RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 SGSM2O43147 1006 aa8.8□□□□□ -1
ZNF554-202ENST00000588534 PPIP5K2O43314 1243 aa8.8□□□□□ -1
ZNF554-202ENST00000588534 KIF5BP33176 963 aa8.8□□□□□ -1
ZNF554-202ENST00000588534 CTCFLQ8NI51 663 aaPredicted RBP8.8□□□□□ -1
ZNF554-202ENST00000588534 COA1Q9GZY4 146 aa8.8□□□□□ -1
ZNF554-202ENST00000588534 PIM2Q9P1W9 311 aa8.8□□□□□ -1
ZNF554-202ENST00000588534 WDR33Q9C0J8 1336 aaKnown RBP8.79□□□□□ -1
ZNF554-202ENST00000588534 NTSR2O95665 410 aa8.79□□□□□ -1
ZNF554-202ENST00000588534 IKQ13123 557 aaPredicted RBP8.79□□□□□ -1
ZNF554-202ENST00000588534 CATIPQ7Z7H3 387 aa8.79□□□□□ -1
ZNF554-202ENST00000588534 SP8Q8IXZ3 490 aa8.79□□□□□ -1
ZNF554-202ENST00000588534 DSCC1Q9BVC3 393 aa8.79□□□□□ -1
ZNF554-202ENST00000588534 IQSEC3Q9UPP2 1182 aaPredicted RBP8.79□□□□□ -1
ZNF554-202ENST00000588534 GNAQP50148 359 aa8.79□□□□□ -1
ZNF554-202ENST00000588534 TNIP1Q15025 636 aa8.79□□□□□ -1
ZNF554-202ENST00000588534 DALRD3Q5D0E6 543 aaKnown RBP8.79□□□□□ -1
ZNF554-202ENST00000588534 FOXD4L1Q9NU39 408 aa8.79□□□□□ -1
ZNF554-202ENST00000588534 IFIT3O14879 490 aaKnown RBP8.79□□□□□ -1
ZNF554-202ENST00000588534 RANBP6O60518 1105 aaKnown RBP8.79□□□□□ -1
ZNF554-202ENST00000588534 WDHD1O75717 1129 aaPredicted RBP8.79□□□□□ -1
ZNF554-202ENST00000588534 PCP11498 1178 aaKnown RBP8.79□□□□□ -1
ZNF554-202ENST00000588534 ZAP70P43403 619 aa8.79□□□□□ -1
ZNF554-202ENST00000588534 DBNLQ9UJU6 430 aaKnown RBP8.79□□□□□ -1
ZNF554-202ENST00000588534 TRPM3Q9HCF6 1732 aaPredicted RBP8.79□□□□□ -1
ZNF554-202ENST00000588534 BCL9LQ86UU0 1499 aa8.79□□□□□ -1
ZNF554-202ENST00000588534 RFX7Q2KHR2 1363 aa8.79□□□□□ -1
ZNF554-202ENST00000588534 VPS37CA5D8V6 355 aaPredicted RBP8.78□□□□□ -1
ZNF554-202ENST00000588534 CCDC24Q8N4L8 307 aa8.78□□□□□ -1
ZNF554-202ENST00000588534 ZNF396Q96N95 335 aaPredicted RBP8.78□□□□□ -1
ZNF554-202ENST00000588534 PUS3Q9BZE2 481 aaKnown RBP8.78□□□□□ -1
ZNF554-202ENST00000588534 SEC31BQ9NQW1 1179 aa8.78□□□□□ -1
ZNF554-202ENST00000588534 RBM27Q9P2N5 1060 aaKnown RBP8.78□□□□□ -1
ZNF554-202ENST00000588534 SLC12A7Q9Y666 1083 aa8.78□□□□□ -1
ZNF554-202ENST00000588534 NHSL1Q5SYE7 1610 aa8.78□□□□□ -1
ZNF554-202ENST00000588534 SASH1O94885 1247 aa8.78□□□□□ -1
ZNF554-202ENST00000588534 CALM1P0DP23 149 aa8.78□□□□□ -1
ZNF554-202ENST00000588534 CALM2P0DP24 149 aa8.78□□□□□ -1
ZNF554-202ENST00000588534 CALM3P0DP25 149 aa8.78□□□□□ -1
ZNF554-202ENST00000588534 C8orf34Q49A92 452 aa8.78□□□□□ -1
ZNF554-202ENST00000588534 EPHA10Q5JZY3 1008 aa8.78□□□□□ -1
ZNF554-202ENST00000588534 STYK1Q6J9G0 422 aa8.78□□□□□ -1
ZNF554-202ENST00000588534 SPON1Q9HCB6 807 aa8.78□□□□□ -1
ZNF554-202ENST00000588534 RPAP1Q9BWH6 1393 aaPredicted RBP8.78□□□□□ -1
ZNF554-202ENST00000588534 PHRF1Q9P1Y6 1649 aaKnown RBP8.78□□□□□ -1
ZNF554-202ENST00000588534 TSPY2A6NKD2 308 aa8.78□□□□□ -1
ZNF554-202ENST00000588534 NF2P35240 595 aa8.78□□□□□ -1
ZNF554-202ENST00000588534 PRR5LQ6MZQ0 368 aa8.78□□□□□ -1
ZNF554-202ENST00000588534 HOOK1Q9UJC3 728 aaKnown RBP8.78□□□□□ -1
ZNF554-202ENST00000588534 TEX11Q8IYF3 940 aa8.77□□□□□ -1
ZNF554-202ENST00000588534 JMYQ8N9B5 988 aa8.77□□□□□ -1
ZNF554-202ENST00000588534 OTUD7AQ8TE49 926 aaPredicted RBP8.77□□□□□ -1
ZNF554-202ENST00000588534 SNX21Q969T3 373 aa8.77□□□□□ -1
ZNF554-202ENST00000588534 TEKT1Q969V4 418 aa8.77□□□□□ -1
ZNF554-202ENST00000588534 MINPP1Q9UNW1 487 aa8.77□□□□□ -1
ZNF554-202ENST00000588534 MBD4O95243 580 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 ATP2B2Q01814 1243 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 SAMD1Q6SPF0 538 aaPredicted RBP8.77□□□□□ -1.01
ZNF554-202ENST00000588534 RASSF8Q8NHQ8 419 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 NUP133Q8WUM0 1156 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 BCS1LQ9Y276 419 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 TNFAIP1Q13829 316 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 TMEM67Q5HYA8 995 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 MFSD14BQ5SR56 506 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 PODNQ7Z5L7 613 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 USP26Q9BXU7 913 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 MYO3BQ8WXR4 1341 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 GOLGA6L6A8MZA4 724 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 GPAA1O43292 621 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 GYS1P13807 737 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 RBM25P49756 843 aaKnown RBP8.77□□□□□ -1.01
ZNF554-202ENST00000588534 CREB3L3Q68CJ9 461 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 ZNF512BQ96KM6 892 aaPredicted RBP8.77□□□□□ -1.01
ZNF554-202ENST00000588534 TM6SF1Q9BZW5 370 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 MCM9Q9NXL9 1143 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 SUGT1Q9Y2Z0 365 aa8.77□□□□□ -1.01
ZNF554-202ENST00000588534 MRC1P22897 1456 aa8.76□□□□□ -1.01
ZNF554-202ENST00000588534 MPHOSPH10O00566 681 aaKnown RBP8.76□□□□□ -1.01
ZNF554-202ENST00000588534 BCAMP50895 628 aa8.76□□□□□ -1.01
ZNF554-202ENST00000588534 PPP2R5BQ15173 497 aa8.76□□□□□ -1.01
ZNF554-202ENST00000588534 EZH2Q15910 746 aaKnown RBP8.76□□□□□ -1.01
ZNF554-202ENST00000588534 TTLL5Q6EMB2 1281 aa8.76□□□□□ -1.01
ZNF554-202ENST00000588534 DHX32Q7L7V1 743 aaKnown RBP8.76□□□□□ -1.01
ZNF554-202ENST00000588534 CCDC12Q8WUD4 166 aaPredicted RBP8.76□□□□□ -1.01
ZNF554-202ENST00000588534 KAT14Q9H8E8 782 aa8.76□□□□□ -1.01
ZNF554-202ENST00000588534 TCEAL9Q9UHQ7 104 aa8.76□□□□□ -1.01
ZNF554-202ENST00000588534 NOL7Q9UMY1 257 aaKnown RBP8.76□□□□□ -1.01
ZNF554-202ENST00000588534 RIPOR2Q9Y4F9 1068 aa8.76□□□□□ -1.01
ZNF554-202ENST00000588534 PATL2C9JE40 543 aaKnown RBP8.76□□□□□ -1.01
ZNF554-202ENST00000588534 H7C1D1 291 aa8.76□□□□□ -1.01
ZNF554-202ENST00000588534 DEKP35659 375 aaKnown RBP8.76□□□□□ -1.01
ZNF554-202ENST00000588534 GYG1P46976 350 aa8.76□□□□□ -1.01
ZNF554-202ENST00000588534 WTAPQ15007 396 aa8.76□□□□□ -1.01
ZNF554-202ENST00000588534 LARP1BQ659C4 914 aaKnown RBP8.76□□□□□ -1.01
ZNF554-202ENST00000588534 DPY19L2Q6NUT2 758 aa8.76□□□□□ -1.01
ZNF554-202ENST00000588534 TMEM87BQ96K49 555 aa8.76□□□□□ -1.01
ZNF554-202ENST00000588534 ARPP21Q9UBL0 812 aaPredicted RBP8.76□□□□□ -1.01
ZNF554-202ENST00000588534 ZNF532Q9HCE3 1301 aa8.76□□□□□ -1.01
ZNF554-202ENST00000588534 PDE6AP16499 860 aa8.76□□□□□ -1.01
ZNF554-202ENST00000588534 PHKA1P46020 1223 aa8.76□□□□□ -1.01
ZNF554-202ENST00000588534 GTF2IP78347 998 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms