RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ANKRD18AQ8IVF6 992 aa12.11□□□□□ -0.47
BRCA1-226ENST00000591534 AGBL3Q8NEM8 1001 aa12.11□□□□□ -0.47
BRCA1-226ENST00000591534 CDC5LQ99459 802 aaKnown RBP12.11□□□□□ -0.47
BRCA1-226ENST00000591534 SAGE1Q9NXZ1 904 aa12.11□□□□□ -0.47
BRCA1-226ENST00000591534 APAF1O14727 1248 aa12.1□□□□□ -0.47
BRCA1-226ENST00000591534 SLC34A2O95436 690 aa12.1□□□□□ -0.47
BRCA1-226ENST00000591534 ATP2B4P23634 1241 aa12.1□□□□□ -0.47
BRCA1-226ENST00000591534 ZNF157P51786 506 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-226ENST00000591534 MLLT1Q03111 559 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-226ENST00000591534 PODNQ7Z5L7 613 aa12.1□□□□□ -0.47
BRCA1-226ENST00000591534 STK31Q9BXU1 1019 aa12.1□□□□□ -0.47
BRCA1-226ENST00000591534 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
BRCA1-226ENST00000591534 THSD7BQ9C0I4 1608 aa12.1□□□□□ -0.47
BRCA1-226ENST00000591534 XDHP47989 1333 aa12.1□□□□□ -0.47
BRCA1-226ENST00000591534 TRPM7Q96QT4 1865 aa12.09□□□□□ -0.47
BRCA1-226ENST00000591534 SHTN1A0MZ66 631 aa12.09□□□□□ -0.47
BRCA1-226ENST00000591534 ELL2O00472 640 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-226ENST00000591534 FECHP22830 423 aa12.09□□□□□ -0.47
BRCA1-226ENST00000591534 MMP14P50281 582 aa12.09□□□□□ -0.47
BRCA1-226ENST00000591534 FKBP1BP68106 108 aa12.09□□□□□ -0.47
BRCA1-226ENST00000591534 RSBN1LQ6PCB5 846 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-226ENST00000591534 METTL22Q9BUU2 404 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-226ENST00000591534 PHAXQ9H814 394 aaKnown RBP12.09□□□□□ -0.47
BRCA1-226ENST00000591534 RTL9Q8NET4 1388 aa12.08□□□□□ -0.48
BRCA1-226ENST00000591534 USP17L3A6NCW0 530 aa12.08□□□□□ -0.48
BRCA1-226ENST00000591534 USP17L4A6NCW7 530 aa12.08□□□□□ -0.48
BRCA1-226ENST00000591534 TRIM66O15016 1216 aa12.08□□□□□ -0.48
BRCA1-226ENST00000591534 ANP32CO43423 234 aa12.08□□□□□ -0.48
BRCA1-226ENST00000591534 USP17L8P0C7I0 530 aa12.08□□□□□ -0.48
BRCA1-226ENST00000591534 DGKZQ13574 1117 aa12.08□□□□□ -0.48
BRCA1-226ENST00000591534 USP17L1Q7RTZ2 530 aa12.08□□□□□ -0.48
BRCA1-226ENST00000591534 OGFOD1Q8N543 542 aa12.08□□□□□ -0.48
BRCA1-226ENST00000591534 MCOLN1Q9GZU1 580 aa12.08□□□□□ -0.48
BRCA1-226ENST00000591534 SEC31BQ9NQW1 1179 aa12.08□□□□□ -0.48
BRCA1-226ENST00000591534 GGA3Q9NZ52 723 aa12.08□□□□□ -0.48
BRCA1-226ENST00000591534 ADM5C9JUS6 153 aa12.07□□□□□ -0.48
BRCA1-226ENST00000591534 RGS19P49795 217 aa12.07□□□□□ -0.48
BRCA1-226ENST00000591534 ZNF280AP59817 542 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-226ENST00000591534 SCARF1Q14162 830 aa12.07□□□□□ -0.48
BRCA1-226ENST00000591534 FAM161AQ3B820 660 aa12.07□□□□□ -0.48
BRCA1-226ENST00000591534 KSR2Q6VAB6 950 aa12.07□□□□□ -0.48
BRCA1-226ENST00000591534 KCNQ5Q9NR82 932 aa12.07□□□□□ -0.48
BRCA1-226ENST00000591534 DUOX1Q9NRD9 1551 aa12.07□□□□□ -0.48
BRCA1-226ENST00000591534 MAP3K2Q9Y2U5 619 aa12.07□□□□□ -0.48
BRCA1-226ENST00000591534 PCDHGA4Q9Y5G9 962 aa12.07□□□□□ -0.48
BRCA1-226ENST00000591534 PITPNM2Q9BZ72 1349 aa12.07□□□□□ -0.48
BRCA1-226ENST00000591534 LRRC37AA6NMS7 1700 aa12.06□□□□□ -0.48
BRCA1-226ENST00000591534 LAMB2P55268 1798 aa12.06□□□□□ -0.48
BRCA1-226ENST00000591534 EGFRP00533 1210 aa12.06□□□□□ -0.48
BRCA1-226ENST00000591534 CTSWP56202 376 aa12.06□□□□□ -0.48
BRCA1-226ENST00000591534 KIF23Q02241 960 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-226ENST00000591534 ANGEL2Q5VTE6 544 aaKnown RBP12.06□□□□□ -0.48
BRCA1-226ENST00000591534 CDCA5Q96FF9 252 aa12.06□□□□□ -0.48
BRCA1-226ENST00000591534 MYOZ2Q9NPC6 264 aa12.06□□□□□ -0.48
BRCA1-226ENST00000591534 BSDC1Q9NW68 430 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-226ENST00000591534 MYO3BQ8WXR4 1341 aa12.06□□□□□ -0.48
BRCA1-226ENST00000591534 ZNF609O15014 1411 aa12.05□□□□□ -0.48
BRCA1-226ENST00000591534 PI4KAP2A4QPH2 592 aa12.05□□□□□ -0.48
BRCA1-226ENST00000591534 FAM155AB1AL88 458 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-226ENST00000591534 SLC10A3P09131 477 aa12.05□□□□□ -0.48
BRCA1-226ENST00000591534 NF2P35240 595 aa12.05□□□□□ -0.48
BRCA1-226ENST00000591534 IGHMBP2P38935 993 aaKnown RBP12.05□□□□□ -0.48
BRCA1-226ENST00000591534 PI4KAP1Q8N8J0 262 aa12.05□□□□□ -0.48
BRCA1-226ENST00000591534 C8orf58Q8NAV2 365 aa12.05□□□□□ -0.48
BRCA1-226ENST00000591534 CCDC85AQ96PX6 553 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-226ENST00000591534 PDE4DQ08499 809 aa12.04□□□□□ -0.48
BRCA1-226ENST00000591534 ANKRD2Q9GZV1 360 aa12.04□□□□□ -0.48
BRCA1-226ENST00000591534 COA1Q9GZY4 146 aa12.04□□□□□ -0.48
BRCA1-226ENST00000591534 RNF186Q9NXI6 227 aa12.04□□□□□ -0.48
BRCA1-226ENST00000591534 LEMD3Q9Y2U8 911 aa12.04□□□□□ -0.48
BRCA1-226ENST00000591534 MED23Q9ULK4 1368 aa12.04□□□□□ -0.48
BRCA1-226ENST00000591534 DDX60Q8IY21 1712 aaKnown RBP12.03□□□□□ -0.48
BRCA1-226ENST00000591534 TRPA1O75762 1119 aa12.03□□□□□ -0.48
BRCA1-226ENST00000591534 CCDC27Q2M243 656 aa12.03□□□□□ -0.48
BRCA1-226ENST00000591534 STRIP1Q5VSL9 837 aa12.03□□□□□ -0.48
BRCA1-226ENST00000591534 DLK2Q6UY11 383 aa12.03□□□□□ -0.48
BRCA1-226ENST00000591534 TTLL11Q8NHH1 800 aa12.03□□□□□ -0.48
BRCA1-226ENST00000591534 GMLQ99445 158 aa12.03□□□□□ -0.48
BRCA1-226ENST00000591534 MPHOSPH8Q99549 860 aa12.03□□□□□ -0.48
BRCA1-226ENST00000591534 MYH16Q9H6N6 1097 aa12.03□□□□□ -0.48
BRCA1-226ENST00000591534 HDAC9Q9UKV0 1011 aa12.03□□□□□ -0.48
BRCA1-226ENST00000591534 MINPP1Q9UNW1 487 aa12.03□□□□□ -0.48
BRCA1-226ENST00000591534 KCNJ4P48050 445 aa12.02□□□□□ -0.49
BRCA1-226ENST00000591534 CCT4P50991 539 aaKnown RBP12.02□□□□□ -0.49
BRCA1-226ENST00000591534 TTLL12Q14166 644 aaPredicted RBP12.02□□□□□ -0.49
BRCA1-226ENST00000591534 SLAIN1Q8ND83 568 aa12.02□□□□□ -0.49
BRCA1-226ENST00000591534 JARID2Q92833 1246 aaPredicted RBP12.02□□□□□ -0.49
BRCA1-226ENST00000591534 FBXW7Q969H0 707 aa12.02□□□□□ -0.49
BRCA1-226ENST00000591534 CSRNP1Q96S65 589 aa12.02□□□□□ -0.49
BRCA1-226ENST00000591534 ZIC5Q96T25 663 aa12.02□□□□□ -0.49
BRCA1-226ENST00000591534 CDHR5Q9HBB8 845 aa12.02□□□□□ -0.49
BRCA1-226ENST00000591534 NEURL1BA8MQ27 555 aa12.01□□□□□ -0.49
BRCA1-226ENST00000591534 IGKV5-2P06315 115 aa12.01□□□□□ -0.49
BRCA1-226ENST00000591534 PKN2Q16513 984 aaKnown RBP12.01□□□□□ -0.49
BRCA1-226ENST00000591534 TWISTNBQ3B726 338 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-226ENST00000591534 CTU1Q7Z7A3 348 aaKnown RBP12.01□□□□□ -0.49
BRCA1-226ENST00000591534 KHSRPQ92945 711 aaKnown RBP eCLIP12.01□□□□□ -0.494e-9■■■□□ 15.2
BRCA1-226ENST00000591534 GREM2Q9H772 168 aa12.01□□□□□ -0.49
BRCA1-226ENST00000591534 PCDHGA10Q9Y5H3 936 aa12.01□□□□□ -0.49
BRCA1-226ENST00000591534 H7C1W4 665 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms