622 RBM5P52756 815 aaKnown RBP eCLIP20.29■□□□□ 0.84
CIRBP-233ENST00000591622 CEP85Q6P2H3 762 aa20.29■□□□□ 0.84
CIRBP-233ENST00000591622 APOBEC3FQ8IUX4 373 aaKnown RBP20.29■□□□□ 0.84
CIRBP-233ENST00000591622 C2orf69Q8N8R5 385 aa20.29■□□□□ 0.84
CIRBP-233ENST00000591622 WDR66Q8TBY9 1149 aa20.29■□□□□ 0.84
CIRBP-233ENST00000591622 HHIPL1Q96JK4 782 aa20.29■□□□□ 0.84
CIRBP-233ENST00000591622 YTHDC1Q96MU7 727 aaKnown RBP20.29■□□□□ 0.84
CIRBP-233ENST00000591622 GBA2Q9HCG7 927 aaPredicted RBP20.29■□□□□ 0.84
CIRBP-233ENST00000591622 SEMA3EO15041 775 aa20.28■□□□□ 0.84
CIRBP-233ENST00000591622 ZBTB22O15209 634 aa20.28■□□□□ 0.84
CIRBP-233ENST00000591622 MYO1BO43795 1136 aa20.28■□□□□ 0.84
CIRBP-233ENST00000591622 SURF6O75683 361 aaKnown RBP20.28■□□□□ 0.84
CIRBP-233ENST00000591622 PDE3AQ14432 1141 aa20.28■□□□□ 0.84
CIRBP-233ENST00000591622 CCDC102BQ68D86 513 aa20.28■□□□□ 0.84
CIRBP-233ENST00000591622 PAXIP1Q6ZW49 1069 aaPredicted RBP20.28■□□□□ 0.84
CIRBP-233ENST00000591622 SUGT1Q9Y2Z0 365 aa20.28■□□□□ 0.84
CIRBP-233ENST00000591622 WDR33Q9C0J8 1336 aaKnown RBP20.27■□□□□ 0.84
CIRBP-233ENST00000591622 ECE1P42892 770 aa20.27■□□□□ 0.84
CIRBP-233ENST00000591622 HDLBPQ00341 1268 aaKnown RBP20.27■□□□□ 0.84
CIRBP-233ENST00000591622 XAGE2Q96GT9 111 aa20.27■□□□□ 0.84
CIRBP-233ENST00000591622 CAPNS2Q96L46 248 aa20.27■□□□□ 0.84
CIRBP-233ENST00000591622 NEUROD6Q96NK8 337 aa20.27■□□□□ 0.84
CIRBP-233ENST00000591622 ZBTB40Q9NUA8 1239 aa20.27■□□□□ 0.84
CIRBP-233ENST00000591622 DENND2AQ9ULE3 1009 aa20.27■□□□□ 0.84
CIRBP-233ENST00000591622 NOP58Q9Y2X3 529 aaKnown RBP20.27■□□□□ 0.84
CIRBP-233ENST00000591622 PCNTO95613 3336 aa20.27■□□□□ 0.83
CIRBP-233ENST00000591622 COL1A1P02452 1464 aaPredicted RBP20.26■□□□□ 0.83
CIRBP-233ENST00000591622 CRKP46108 304 aa20.26■□□□□ 0.83
CIRBP-233ENST00000591622 HUNKP57058 714 aa20.26■□□□□ 0.83
CIRBP-233ENST00000591622 OS9Q13438 667 aaPredicted RBP20.26■□□□□ 0.83
CIRBP-233ENST00000591622 C20orf194Q5TEA3 1177 aa20.26■□□□□ 0.83
CIRBP-233ENST00000591622 PRAMEF18Q5VWM3 479 aa20.26■□□□□ 0.83
CIRBP-233ENST00000591622 CYP4F22Q6NT55 531 aa20.26■□□□□ 0.83
CIRBP-233ENST00000591622 CHMP4BQ9H444 224 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms