RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 RHPN1Q8TCX5 695 aa23.11■■□□□ 1.29
MBD1-223ENST00000590215 MXD3Q9BW11 206 aa23.11■■□□□ 1.29
MBD1-223ENST00000590215 SHTN1A0MZ66 631 aa23.1■■□□□ 1.29
MBD1-223ENST00000590215 H7C1D1 291 aa23.1■■□□□ 1.29
MBD1-223ENST00000590215 PHKA1P46020 1223 aa23.1■■□□□ 1.29
MBD1-223ENST00000590215 CCDC102BQ68D86 513 aa23.1■■□□□ 1.29
MBD1-223ENST00000590215 EXOC6Q8TAG9 804 aa23.1■■□□□ 1.29
MBD1-223ENST00000590215 FBXW7Q969H0 707 aa23.1■■□□□ 1.29
MBD1-223ENST00000590215 KIF1BPQ96EK5 621 aa23.1■■□□□ 1.29
MBD1-223ENST00000590215 NEUROD6Q96NK8 337 aa23.1■■□□□ 1.29
MBD1-223ENST00000590215 DCTPP1Q9H773 170 aa23.1■■□□□ 1.29
MBD1-223ENST00000590215 GNL3LQ9NVN8 582 aaKnown RBP23.1■■□□□ 1.29
MBD1-223ENST00000590215 SEMA3EO15041 775 aa23.09■■□□□ 1.29
MBD1-223ENST00000590215 USP17L8P0C7I0 530 aa23.09■■□□□ 1.29
MBD1-223ENST00000590215 IQSEC3Q9UPP2 1182 aaPredicted RBP23.09■■□□□ 1.29
MBD1-223ENST00000590215 ADAMTSL1Q8N6G6 1762 aa23.09■■□□□ 1.29
MBD1-223ENST00000590215 POTEIP0CG38 1075 aa23.08■■□□□ 1.29
MBD1-223ENST00000590215 POTEJP0CG39 1038 aa23.08■■□□□ 1.29
MBD1-223ENST00000590215 LDHDQ86WU2 507 aa23.08■■□□□ 1.29
MBD1-223ENST00000590215 EAF2Q96CJ1 260 aaPredicted RBP23.08■■□□□ 1.29
MBD1-223ENST00000590215 FRAT2O75474 233 aaPredicted RBP23.07■■□□□ 1.28
MBD1-223ENST00000590215 HIRAP54198 1017 aaPredicted RBP23.07■■□□□ 1.28
MBD1-223ENST00000590215 MFSD14BQ5SR56 506 aa23.07■■□□□ 1.28
MBD1-223ENST00000590215 TBC1D22AQ8WUA7 517 aa23.07■■□□□ 1.28
MBD1-223ENST00000590215 JAG2Q9Y219 1238 aa23.07■■□□□ 1.28
MBD1-223ENST00000590215 PDS5AQ29RF7 1337 aaKnown RBP23.07■■□□□ 1.28
MBD1-223ENST00000590215 COL1A1P02452 1464 aaPredicted RBP23.06■■□□□ 1.28
MBD1-223ENST00000590215 HDAC1Q13547 482 aaPredicted RBP23.06■■□□□ 1.28
MBD1-223ENST00000590215 EAPPQ56P03 285 aaPredicted RBP23.06■■□□□ 1.28
MBD1-223ENST00000590215 TRPM4Q8TD43 1214 aa23.06■■□□□ 1.28
MBD1-223ENST00000590215 DBNDD2Q9BQY9 259 aa23.06■■□□□ 1.28
MBD1-223ENST00000590215 PGAP2Q9UHJ9 254 aa23.06■■□□□ 1.28
MBD1-223ENST00000590215 DENND2AQ9ULE3 1009 aa23.06■■□□□ 1.28
MBD1-223ENST00000590215 ARID4AP29374 1257 aaPredicted RBP23.05■■□□□ 1.28
MBD1-223ENST00000590215 FSTL1Q12841 308 aa23.05■■□□□ 1.28
MBD1-223ENST00000590215 CHAF1AQ13111 956 aaPredicted RBP23.05■■□□□ 1.28
MBD1-223ENST00000590215 SAMD7Q7Z3H4 446 aa23.05■■□□□ 1.28
MBD1-223ENST00000590215 OGFOD1Q8N543 542 aa23.05■■□□□ 1.28
MBD1-223ENST00000590215 SMC1BQ8NDV3 1235 aa23.05■■□□□ 1.28
MBD1-223ENST00000590215 WDR66Q8TBY9 1149 aa23.05■■□□□ 1.28
MBD1-223ENST00000590215 ZC3H15Q8WU90 426 aaKnown RBP23.05■■□□□ 1.28
MBD1-223ENST00000590215 DBNLQ9UJU6 430 aaKnown RBP23.05■■□□□ 1.28
MBD1-223ENST00000590215 EGFRP00533 1210 aa23.04■■□□□ 1.28
MBD1-223ENST00000590215 RASGRF1Q13972 1273 aa23.04■■□□□ 1.28
MBD1-223ENST00000590215 GORABQ5T7V8 394 aa23.04■■□□□ 1.28
MBD1-223ENST00000590215 CHADLQ6NUI6 762 aa23.04■■□□□ 1.28
MBD1-223ENST00000590215 KIAA0825Q8IV33 1275 aa23.04■■□□□ 1.28
MBD1-223ENST00000590215 CLASRPQ8N2M8 674 aaKnown RBP23.04■■□□□ 1.28
MBD1-223ENST00000590215 ZNF512BQ96KM6 892 aaPredicted RBP23.04■■□□□ 1.28
MBD1-223ENST00000590215 IL1RAPL2Q9NP60 686 aa23.04■■□□□ 1.28
MBD1-223ENST00000590215 MYOZ2Q9NPC6 264 aa23.04■■□□□ 1.28
MBD1-223ENST00000590215 SUGT1Q9Y2Z0 365 aa23.04■■□□□ 1.28
MBD1-223ENST00000590215 SALL1Q9NSC2 1324 aa23.04■■□□□ 1.28
MBD1-223ENST00000590215 C1QTNF8P60827 252 aa23.03■■□□□ 1.28
MBD1-223ENST00000590215 KIF4BQ2VIQ3 1234 aa23.03■■□□□ 1.28
MBD1-223ENST00000590215 TBC1D10BQ4KMP7 808 aaPredicted RBP23.03■■□□□ 1.28
MBD1-223ENST00000590215 AACSQ86V21 672 aa23.03■■□□□ 1.28
MBD1-223ENST00000590215 CCDC8Q9H0W5 538 aaPredicted RBP23.03■■□□□ 1.28
MBD1-223ENST00000590215 HDAC9Q9UKV0 1011 aa23.03■■□□□ 1.28
MBD1-223ENST00000590215 APBB1O00213 710 aa23.02■■□□□ 1.28
MBD1-223ENST00000590215 UQCRFS1P1P0C7P4 283 aa23.02■■□□□ 1.28
MBD1-223ENST00000590215 MTMR14Q8NCE2 650 aa23.02■■□□□ 1.28
MBD1-223ENST00000590215 ZBED3Q96IU2 234 aaPredicted RBP23.02■■□□□ 1.28
MBD1-223ENST00000590215 LRRCC1Q9C099 1032 aa23.02■■□□□ 1.28
MBD1-223ENST00000590215 TLR7Q9NYK1 1049 aaKnown RBP23.02■■□□□ 1.28
MBD1-223ENST00000590215 CCDC158Q5M9N0 1113 aa23.01■■□□□ 1.27
MBD1-223ENST00000590215 IRX6P78412 446 aaPredicted RBP23■■□□□ 1.27
MBD1-223ENST00000590215 GRIK5Q16478 980 aa23■■□□□ 1.27
MBD1-223ENST00000590215 RBM26Q5T8P6 1007 aaKnown RBP23■■□□□ 1.27
MBD1-223ENST00000590215 MRIQ9BWK5 157 aa23■■□□□ 1.27
MBD1-223ENST00000590215 HMG20BQ9P0W2 317 aa23■■□□□ 1.27
MBD1-223ENST00000590215 CLEC11AQ9Y240 323 aa23■■□□□ 1.27
MBD1-223ENST00000590215 MYH13Q9UKX3 1938 aa23■■□□□ 1.27
MBD1-223ENST00000590215 MCAMP43121 646 aa22.99■■□□□ 1.27
MBD1-223ENST00000590215 HDLBPQ00341 1268 aaKnown RBP22.99■■□□□ 1.27
MBD1-223ENST00000590215 TTC39AQ5SRH9 613 aa22.99■■□□□ 1.27
MBD1-223ENST00000590215 SERPINA10Q9UK55 444 aa22.99■■□□□ 1.27
MBD1-223ENST00000590215 TTF2Q9UNY4 1162 aaKnown RBP22.99■■□□□ 1.27
MBD1-223ENST00000590215 F8W031 263 aaPredicted RBP22.98■■□□□ 1.27
MBD1-223ENST00000590215 WNT10BO00744 389 aa22.98■■□□□ 1.27
MBD1-223ENST00000590215 ITGBL1O95965 494 aaPredicted RBP22.98■■□□□ 1.27
MBD1-223ENST00000590215 SCARF1Q14162 830 aa22.98■■□□□ 1.27
MBD1-223ENST00000590215 ZGPATQ8N5A5 531 aaKnown RBP22.98■■□□□ 1.27
MBD1-223ENST00000590215 SPATA5Q8NB90 893 aa22.98■■□□□ 1.27
MBD1-223ENST00000590215 MAP1SQ66K74 1059 aaPredicted RBP22.97■■□□□ 1.27
MBD1-223ENST00000590215 CNTROBQ8N137 903 aa22.97■■□□□ 1.27
MBD1-223ENST00000590215 GCC1Q96CN9 775 aa22.97■■□□□ 1.27
MBD1-223ENST00000590215 RWDD1Q9H446 243 aaPredicted RBP22.97■■□□□ 1.27
MBD1-223ENST00000590215 SMARCA5O60264 1052 aaPredicted RBP22.96■■□□□ 1.27
MBD1-223ENST00000590215 IFIT2P09913 472 aaKnown RBP22.96■■□□□ 1.27
MBD1-223ENST00000590215 NBPF9Q3BBW0 867 aa22.96■■□□□ 1.27
MBD1-223ENST00000590215 PI16Q6UXB8 463 aa22.96■■□□□ 1.27
MBD1-223ENST00000590215 MAST3O60307 1309 aa22.96■■□□□ 1.27
MBD1-223ENST00000590215 AKAP11Q9UKA4 1901 aa22.96■■□□□ 1.27
MBD1-223ENST00000590215 PRDX5P30044 214 aa22.95■■□□□ 1.26
MBD1-223ENST00000590215 DLGAP5Q15398 846 aa22.95■■□□□ 1.26
MBD1-223ENST00000590215 CFAP100Q494V2 611 aa22.95■■□□□ 1.26
MBD1-223ENST00000590215 PITPNM2Q9BZ72 1349 aa22.95■■□□□ 1.26
MBD1-223ENST00000590215 ASTN2O75129 1339 aaPredicted RBP22.94■■□□□ 1.26
MBD1-223ENST00000590215 PASKQ96RG2 1323 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms