RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 FKBP1BP68106 108 aa27.29■■□□□ 1.96
CIRBP-219ENST00000588411 RGMBQ6NW40 437 aa27.29■■□□□ 1.96
CIRBP-219ENST00000588411 APOBEC3FQ8IUX4 373 aaKnown RBP27.29■■□□□ 1.96
CIRBP-219ENST00000588411 ZNF646O15015 1829 aaPredicted RBP27.28■■□□□ 1.96
CIRBP-219ENST00000588411 IPO8O15397 1037 aaKnown RBP27.28■■□□□ 1.96
CIRBP-219ENST00000588411 DLGAP5Q15398 846 aa27.28■■□□□ 1.96
CIRBP-219ENST00000588411 LRRC24Q50LG9 513 aa27.28■■□□□ 1.96
CIRBP-219ENST00000588411 CERS5Q8N5B7 392 aa27.28■■□□□ 1.96
CIRBP-219ENST00000588411 CCDC102AQ96A19 550 aa27.28■■□□□ 1.96
CIRBP-219ENST00000588411 GYG1P46976 350 aa27.27■■□□□ 1.96
CIRBP-219ENST00000588411 HNRNPUQ00839 825 aaKnown RBP eCLIP27.27■■□□□ 1.96
CIRBP-219ENST00000588411 CAVIN4Q5BKX8 364 aa27.27■■□□□ 1.96
CIRBP-219ENST00000588411 TDRD7Q8NHU6 1098 aaKnown RBP27.27■■□□□ 1.96
CIRBP-219ENST00000588411 FAM205AQ6ZU69 1335 aa27.26■■□□□ 1.95
CIRBP-219ENST00000588411 PDE8BO95263 885 aa27.26■■□□□ 1.95
CIRBP-219ENST00000588411 NF2P35240 595 aa27.26■■□□□ 1.95
CIRBP-219ENST00000588411 ZNF157P51786 506 aaPredicted RBP27.26■■□□□ 1.95
CIRBP-219ENST00000588411 KLHDC4Q8TBB5 520 aa27.26■■□□□ 1.95
CIRBP-219ENST00000588411 FAM84BQ96KN1 310 aaPredicted RBP27.26■■□□□ 1.95
CIRBP-219ENST00000588411 F8W031 263 aaPredicted RBP27.25■■□□□ 1.95
CIRBP-219ENST00000588411 CA12O43570 354 aa27.25■■□□□ 1.95
CIRBP-219ENST00000588411 MYO1BO43795 1136 aa27.25■■□□□ 1.95
CIRBP-219ENST00000588411 LBX1P52954 281 aa27.25■■□□□ 1.95
CIRBP-219ENST00000588411 MTMR14Q8NCE2 650 aa27.25■■□□□ 1.95
CIRBP-219ENST00000588411 JAG2Q9Y219 1238 aa27.25■■□□□ 1.95
CIRBP-219ENST00000588411 EYA2O00167 538 aa27.24■■□□□ 1.95
CIRBP-219ENST00000588411 HSPA8P11142 646 aaKnown RBP27.24■■□□□ 1.95
CIRBP-219ENST00000588411 PUM3Q15397 648 aaKnown RBP27.24■■□□□ 1.95
CIRBP-219ENST00000588411 ZBED3Q96IU2 234 aaPredicted RBP27.24■■□□□ 1.95
CIRBP-219ENST00000588411 FRAT2O75474 233 aaPredicted RBP27.23■■□□□ 1.95
CIRBP-219ENST00000588411 IFIT1P09914 478 aaKnown RBP27.23■■□□□ 1.95
CIRBP-219ENST00000588411 MFSD14BQ5SR56 506 aa27.23■■□□□ 1.95
CIRBP-219ENST00000588411 VGLL2Q8N8G2 317 aa27.23■■□□□ 1.95
CIRBP-219ENST00000588411 FBXO3Q9UK99 471 aa27.23■■□□□ 1.95
CIRBP-219ENST00000588411 SCAF8Q9UPN6 1271 aaKnown RBP27.23■■□□□ 1.95
CIRBP-219ENST00000588411 RFX5P48382 616 aaPredicted RBP27.22■■□□□ 1.95
CIRBP-219ENST00000588411 CFAP100Q494V2 611 aa27.22■■□□□ 1.95
CIRBP-219ENST00000588411 INTS3Q68E01 1043 aaKnown RBP27.22■■□□□ 1.95
CIRBP-219ENST00000588411 FBXO33Q7Z6M2 555 aa27.22■■□□□ 1.95
CIRBP-219ENST00000588411 GNAI3P08754 354 aa27.21■■□□□ 1.95
CIRBP-219ENST00000588411 RBM5P52756 815 aaKnown RBP eCLIP27.21■■□□□ 1.95
CIRBP-219ENST00000588411 PTPN12Q05209 780 aaKnown RBP27.21■■□□□ 1.95
CIRBP-219ENST00000588411 TTLL12Q14166 644 aaPredicted RBP27.21■■□□□ 1.95
CIRBP-219ENST00000588411 LRRFIP2Q9Y608 721 aaKnown RBP27.21■■□□□ 1.95
CIRBP-219ENST00000588411 PAPPA2Q9BXP8 1791 aa27.21■■□□□ 1.95
CIRBP-219ENST00000588411 TBC1D22AQ8WUA7 517 aa27.2■■□□□ 1.94
CIRBP-219ENST00000588411 COL1A1P02452 1464 aaPredicted RBP27.19■■□□□ 1.94
CIRBP-219ENST00000588411 SPDYE2BA6NHP3 402 aa27.19■■□□□ 1.94
CIRBP-219ENST00000588411 FAM155AB1AL88 458 aaPredicted RBP27.19■■□□□ 1.94
CIRBP-219ENST00000588411 SPDYE6P0CI01 402 aa27.19■■□□□ 1.94
CIRBP-219ENST00000588411 SLC5A1P13866 664 aa27.19■■□□□ 1.94
CIRBP-219ENST00000588411 PRAMEF18Q5VWM3 479 aa27.19■■□□□ 1.94
CIRBP-219ENST00000588411 FRAT1Q92837 279 aaPredicted RBP27.19■■□□□ 1.94
CIRBP-219ENST00000588411 MEIS3Q99687 375 aa27.19■■□□□ 1.94
CIRBP-219ENST00000588411 CIAO1O76071 339 aa27.18■■□□□ 1.94
CIRBP-219ENST00000588411 SLC10A3P09131 477 aa27.18■■□□□ 1.94
CIRBP-219ENST00000588411 ATF7IPQ6VMQ6 1270 aa27.18■■□□□ 1.94
CIRBP-219ENST00000588411 TTF2Q9UNY4 1162 aaKnown RBP27.18■■□□□ 1.94
CIRBP-219ENST00000588411 PPP2R3BQ9Y5P8 575 aa27.18■■□□□ 1.94
CIRBP-219ENST00000588411 CHAF1AQ13111 956 aaPredicted RBP27.17■■□□□ 1.94
CIRBP-219ENST00000588411 LPIN2Q92539 896 aa27.17■■□□□ 1.94
CIRBP-219ENST00000588411 SIL1Q9H173 461 aa27.17■■□□□ 1.94
CIRBP-219ENST00000588411 SERPINA10Q9UK55 444 aa27.17■■□□□ 1.94
CIRBP-219ENST00000588411 BCAR3O75815 825 aa27.16■■□□□ 1.94
CIRBP-219ENST00000588411 TRIM27P14373 513 aa27.16■■□□□ 1.94
CIRBP-219ENST00000588411 FGFR2P21802 821 aa27.16■■□□□ 1.94
CIRBP-219ENST00000588411 ARMC9Q7Z3E5 817 aa27.16■■□□□ 1.94
CIRBP-219ENST00000588411 REM2Q8IYK8 340 aaPredicted RBP27.16■■□□□ 1.94
CIRBP-219ENST00000588411 DEFB129Q9H1M3 183 aa27.16■■□□□ 1.94
CIRBP-219ENST00000588411 CEP126Q9P2H0 1117 aa27.16■■□□□ 1.94
CIRBP-219ENST00000588411 IQSEC3Q9UPP2 1182 aaPredicted RBP27.16■■□□□ 1.94
CIRBP-219ENST00000588411 BCAMP50895 628 aa27.15■■□□□ 1.94
CIRBP-219ENST00000588411 KIF23Q02241 960 aaPredicted RBP27.15■■□□□ 1.94
CIRBP-219ENST00000588411 VEZTQ9HBM0 779 aa27.15■■□□□ 1.94
CIRBP-219ENST00000588411 CLRN2A0PK11 232 aa27.14■■□□□ 1.94
CIRBP-219ENST00000588411 UBE2Q2LH0YL09 131 aa27.14■■□□□ 1.94
CIRBP-219ENST00000588411 IL15P40933 162 aaPredicted RBP27.14■■□□□ 1.94
CIRBP-219ENST00000588411 ATG9AQ7Z3C6 839 aa27.14■■□□□ 1.94
CIRBP-219ENST00000588411 RASAL3Q86YV0 1011 aa27.14■■□□□ 1.94
CIRBP-219ENST00000588411 PRMT6Q96LA8 375 aaPredicted RBP27.14■■□□□ 1.94
CIRBP-219ENST00000588411 ZIC5Q96T25 663 aa27.14■■□□□ 1.94
CIRBP-219ENST00000588411 TNFAIP1Q13829 316 aa27.13■■□□□ 1.93
CIRBP-219ENST00000588411 ZKSCAN2Q63HK3 967 aa27.13■■□□□ 1.93
CIRBP-219ENST00000588411 PCDHAC2Q9Y5I4 1007 aa27.13■■□□□ 1.93
CIRBP-219ENST00000588411 ATP2B3Q16720 1220 aa27.12■■□□□ 1.93
CIRBP-219ENST00000588411 MOB2Q70IA6 237 aa27.12■■□□□ 1.93
CIRBP-219ENST00000588411 COPRSQ9NQ92 184 aa27.12■■□□□ 1.93
CIRBP-219ENST00000588411 TSKSQ9UJT2 592 aa27.12■■□□□ 1.93
CIRBP-219ENST00000588411 SUGT1Q9Y2Z0 365 aa27.12■■□□□ 1.93
CIRBP-219ENST00000588411 SUPT20HL1Q3ZLR7 823 aa27.11■■□□□ 1.93
CIRBP-219ENST00000588411 GNL3LQ9NVN8 582 aaKnown RBP27.11■■□□□ 1.93
CIRBP-219ENST00000588411 MAST3O60307 1309 aa27.11■■□□□ 1.93
CIRBP-219ENST00000588411 ZBED9Q6R2W3 1325 aa27.11■■□□□ 1.93
CIRBP-219ENST00000588411 SRGAP3O43295 1099 aa27.1■■□□□ 1.93
CIRBP-219ENST00000588411 PPP1R12BO60237 982 aaPredicted RBP27.1■■□□□ 1.93
CIRBP-219ENST00000588411 CRKP46108 304 aa27.1■■□□□ 1.93
CIRBP-219ENST00000588411 HDLBPQ00341 1268 aaKnown RBP27.1■■□□□ 1.93
CIRBP-219ENST00000588411 DZIP1LQ8IYY4 767 aaKnown RBP27.1■■□□□ 1.93
CIRBP-219ENST00000588411 CLUAP1Q96AJ1 413 aa27.1■■□□□ 1.93
CIRBP-219ENST00000588411 SAGE1Q9NXZ1 904 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms