RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 GPC1P35052 558 aa10.89□□□□□ -0.67
ATG4D-210ENST00000588972 C4orf17Q53FE4 359 aa10.89□□□□□ -0.67
ATG4D-210ENST00000588972 GNASQ5JWF2 1037 aa10.89□□□□□ -0.67
ATG4D-210ENST00000588972 ZNF598Q86UK7 904 aaKnown RBP10.89□□□□□ -0.67
ATG4D-210ENST00000588972 RHPN1Q8TCX5 695 aa10.89□□□□□ -0.67
ATG4D-210ENST00000588972 FRMD6Q96NE9 622 aa10.89□□□□□ -0.67
ATG4D-210ENST00000588972 TINF2Q9BSI4 451 aa10.89□□□□□ -0.67
ATG4D-210ENST00000588972 DNAJC25Q9H1X3 360 aa10.89□□□□□ -0.67
ATG4D-210ENST00000588972 TECPR2O15040 1411 aa10.89□□□□□ -0.67
ATG4D-210ENST00000588972 BRWD3Q6RI45 1802 aa10.88□□□□□ -0.67
ATG4D-210ENST00000588972 TGFBR3LH3BV60 316 aa10.88□□□□□ -0.67
ATG4D-210ENST00000588972 J3QL48 77 aa10.88□□□□□ -0.67
ATG4D-210ENST00000588972 RPLP1P05386 114 aaKnown RBP10.88□□□□□ -0.67
ATG4D-210ENST00000588972 NEFLP07196 543 aa10.88□□□□□ -0.67
ATG4D-210ENST00000588972 CTSHP09668 335 aa10.88□□□□□ -0.67
ATG4D-210ENST00000588972 KNDC1Q76NI1 1749 aa10.88□□□□□ -0.67
ATG4D-210ENST00000588972 TTC16Q8NEE8 873 aa10.88□□□□□ -0.67
ATG4D-210ENST00000588972 CRELD1Q96HD1 420 aa10.88□□□□□ -0.67
ATG4D-210ENST00000588972 CCDC144AA2RUR9 1427 aa10.87□□□□□ -0.67
ATG4D-210ENST00000588972 OPLAHO14841 1288 aa10.87□□□□□ -0.67
ATG4D-210ENST00000588972 HIF1AQ16665 826 aa10.87□□□□□ -0.67
ATG4D-210ENST00000588972 SLC27A3Q5K4L6 730 aa10.87□□□□□ -0.67
ATG4D-210ENST00000588972 UNC5CLQ8IV45 518 aa10.87□□□□□ -0.67
ATG4D-210ENST00000588972 MEIOBQ8N635 442 aa10.87□□□□□ -0.67
ATG4D-210ENST00000588972 KLRG1Q96E93 195 aa10.87□□□□□ -0.67
ATG4D-210ENST00000588972 DMGDHQ9UI17 866 aaKnown RBP10.87□□□□□ -0.67
ATG4D-210ENST00000588972 FMN2Q9NZ56 1722 aa10.87□□□□□ -0.67
ATG4D-210ENST00000588972 NWD2Q9ULI1 1742 aa10.87□□□□□ -0.67
ATG4D-210ENST00000588972 PLCH1Q4KWH8 1693 aa10.86□□□□□ -0.67
ATG4D-210ENST00000588972 CPNE3O75131 537 aaKnown RBP10.86□□□□□ -0.67
ATG4D-210ENST00000588972 CCSER2Q9H7U1 834 aa10.86□□□□□ -0.67
ATG4D-210ENST00000588972 ZDHHC3Q9NYG2 299 aa10.86□□□□□ -0.67
ATG4D-210ENST00000588972 ABCA3Q99758 1704 aa10.85□□□□□ -0.67
ATG4D-210ENST00000588972 RNF144AP50876 292 aaPredicted RBP10.85□□□□□ -0.67
ATG4D-210ENST00000588972 NBPF1Q3BBV0 1214 aa10.85□□□□□ -0.67
ATG4D-210ENST00000588972 IER5Q5VY09 327 aa10.85□□□□□ -0.67
ATG4D-210ENST00000588972 FAM177A1Q8N128 213 aaPredicted RBP10.85□□□□□ -0.67
ATG4D-210ENST00000588972 ZNF280CQ8ND82 737 aa10.85□□□□□ -0.67
ATG4D-210ENST00000588972 AIDAQ96BJ3 306 aa10.85□□□□□ -0.67
ATG4D-210ENST00000588972 SUSD3Q96L08 255 aa10.85□□□□□ -0.67
ATG4D-210ENST00000588972 SPG7Q9UQ90 795 aa10.85□□□□□ -0.67
ATG4D-210ENST00000588972 SPATA31A3Q5VYP0 1347 aa10.84□□□□□ -0.67
ATG4D-210ENST00000588972 TNS3Q68CZ2 1445 aa10.84□□□□□ -0.67
ATG4D-210ENST00000588972 IFT172Q9UG01 1749 aa10.84□□□□□ -0.67
ATG4D-210ENST00000588972 IFFO2Q5TF58 517 aa10.84□□□□□ -0.67
ATG4D-210ENST00000588972 SLC43A3Q8NBI5 491 aa10.84□□□□□ -0.67
ATG4D-210ENST00000588972 HSH2DQ96JZ2 352 aa10.84□□□□□ -0.67
ATG4D-210ENST00000588972 INSM2Q96T92 566 aaPredicted RBP10.84□□□□□ -0.67
ATG4D-210ENST00000588972 IDH3AP50213 366 aa10.83□□□□□ -0.68
ATG4D-210ENST00000588972 DEFB132Q7Z7B7 95 aa10.83□□□□□ -0.68
ATG4D-210ENST00000588972 ACBD3Q9H3P7 528 aa10.83□□□□□ -0.68
ATG4D-210ENST00000588972 CAPN10Q9HC96 672 aa10.83□□□□□ -0.68
ATG4D-210ENST00000588972 GPC6Q9Y625 555 aaPredicted RBP10.83□□□□□ -0.68
ATG4D-210ENST00000588972 ANKRD30BQ9BXX2 1392 aa10.82□□□□□ -0.68
ATG4D-210ENST00000588972 TTC24A2A3L6 582 aaPredicted RBP10.82□□□□□ -0.68
ATG4D-210ENST00000588972 SPATA31C2B4DYI2 1134 aa10.82□□□□□ -0.68
ATG4D-210ENST00000588972 EIF4BP23588 611 aaKnown RBP10.82□□□□□ -0.68
ATG4D-210ENST00000588972 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.82□□□□□ -0.68
ATG4D-210ENST00000588972 XKR5Q6UX68 686 aa10.82□□□□□ -0.68
ATG4D-210ENST00000588972 TANGO6Q9C0B7 1094 aa10.82□□□□□ -0.68
ATG4D-210ENST00000588972 FOXD3Q9UJU5 478 aaPredicted RBP10.82□□□□□ -0.68
ATG4D-210ENST00000588972 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.82□□□□□ -0.68
ATG4D-210ENST00000588972 SPATA31E1Q6ZUB1 1445 aa10.82□□□□□ -0.68
ATG4D-210ENST00000588972 ABCC11Q96J66 1382 aa10.81□□□□□ -0.68
ATG4D-210ENST00000588972 TNFRSF21O75509 655 aa10.81□□□□□ -0.68
ATG4D-210ENST00000588972 PHKA2P46019 1235 aa10.81□□□□□ -0.68
ATG4D-210ENST00000588972 VPS72Q15906 364 aa10.81□□□□□ -0.68
ATG4D-210ENST00000588972 USPL1Q5W0Q7 1092 aa10.81□□□□□ -0.68
ATG4D-210ENST00000588972 TSEN34Q9BSV6 310 aaKnown RBP10.81□□□□□ -0.68
ATG4D-210ENST00000588972 USP20Q9Y2K6 914 aa10.81□□□□□ -0.68
ATG4D-210ENST00000588972 PIK3C2GO75747 1445 aa10.81□□□□□ -0.68
ATG4D-210ENST00000588972 PLEKHH1Q9ULM0 1364 aa10.8□□□□□ -0.68
ATG4D-210ENST00000588972 SPINT1O43278 529 aa10.8□□□□□ -0.68
ATG4D-210ENST00000588972 GDF9O60383 454 aa10.8□□□□□ -0.68
ATG4D-210ENST00000588972 SMPD1P17405 629 aa10.8□□□□□ -0.68
ATG4D-210ENST00000588972 TATP17735 454 aaPredicted RBP10.8□□□□□ -0.68
ATG4D-210ENST00000588972 INPP5BP32019 993 aa10.8□□□□□ -0.68
ATG4D-210ENST00000588972 TNNI2P48788 182 aa10.8□□□□□ -0.68
ATG4D-210ENST00000588972 ARSDP51689 593 aa10.8□□□□□ -0.68
ATG4D-210ENST00000588972 TRIP4Q15650 581 aaPredicted RBP10.8□□□□□ -0.68
ATG4D-210ENST00000588972 RGL3Q3MIN7 710 aa10.8□□□□□ -0.68
ATG4D-210ENST00000588972 PI16Q6UXB8 463 aa10.8□□□□□ -0.68
ATG4D-210ENST00000588972 WAPLQ7Z5K2 1190 aa10.8□□□□□ -0.68
ATG4D-210ENST00000588972 SPNS2Q8IVW8 549 aa10.8□□□□□ -0.68
ATG4D-210ENST00000588972 CYP4X1Q8N118 509 aa10.8□□□□□ -0.68
ATG4D-210ENST00000588972 CCDC74AQ96AQ1 378 aa10.8□□□□□ -0.68
ATG4D-210ENST00000588972 RGPD1P0DJD0 1748 aa10.8□□□□□ -0.68
ATG4D-210ENST00000588972 NRAPQ86VF7 1730 aa10.8□□□□□ -0.68
ATG4D-210ENST00000588972 ADGRF5Q8IZF2 1346 aa10.8□□□□□ -0.68
ATG4D-210ENST00000588972 ARHGEF10O15013 1369 aa10.79□□□□□ -0.68
ATG4D-210ENST00000588972 YTHDC2Q9H6S0 1430 aaKnown RBP10.79□□□□□ -0.68
ATG4D-210ENST00000588972 ATP4AP20648 1035 aa10.79□□□□□ -0.68
ATG4D-210ENST00000588972 KRT27Q7Z3Y8 459 aa10.79□□□□□ -0.68
ATG4D-210ENST00000588972 EPS8L3Q8TE67 593 aaKnown RBP10.79□□□□□ -0.68
ATG4D-210ENST00000588972 SNX29Q8TEQ0 813 aa10.79□□□□□ -0.68
ATG4D-210ENST00000588972 PCGF6Q9BYE7 350 aa10.79□□□□□ -0.68
ATG4D-210ENST00000588972 OSBPL7Q9BZF2 842 aa10.79□□□□□ -0.68
ATG4D-210ENST00000588972 C12orf49Q9H741 205 aa10.79□□□□□ -0.68
ATG4D-210ENST00000588972 POLMQ9NP87 494 aaPredicted RBP10.79□□□□□ -0.68
ATG4D-210ENST00000588972 TOR4AQ9NXH8 423 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms