RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 TAF5LO75529 589 aa17.77■□□□□ 0.44
VMP1-209ENST00000588915 SOX10P56693 466 aa17.77■□□□□ 0.44
VMP1-209ENST00000588915 EXOSC9Q06265 439 aaKnown RBP17.77■□□□□ 0.44
VMP1-209ENST00000588915 CERS5Q8N5B7 392 aa17.77■□□□□ 0.44
VMP1-209ENST00000588915 ANGEL1Q9UNK9 670 aaKnown RBP17.77■□□□□ 0.44
VMP1-209ENST00000588915 PDE4DIPQ5VU43 2346 aa17.77■□□□□ 0.43
VMP1-209ENST00000588915 MANSC4A6NHS7 340 aaPredicted RBP17.76■□□□□ 0.43
VMP1-209ENST00000588915 FKTNO75072 461 aa17.76■□□□□ 0.43
VMP1-209ENST00000588915 ZBTB48P10074 688 aaPredicted RBP17.76■□□□□ 0.43
VMP1-209ENST00000588915 CCDC57Q2TAC2 916 aa17.76■□□□□ 0.43
VMP1-209ENST00000588915 SUPT20HL1Q3ZLR7 823 aa17.76■□□□□ 0.43
VMP1-209ENST00000588915 SLC10A4Q96EP9 437 aa17.76■□□□□ 0.43
VMP1-209ENST00000588915 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
VMP1-209ENST00000588915 SNAP23O00161 211 aa17.75■□□□□ 0.43
VMP1-209ENST00000588915 GRM8O00222 908 aa17.75■□□□□ 0.43
VMP1-209ENST00000588915 FBXO46Q6PJ61 603 aaPredicted RBP17.75■□□□□ 0.43
VMP1-209ENST00000588915 LMBR1LQ6UX01 489 aa17.75■□□□□ 0.43
VMP1-209ENST00000588915 LDHAL6AQ6ZMR3 332 aa17.75■□□□□ 0.43
VMP1-209ENST00000588915 HELBQ8NG08 1087 aaPredicted RBP17.75■□□□□ 0.43
VMP1-209ENST00000588915 CHMP3Q9Y3E7 222 aa17.75■□□□□ 0.43
VMP1-209ENST00000588915 TNRC18O15417 2968 aaPredicted RBP17.75■□□□□ 0.43
VMP1-209ENST00000588915 SPDYE2BA6NHP3 402 aa17.74■□□□□ 0.43
VMP1-209ENST00000588915 F6X3S4 739 aa17.74■□□□□ 0.43
VMP1-209ENST00000588915 ALDH1L1O75891 902 aa17.74■□□□□ 0.43
VMP1-209ENST00000588915 SPDYE6P0CI01 402 aa17.74■□□□□ 0.43
VMP1-209ENST00000588915 MKRN3Q13064 507 aaKnown RBP17.74■□□□□ 0.43
VMP1-209ENST00000588915 PRKG1Q13976 671 aa17.74■□□□□ 0.43
VMP1-209ENST00000588915 FAM205AQ6ZU69 1335 aa17.73■□□□□ 0.43
VMP1-209ENST00000588915 UBE4AQ14139 1066 aa17.73■□□□□ 0.43
VMP1-209ENST00000588915 CFAP100Q494V2 611 aa17.73■□□□□ 0.43
VMP1-209ENST00000588915 PRMT6Q96LA8 375 aaPredicted RBP17.73■□□□□ 0.43
VMP1-209ENST00000588915 CNNM1Q9NRU3 951 aa17.73■□□□□ 0.43
VMP1-209ENST00000588915 C9orf78Q9NZ63 289 aaPredicted RBP17.73■□□□□ 0.43
VMP1-209ENST00000588915 TAF7LQ5H9L4 462 aa17.72■□□□□ 0.43
VMP1-209ENST00000588915 EPHA10Q5JZY3 1008 aa17.72■□□□□ 0.43
VMP1-209ENST00000588915 IFNL1Q8IU54 200 aa17.72■□□□□ 0.43
VMP1-209ENST00000588915 TDRD7Q8NHU6 1098 aaKnown RBP17.72■□□□□ 0.43
VMP1-209ENST00000588915 ANP32CO43423 234 aa17.71■□□□□ 0.43
VMP1-209ENST00000588915 IREB2P48200 963 aaKnown RBP17.71■□□□□ 0.43
VMP1-209ENST00000588915 TNFAIP1Q13829 316 aa17.71■□□□□ 0.43
VMP1-209ENST00000588915 WNK4Q96J92 1243 aa17.71■□□□□ 0.43
VMP1-209ENST00000588915 PCDH10Q9P2E7 1040 aa17.71■□□□□ 0.43
VMP1-209ENST00000588915 SERPINA10Q9UK55 444 aa17.71■□□□□ 0.43
VMP1-209ENST00000588915 ECM29Q5VYK3 1845 aa17.7■□□□□ 0.42
VMP1-209ENST00000588915 F8W031 263 aaPredicted RBP17.7■□□□□ 0.42
VMP1-209ENST00000588915 OTUD7BQ6GQQ9 843 aa17.7■□□□□ 0.42
VMP1-209ENST00000588915 ZNF594Q96JF6 807 aaPredicted RBP17.7■□□□□ 0.42
VMP1-209ENST00000588915 SRCIN1Q9C0H9 1055 aa17.7■□□□□ 0.42
VMP1-209ENST00000588915 R3HDMLQ9H3Y0 253 aa17.7■□□□□ 0.42
VMP1-209ENST00000588915 SALL2Q9Y467 1007 aaPredicted RBP17.7■□□□□ 0.42
VMP1-209ENST00000588915 CLRN2A0PK11 232 aa17.69■□□□□ 0.42
VMP1-209ENST00000588915 PLIN1O60240 522 aa17.69■□□□□ 0.42
VMP1-209ENST00000588915 USP2O75604 605 aaPredicted RBP17.69■□□□□ 0.42
VMP1-209ENST00000588915 HIBADHP31937 336 aaKnown RBP17.69■□□□□ 0.42
VMP1-209ENST00000588915 RBM5P52756 815 aaKnown RBP eCLIP17.69■□□□□ 0.42
VMP1-209ENST00000588915 RASA3Q14644 834 aa17.69■□□□□ 0.42
VMP1-209ENST00000588915 NBPF12Q5TAG4 269 aaPredicted RBP17.69■□□□□ 0.42
VMP1-209ENST00000588915 PRPF38BQ5VTL8 546 aaKnown RBP17.69■□□□□ 0.42
VMP1-209ENST00000588915 ANKRD13AQ8IZ07 590 aa17.69■□□□□ 0.42
VMP1-209ENST00000588915 VEZTQ9HBM0 779 aa17.69■□□□□ 0.42
VMP1-209ENST00000588915 FZD1Q9UP38 647 aa17.69■□□□□ 0.42
VMP1-209ENST00000588915 PCDHAC2Q9Y5I4 1007 aa17.69■□□□□ 0.42
VMP1-209ENST00000588915 SSC5DA1L4H1 1573 aa17.69■□□□□ 0.42
VMP1-209ENST00000588915 TESPA1A2RU30 521 aaPredicted RBP17.68■□□□□ 0.42
VMP1-209ENST00000588915 SPDYE2Q495Y8 402 aa17.68■□□□□ 0.42
VMP1-209ENST00000588915 MFSD14BQ5SR56 506 aa17.68■□□□□ 0.42
VMP1-209ENST00000588915 CLMNQ96JQ2 1002 aa17.68■□□□□ 0.42
VMP1-209ENST00000588915 FAM84BQ96KN1 310 aaPredicted RBP17.68■□□□□ 0.42
VMP1-209ENST00000588915 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
VMP1-209ENST00000588915 A0A1B0GUL6 1792 aa17.68■□□□□ 0.42
VMP1-209ENST00000588915 INTS3Q68E01 1043 aaKnown RBP17.67■□□□□ 0.42
VMP1-209ENST00000588915 RIPOR2Q9Y4F9 1068 aa17.67■□□□□ 0.42
VMP1-209ENST00000588915 UTYO14607 1347 aa17.67■□□□□ 0.42
VMP1-209ENST00000588915 MROH5Q6ZUA9 1318 aa17.67■□□□□ 0.42
VMP1-209ENST00000588915 LAMB1P07942 1786 aa17.66■□□□□ 0.42
VMP1-209ENST00000588915 IGF2BP3O00425 579 aaKnown RBP eCLIP17.66■□□□□ 0.42
VMP1-209ENST00000588915 HDLBPQ00341 1268 aaKnown RBP17.66■□□□□ 0.42
VMP1-209ENST00000588915 ZNF70Q9UC06 446 aaPredicted RBP17.66■□□□□ 0.42
VMP1-209ENST00000588915 TTF2Q9UNY4 1162 aaKnown RBP17.66■□□□□ 0.42
VMP1-209ENST00000588915 TNNI2P48788 182 aa17.65■□□□□ 0.42
VMP1-209ENST00000588915 SLC4A10Q6U841 1118 aa17.65■□□□□ 0.42
VMP1-209ENST00000588915 FBXO33Q7Z6M2 555 aa17.65■□□□□ 0.42
VMP1-209ENST00000588915 DZIP1LQ8IYY4 767 aaKnown RBP17.65■□□□□ 0.42
VMP1-209ENST00000588915 ERO1AQ96HE7 468 aa17.65■□□□□ 0.42
VMP1-209ENST00000588915 KAZALD1Q96I82 304 aa17.65■□□□□ 0.42
VMP1-209ENST00000588915 MRIQ9BWK5 157 aa17.65■□□□□ 0.42
VMP1-209ENST00000588915 JAG2Q9Y219 1238 aa17.65■□□□□ 0.42
VMP1-209ENST00000588915 TRIM17Q9Y577 477 aa17.65■□□□□ 0.42
VMP1-209ENST00000588915 GYG1P46976 350 aa17.64■□□□□ 0.41
VMP1-209ENST00000588915 RABL6Q3YEC7 729 aaPredicted RBP17.64■□□□□ 0.41
VMP1-209ENST00000588915 OTOP1Q7RTM1 612 aa17.64■□□□□ 0.41
VMP1-209ENST00000588915 TBC1D22AQ8WUA7 517 aa17.64■□□□□ 0.41
VMP1-209ENST00000588915 SUCLG2Q96I99 432 aa17.64■□□□□ 0.41
VMP1-209ENST00000588915 AOX1Q06278 1338 aa17.64■□□□□ 0.41
VMP1-209ENST00000588915 NBPF7P0C2Y1 421 aaPredicted RBP17.63■□□□□ 0.41
VMP1-209ENST00000588915 GJA5P36382 358 aa17.63■□□□□ 0.41
VMP1-209ENST00000588915 CRKP46108 304 aa17.63■□□□□ 0.41
VMP1-209ENST00000588915 TEPSINQ96N21 525 aa17.63■□□□□ 0.41
VMP1-209ENST00000588915 PUS3Q9BZE2 481 aaKnown RBP17.63■□□□□ 0.41
VMP1-209ENST00000588915 TDRD3Q9H7E2 651 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms