RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 CIAPIN1Q6FI81 312 aa13.12□□□□□ -0.31
SMARCA4-213ENST00000587988 PI16Q6UXB8 463 aa13.12□□□□□ -0.31
SMARCA4-213ENST00000587988 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
SMARCA4-213ENST00000587988 GNL3LQ9NVN8 582 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-213ENST00000587988 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-213ENST00000587988 SALL3Q9BXA9 1300 aa13.12□□□□□ -0.31
SMARCA4-213ENST00000587988 MYH13Q9UKX3 1938 aa13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 DDNO94850 711 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 VIL1P09327 827 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 UQCRFS1P1P0C7P4 283 aa13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 PDE4AP27815 886 aa13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 DACT2Q5SW24 774 aa13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 STRIP1Q5VSL9 837 aa13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 SKAP1Q86WV1 359 aa13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 ZNF512BQ96KM6 892 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 SNRKQ9NRH2 765 aa13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 HMG20BQ9P0W2 317 aa13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 ZBTB12Q9Y330 459 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 GJA3Q9Y6H8 435 aa13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 NDUFB9Q9Y6M9 179 aa13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 AKAP11Q9UKA4 1901 aa13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 FAM205AQ6ZU69 1335 aa13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 ZC3H4Q9UPT8 1303 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-213ENST00000587988 ZBTB22O15209 634 aa13.1□□□□□ -0.31
SMARCA4-213ENST00000587988 CERS5Q8N5B7 392 aa13.1□□□□□ -0.31
SMARCA4-213ENST00000587988 DENND2AQ9ULE3 1009 aa13.1□□□□□ -0.31
SMARCA4-213ENST00000587988 GLTPD2A6NH11 291 aa13.09□□□□□ -0.31
SMARCA4-213ENST00000587988 SEMA3EO15041 775 aa13.09□□□□□ -0.31
SMARCA4-213ENST00000587988 ATP5JP18859 108 aa13.09□□□□□ -0.31
SMARCA4-213ENST00000587988 MX1P20591 662 aa13.09□□□□□ -0.31
SMARCA4-213ENST00000587988 ZAP70P43403 619 aa13.09□□□□□ -0.31
SMARCA4-213ENST00000587988 TNIP1Q15025 636 aa13.09□□□□□ -0.31
SMARCA4-213ENST00000587988 GRIK5Q16478 980 aa13.09□□□□□ -0.31
SMARCA4-213ENST00000587988 DPY19L2Q6NUT2 758 aa13.09□□□□□ -0.31
SMARCA4-213ENST00000587988 RSBN1LQ6PCB5 846 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-213ENST00000587988 PLEKHM2Q8IWE5 1019 aa13.09□□□□□ -0.31
SMARCA4-213ENST00000587988 SPATA5Q8NB90 893 aa13.09□□□□□ -0.31
SMARCA4-213ENST00000587988 BOLA2Q9H3K6 86 aa13.09□□□□□ -0.31
SMARCA4-213ENST00000587988 ECHDC1Q9NTX5 307 aa13.09□□□□□ -0.31
SMARCA4-213ENST00000587988 SHTN1A0MZ66 631 aa13.08□□□□□ -0.32
SMARCA4-213ENST00000587988 CYP2E1P05181 493 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-213ENST00000587988 GMPSP49915 693 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-213ENST00000587988 PDE1AP54750 535 aa13.08□□□□□ -0.32
SMARCA4-213ENST00000587988 MFSD14BQ5SR56 506 aa13.08□□□□□ -0.32
SMARCA4-213ENST00000587988 TBC1D9Q6ZT07 1266 aa13.08□□□□□ -0.32
SMARCA4-213ENST00000587988 GPC2Q8N158 579 aa13.08□□□□□ -0.32
SMARCA4-213ENST00000587988 PI4K2BQ8TCG2 481 aa13.08□□□□□ -0.32
SMARCA4-213ENST00000587988 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMARCA4-213ENST00000587988 GMLQ99445 158 aa13.08□□□□□ -0.32
SMARCA4-213ENST00000587988 STAP2Q9UGK3 403 aa13.08□□□□□ -0.32
SMARCA4-213ENST00000587988 GTF3C3Q9Y5Q9 886 aa13.08□□□□□ -0.32
SMARCA4-213ENST00000587988 TTC41PQ6P2S7 1318 aa13.08□□□□□ -0.32
SMARCA4-213ENST00000587988 SCNN1DP51172 638 aa13.07□□□□□ -0.32
SMARCA4-213ENST00000587988 FKBP1AP62942 108 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-213ENST00000587988 WDR66Q8TBY9 1149 aa13.07□□□□□ -0.32
SMARCA4-213ENST00000587988 EDC3Q96F86 508 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-213ENST00000587988 DNAJC2Q99543 621 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-213ENST00000587988 ANTXR1Q9H6X2 564 aa13.07□□□□□ -0.32
SMARCA4-213ENST00000587988 PDS5AQ29RF7 1337 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-213ENST00000587988 MYO5AQ9Y4I1 1855 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-213ENST00000587988 POTECB2RU33 542 aa13.06□□□□□ -0.32
SMARCA4-213ENST00000587988 F8W031 263 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-213ENST00000587988 PRDX5P30044 214 aa13.06□□□□□ -0.32
SMARCA4-213ENST00000587988 KIAA0825Q8IV33 1275 aa13.06□□□□□ -0.32
SMARCA4-213ENST00000587988 AGBL3Q8NEM8 1001 aa13.06□□□□□ -0.32
SMARCA4-213ENST00000587988 ZNF526Q8TF50 670 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-213ENST00000587988 GPATCH3Q96I76 525 aa13.06□□□□□ -0.32
SMARCA4-213ENST00000587988 HAUS7Q99871 368 aa13.06□□□□□ -0.32
SMARCA4-213ENST00000587988 PIH1D3Q9NQM4 214 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-213ENST00000587988 SALL1Q9NSC2 1324 aa13.06□□□□□ -0.32
SMARCA4-213ENST00000587988 WDR90Q96KV7 1748 aa13.05□□□□□ -0.32
SMARCA4-213ENST00000587988 MAP4K4O95819 1239 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-213ENST00000587988 EPS15P42566 896 aa13.05□□□□□ -0.32
SMARCA4-213ENST00000587988 TBC1D22AQ8WUA7 517 aa13.05□□□□□ -0.32
SMARCA4-213ENST00000587988 DPF2Q92785 391 aa13.05□□□□□ -0.32
SMARCA4-213ENST00000587988 L3MBTL3Q96JM7 780 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-213ENST00000587988 ABCF2Q9UG63 623 aa13.05□□□□□ -0.32
SMARCA4-213ENST00000587988 CNOT7Q9UIV1 285 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-213ENST00000587988 MYO3BQ8WXR4 1341 aa13.05□□□□□ -0.32
SMARCA4-213ENST00000587988 GOLIM4O00461 696 aa13.04□□□□□ -0.32
SMARCA4-213ENST00000587988 ERC2O15083 957 aa13.04□□□□□ -0.32
SMARCA4-213ENST00000587988 GLRX3O76003 335 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-213ENST00000587988 RPS12P25398 132 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-213ENST00000587988 YY1P25490 414 aa13.04□□□□□ -0.32
SMARCA4-213ENST00000587988 MICALL2Q8IY33 904 aa13.04□□□□□ -0.32
SMARCA4-213ENST00000587988 OSBPL3Q9H4L5 887 aa13.04□□□□□ -0.32
SMARCA4-213ENST00000587988 RRAGCQ9HB90 399 aa13.04□□□□□ -0.32
SMARCA4-213ENST00000587988 PAG1Q9NWQ8 432 aa13.04□□□□□ -0.32
SMARCA4-213ENST00000587988 GPRC5DQ9NZD1 345 aa13.04□□□□□ -0.32
SMARCA4-213ENST00000587988 LDHBP07195 334 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-213ENST00000587988 USP17L8P0C7I0 530 aa13.03□□□□□ -0.32
SMARCA4-213ENST00000587988 ERICH6Q7L0X2 663 aa13.03□□□□□ -0.32
SMARCA4-213ENST00000587988 SAMD7Q7Z3H4 446 aa13.03□□□□□ -0.32
SMARCA4-213ENST00000587988 ZGPATQ8N5A5 531 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-213ENST00000587988 ZNF384Q8TF68 577 aa13.03□□□□□ -0.32
SMARCA4-213ENST00000587988 NMRK2Q9NPI5 230 aa13.03□□□□□ -0.32
SMARCA4-213ENST00000587988 TTF2Q9UNY4 1162 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-213ENST00000587988 PCDHAC2Q9Y5I4 1007 aa13.03□□□□□ -0.32
SMARCA4-213ENST00000587988 AOX1Q06278 1338 aa13.03□□□□□ -0.32
SMARCA4-213ENST00000587988 ADAMTSL1Q8N6G6 1762 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms