RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 MTMR14Q8NCE2 650 aa18.07■□□□□ 0.48
MBD1-220ENST00000589758 ZBED3Q96IU2 234 aaPredicted RBP18.07■□□□□ 0.48
MBD1-220ENST00000589758 BICC1Q9H694 974 aaKnown RBP18.07■□□□□ 0.48
MBD1-220ENST00000589758 SAGE1Q9NXZ1 904 aa18.07■□□□□ 0.48
MBD1-220ENST00000589758 SCAF8Q9UPN6 1271 aaKnown RBP18.07■□□□□ 0.48
MBD1-220ENST00000589758 CT47B1P0C2W7 299 aaPredicted RBP18.06■□□□□ 0.48
MBD1-220ENST00000589758 RASAL3Q86YV0 1011 aa18.06■□□□□ 0.48
MBD1-220ENST00000589758 CERS5Q8N5B7 392 aa18.06■□□□□ 0.48
MBD1-220ENST00000589758 RIPOR2Q9Y4F9 1068 aa18.06■□□□□ 0.48
MBD1-220ENST00000589758 TTLL12Q14166 644 aaPredicted RBP18.05■□□□□ 0.48
MBD1-220ENST00000589758 PRAMEF18Q5VWM3 479 aa18.05■□□□□ 0.48
MBD1-220ENST00000589758 TRMT2AQ8IZ69 625 aaKnown RBP18.05■□□□□ 0.48
MBD1-220ENST00000589758 CDCA7LQ96GN5 454 aa18.05■□□□□ 0.48
MBD1-220ENST00000589758 ABHD8Q96I13 439 aa18.05■□□□□ 0.48
MBD1-220ENST00000589758 PUS3Q9BZE2 481 aaKnown RBP18.05■□□□□ 0.48
MBD1-220ENST00000589758 FAM205AQ6ZU69 1335 aa18.04■□□□□ 0.48
MBD1-220ENST00000589758 COL1A1P02452 1464 aaPredicted RBP18.04■□□□□ 0.48
MBD1-220ENST00000589758 UBE2Q2LH0YL09 131 aa18.04■□□□□ 0.48
MBD1-220ENST00000589758 MYO1BO43795 1136 aa18.04■□□□□ 0.48
MBD1-220ENST00000589758 HIBADHP31937 336 aaKnown RBP18.04■□□□□ 0.48
MBD1-220ENST00000589758 ARMC9Q7Z3E5 817 aa18.04■□□□□ 0.48
MBD1-220ENST00000589758 TDRD7Q8NHU6 1098 aaKnown RBP18.04■□□□□ 0.48
MBD1-220ENST00000589758 CSRNP1Q96S65 589 aa18.04■□□□□ 0.48
MBD1-220ENST00000589758 SMC4Q9NTJ3 1288 aa18.04■□□□□ 0.48
MBD1-220ENST00000589758 F8W031 263 aaPredicted RBP18.03■□□□□ 0.48
MBD1-220ENST00000589758 ANKRD44Q8N8A2 993 aa18.03■□□□□ 0.48
MBD1-220ENST00000589758 FAM84BQ96KN1 310 aaPredicted RBP18.03■□□□□ 0.48
MBD1-220ENST00000589758 USP44Q9H0E7 712 aa18.03■□□□□ 0.48
MBD1-220ENST00000589758 AKAP11Q9UKA4 1901 aa18.02■□□□□ 0.48
MBD1-220ENST00000589758 CFAP100Q494V2 611 aa18.02■□□□□ 0.48
MBD1-220ENST00000589758 METTL24Q5JXM2 366 aa18.02■□□□□ 0.48
MBD1-220ENST00000589758 MOB2Q70IA6 237 aa18.02■□□□□ 0.48
MBD1-220ENST00000589758 RNF186Q9NXI6 227 aa18.02■□□□□ 0.48
MBD1-220ENST00000589758 PPP2R3BQ9Y5P8 575 aa18.02■□□□□ 0.48
MBD1-220ENST00000589758 ECM29Q5VYK3 1845 aa18.01■□□□□ 0.47
MBD1-220ENST00000589758 SPDYE2BA6NHP3 402 aa18.01■□□□□ 0.47
MBD1-220ENST00000589758 TRPA1O75762 1119 aa18.01■□□□□ 0.47
MBD1-220ENST00000589758 SPDYE6P0CI01 402 aa18.01■□□□□ 0.47
MBD1-220ENST00000589758 GYG1P46976 350 aa18.01■□□□□ 0.47
MBD1-220ENST00000589758 LRRC24Q50LG9 513 aa18.01■□□□□ 0.47
MBD1-220ENST00000589758 DEFB129Q9H1M3 183 aa18.01■□□□□ 0.47
MBD1-220ENST00000589758 PDE8BO95263 885 aa18■□□□□ 0.47
MBD1-220ENST00000589758 RBM5P52756 815 aaKnown RBP eCLIP18■□□□□ 0.47
MBD1-220ENST00000589758 CAVIN4Q5BKX8 364 aa18■□□□□ 0.47
MBD1-220ENST00000589758 MFSD14BQ5SR56 506 aa18■□□□□ 0.47
MBD1-220ENST00000589758 VPS37DQ86XT2 251 aa18■□□□□ 0.47
MBD1-220ENST00000589758 PRMT6Q96LA8 375 aaPredicted RBP18■□□□□ 0.47
MBD1-220ENST00000589758 JAG2Q9Y219 1238 aa18■□□□□ 0.47
MBD1-220ENST00000589758 CASP8AP2Q9UKL3 1982 aa18■□□□□ 0.47
MBD1-220ENST00000589758 FBXO33Q7Z6M2 555 aa17.99■□□□□ 0.47
MBD1-220ENST00000589758 VGLL2Q8N8G2 317 aa17.99■□□□□ 0.47
MBD1-220ENST00000589758 PRKG1Q13976 671 aa17.98■□□□□ 0.47
MBD1-220ENST00000589758 SUPT20HL1Q3ZLR7 823 aa17.98■□□□□ 0.47
MBD1-220ENST00000589758 SERPINA10Q9UK55 444 aa17.98■□□□□ 0.47
MBD1-220ENST00000589758 ANGEL1Q9UNK9 670 aaKnown RBP17.98■□□□□ 0.47
MBD1-220ENST00000589758 TTF2Q9UNY4 1162 aaKnown RBP17.98■□□□□ 0.47
MBD1-220ENST00000589758 HDAC5Q9UQL6 1122 aa17.98■□□□□ 0.47
MBD1-220ENST00000589758 PCDHAC2Q9Y5I4 1007 aa17.98■□□□□ 0.47
MBD1-220ENST00000589758 CLRN2A0PK11 232 aa17.97■□□□□ 0.47
MBD1-220ENST00000589758 PPP1R12BO60237 982 aaPredicted RBP17.97■□□□□ 0.47
MBD1-220ENST00000589758 FRAT2O75474 233 aaPredicted RBP17.97■□□□□ 0.47
MBD1-220ENST00000589758 UBTFL1P0CB47 393 aaPredicted RBP17.97■□□□□ 0.47
MBD1-220ENST00000589758 PTPN12Q05209 780 aaKnown RBP17.97■□□□□ 0.47
MBD1-220ENST00000589758 DGKZQ13574 1117 aa17.97■□□□□ 0.47
MBD1-220ENST00000589758 LDLRAD1Q5T700 205 aa17.97■□□□□ 0.47
MBD1-220ENST00000589758 KLHDC4Q8TBB5 520 aa17.97■□□□□ 0.47
MBD1-220ENST00000589758 TBC1D22AQ8WUA7 517 aa17.97■□□□□ 0.47
MBD1-220ENST00000589758 API5Q9BZZ5 524 aaKnown RBP17.97■□□□□ 0.47
MBD1-220ENST00000589758 MCOLN1Q9GZU1 580 aa17.97■□□□□ 0.47
MBD1-220ENST00000589758 VEZTQ9HBM0 779 aa17.97■□□□□ 0.47
MBD1-220ENST00000589758 NOB1Q9ULX3 412 aaKnown RBP17.97■□□□□ 0.47
MBD1-220ENST00000589758 KIF16BQ96L93 1317 aa17.97■□□□□ 0.47
MBD1-220ENST00000589758 UNCXA6NJT0 531 aa17.96■□□□□ 0.47
MBD1-220ENST00000589758 EYA2O00167 538 aa17.96■□□□□ 0.47
MBD1-220ENST00000589758 IFIT1P09914 478 aaKnown RBP17.96■□□□□ 0.47
MBD1-220ENST00000589758 TM4SF4P48230 202 aa17.96■□□□□ 0.47
MBD1-220ENST00000589758 TNFAIP1Q13829 316 aa17.96■□□□□ 0.47
MBD1-220ENST00000589758 PUM3Q15397 648 aaKnown RBP17.96■□□□□ 0.47
MBD1-220ENST00000589758 MAP3K11Q16584 847 aa17.96■□□□□ 0.47
MBD1-220ENST00000589758 ARAP2Q8WZ64 1704 aa17.95■□□□□ 0.46
MBD1-220ENST00000589758 CCDC85CA6NKD9 419 aa17.95■□□□□ 0.46
MBD1-220ENST00000589758 HDLBPQ00341 1268 aaKnown RBP17.95■□□□□ 0.46
MBD1-220ENST00000589758 SREBF2Q12772 1141 aa17.95■□□□□ 0.46
MBD1-220ENST00000589758 FBXO3Q9UK99 471 aa17.95■□□□□ 0.46
MBD1-220ENST00000589758 FGFR2P21802 821 aa17.94■□□□□ 0.46
MBD1-220ENST00000589758 RFX5P48382 616 aaPredicted RBP17.94■□□□□ 0.46
MBD1-220ENST00000589758 RASA3Q14644 834 aa17.94■□□□□ 0.46
MBD1-220ENST00000589758 SPDYE2Q495Y8 402 aa17.94■□□□□ 0.46
MBD1-220ENST00000589758 DZIP1LQ8IYY4 767 aaKnown RBP17.94■□□□□ 0.46
MBD1-220ENST00000589758 SLC10A4Q96EP9 437 aa17.94■□□□□ 0.46
MBD1-220ENST00000589758 IQSEC3Q9UPP2 1182 aaPredicted RBP17.94■□□□□ 0.46
MBD1-220ENST00000589758 SLC5A1P13866 664 aa17.93■□□□□ 0.46
MBD1-220ENST00000589758 CRKP46108 304 aa17.93■□□□□ 0.46
MBD1-220ENST00000589758 BCAMP50895 628 aa17.93■□□□□ 0.46
MBD1-220ENST00000589758 RARSP54136 660 aaKnown RBP17.93■□□□□ 0.46
MBD1-220ENST00000589758 HNRNPUQ00839 825 aaKnown RBP eCLIP17.93■□□□□ 0.46
MBD1-220ENST00000589758 CHAF1AQ13111 956 aaPredicted RBP17.93■□□□□ 0.46
MBD1-220ENST00000589758 NBPF12Q5TAG4 269 aaPredicted RBP17.93■□□□□ 0.46
MBD1-220ENST00000589758 LPIN2Q92539 896 aa17.93■□□□□ 0.46
MBD1-220ENST00000589758 ARHGAP45Q92619 1136 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms