RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 C9orf78Q9NZ63 289 aaPredicted RBP17.96■□□□□ 0.47
ERCC1-205ENST00000587888 ANGEL1Q9UNK9 670 aaKnown RBP17.96■□□□□ 0.47
ERCC1-205ENST00000587888 PCDHAC2Q9Y5I4 1007 aa17.96■□□□□ 0.47
ERCC1-205ENST00000587888 CACNA1FO60840 1977 aa17.96■□□□□ 0.47
ERCC1-205ENST00000587888 IRS2Q9Y4H2 1338 aa17.96■□□□□ 0.46
ERCC1-205ENST00000587888 ZNF316A6NFI3 1004 aaPredicted RBP17.95■□□□□ 0.46
ERCC1-205ENST00000587888 GRM8O00222 908 aa17.95■□□□□ 0.46
ERCC1-205ENST00000587888 TM4SF4P48230 202 aa17.95■□□□□ 0.46
ERCC1-205ENST00000587888 C15orf52Q6ZUT6 534 aaKnown RBP17.95■□□□□ 0.46
ERCC1-205ENST00000587888 DEFB129Q9H1M3 183 aa17.95■□□□□ 0.46
ERCC1-205ENST00000587888 CNNM1Q9NRU3 951 aa17.95■□□□□ 0.46
ERCC1-205ENST00000587888 IL1R1P14778 569 aa17.94■□□□□ 0.46
ERCC1-205ENST00000587888 SOX10P56693 466 aa17.94■□□□□ 0.46
ERCC1-205ENST00000587888 CLRN2A0PK11 232 aa17.93■□□□□ 0.46
ERCC1-205ENST00000587888 RBM5P52756 815 aaKnown RBP eCLIP17.93■□□□□ 0.46
ERCC1-205ENST00000587888 CFAP100Q494V2 611 aa17.93■□□□□ 0.46
ERCC1-205ENST00000587888 ZNF296Q8WUU4 475 aaPredicted RBP17.93■□□□□ 0.46
ERCC1-205ENST00000587888 SLC10A4Q96EP9 437 aa17.93■□□□□ 0.46
ERCC1-205ENST00000587888 MYO1BO43795 1136 aa17.92■□□□□ 0.46
ERCC1-205ENST00000587888 SREBF2Q12772 1141 aa17.92■□□□□ 0.46
ERCC1-205ENST00000587888 LDLRAD1Q5T700 205 aa17.92■□□□□ 0.46
ERCC1-205ENST00000587888 PRMT6Q96LA8 375 aaPredicted RBP17.92■□□□□ 0.46
ERCC1-205ENST00000587888 SRCIN1Q9C0H9 1055 aa17.92■□□□□ 0.46
ERCC1-205ENST00000587888 GPR25O00155 361 aa17.91■□□□□ 0.46
ERCC1-205ENST00000587888 ALDH1L1O75891 902 aa17.91■□□□□ 0.46
ERCC1-205ENST00000587888 ZEB1P37275 1124 aaPredicted RBP17.91■□□□□ 0.46
ERCC1-205ENST00000587888 SPRYD7Q5W111 196 aa17.91■□□□□ 0.46
ERCC1-205ENST00000587888 MTMR14Q8NCE2 650 aa17.91■□□□□ 0.46
ERCC1-205ENST00000587888 PUS3Q9BZE2 481 aaKnown RBP17.91■□□□□ 0.46
ERCC1-205ENST00000587888 VEZTQ9HBM0 779 aa17.91■□□□□ 0.46
ERCC1-205ENST00000587888 GYG1P46976 350 aa17.9■□□□□ 0.46
ERCC1-205ENST00000587888 FKBP1AP62942 108 aaKnown RBP17.9■□□□□ 0.46
ERCC1-205ENST00000587888 SUCLG2Q96I99 432 aa17.9■□□□□ 0.46
ERCC1-205ENST00000587888 SPDYE2BA6NHP3 402 aa17.89■□□□□ 0.45
ERCC1-205ENST00000587888 PPP1R12BO60237 982 aaPredicted RBP17.89■□□□□ 0.45
ERCC1-205ENST00000587888 SPDYE6P0CI01 402 aa17.89■□□□□ 0.45
ERCC1-205ENST00000587888 CLMNQ96JQ2 1002 aa17.89■□□□□ 0.45
ERCC1-205ENST00000587888 R3HDMLQ9H3Y0 253 aa17.89■□□□□ 0.45
ERCC1-205ENST00000587888 HPS5Q9UPZ3 1129 aa17.89■□□□□ 0.45
ERCC1-205ENST00000587888 AOX1Q06278 1338 aa17.89■□□□□ 0.45
ERCC1-205ENST00000587888 NBPF7P0C2Y1 421 aaPredicted RBP17.88■□□□□ 0.45
ERCC1-205ENST00000587888 HIBADHP31937 336 aaKnown RBP17.88■□□□□ 0.45
ERCC1-205ENST00000587888 PKN2Q16513 984 aaKnown RBP17.88■□□□□ 0.45
ERCC1-205ENST00000587888 SUPT20HL1Q3ZLR7 823 aa17.88■□□□□ 0.45
ERCC1-205ENST00000587888 NBPF12Q5TAG4 269 aaPredicted RBP17.88■□□□□ 0.45
ERCC1-205ENST00000587888 KAZALD1Q96I82 304 aa17.88■□□□□ 0.45
ERCC1-205ENST00000587888 PPP2R3BQ9Y5P8 575 aa17.88■□□□□ 0.45
ERCC1-205ENST00000587888 UBE4AQ14139 1066 aa17.87■□□□□ 0.45
ERCC1-205ENST00000587888 MFSD14BQ5SR56 506 aa17.87■□□□□ 0.45
ERCC1-205ENST00000587888 TDRD7Q8NHU6 1098 aaKnown RBP17.87■□□□□ 0.45
ERCC1-205ENST00000587888 FAM84BQ96KN1 310 aaPredicted RBP17.87■□□□□ 0.45
ERCC1-205ENST00000587888 A0A1B0GUL6 1792 aa17.86■□□□□ 0.45
ERCC1-205ENST00000587888 MANSC4A6NHS7 340 aaPredicted RBP17.86■□□□□ 0.45
ERCC1-205ENST00000587888 FKTNO75072 461 aa17.86■□□□□ 0.45
ERCC1-205ENST00000587888 RASA3Q14644 834 aa17.86■□□□□ 0.45
ERCC1-205ENST00000587888 MAP3K11Q16584 847 aa17.86■□□□□ 0.45
ERCC1-205ENST00000587888 TDRD3Q9H7E2 651 aaKnown RBP17.86■□□□□ 0.45
ERCC1-205ENST00000587888 TTF2Q9UNY4 1162 aaKnown RBP17.86■□□□□ 0.45
ERCC1-205ENST00000587888 FAM205AQ6ZU69 1335 aa17.86■□□□□ 0.45
ERCC1-205ENST00000587888 COL1A1P02452 1464 aaPredicted RBP17.86■□□□□ 0.45
ERCC1-205ENST00000587888 USP2O75604 605 aaPredicted RBP17.85■□□□□ 0.45
ERCC1-205ENST00000587888 ALDH1A1P00352 501 aa17.85■□□□□ 0.45
ERCC1-205ENST00000587888 IREB2P48200 963 aaKnown RBP17.85■□□□□ 0.45
ERCC1-205ENST00000587888 INHBEP58166 350 aa17.85■□□□□ 0.45
ERCC1-205ENST00000587888 IFNL1Q8IU54 200 aa17.85■□□□□ 0.45
ERCC1-205ENST00000587888 WNK4Q96J92 1243 aa17.85■□□□□ 0.45
ERCC1-205ENST00000587888 BICC1Q9H694 974 aaKnown RBP17.85■□□□□ 0.45
ERCC1-205ENST00000587888 ZNF70Q9UC06 446 aaPredicted RBP17.85■□□□□ 0.45
ERCC1-205ENST00000587888 IQSEC3Q9UPP2 1182 aaPredicted RBP17.85■□□□□ 0.45
ERCC1-205ENST00000587888 RIPOR2Q9Y4F9 1068 aa17.85■□□□□ 0.45
ERCC1-205ENST00000587888 NOM1Q5C9Z4 860 aaKnown RBP17.84■□□□□ 0.45
ERCC1-205ENST00000587888 VPS37DQ86XT2 251 aa17.84■□□□□ 0.45
ERCC1-205ENST00000587888 MRPL50Q8N5N7 158 aaKnown RBP17.84■□□□□ 0.45
ERCC1-205ENST00000587888 SSC5DA1L4H1 1573 aa17.83■□□□□ 0.45
ERCC1-205ENST00000587888 MROH5Q6ZUA9 1318 aa17.83■□□□□ 0.44
ERCC1-205ENST00000587888 FRAT2O75474 233 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-205ENST00000587888 ZBTB48P10074 688 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-205ENST00000587888 CHAF1AQ13111 956 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-205ENST00000587888 LRRC24Q50LG9 513 aa17.83■□□□□ 0.44
ERCC1-205ENST00000587888 CFHR5Q9BXR6 569 aa17.83■□□□□ 0.44
ERCC1-205ENST00000587888 SERPINA10Q9UK55 444 aa17.83■□□□□ 0.44
ERCC1-205ENST00000587888 ECM29Q5VYK3 1845 aa17.83■□□□□ 0.44
ERCC1-205ENST00000587888 UTYO14607 1347 aa17.82■□□□□ 0.44
ERCC1-205ENST00000587888 TCP10L2B9ZVM9 353 aa17.82■□□□□ 0.44
ERCC1-205ENST00000587888 TNFAIP1Q13829 316 aa17.82■□□□□ 0.44
ERCC1-205ENST00000587888 SPDYE2Q495Y8 402 aa17.82■□□□□ 0.44
ERCC1-205ENST00000587888 METTL24Q5JXM2 366 aa17.82■□□□□ 0.44
ERCC1-205ENST00000587888 FBXO46Q6PJ61 603 aaPredicted RBP17.82■□□□□ 0.44
ERCC1-205ENST00000587888 DZIP1LQ8IYY4 767 aaKnown RBP17.82■□□□□ 0.44
ERCC1-205ENST00000587888 ANKRD13AQ8IZ07 590 aa17.82■□□□□ 0.44
ERCC1-205ENST00000587888 UNCXA6NJT0 531 aa17.81■□□□□ 0.44
ERCC1-205ENST00000587888 IGF2BP3O00425 579 aaKnown RBP eCLIP17.81■□□□□ 0.44
ERCC1-205ENST00000587888 GJA5P36382 358 aa17.81■□□□□ 0.44
ERCC1-205ENST00000587888 CRKP46108 304 aa17.81■□□□□ 0.44
ERCC1-205ENST00000587888 GRIK5Q16478 980 aa17.81■□□□□ 0.44
ERCC1-205ENST00000587888 CAVIN4Q5BKX8 364 aa17.81■□□□□ 0.44
ERCC1-205ENST00000587888 FBXO33Q7Z6M2 555 aa17.81■□□□□ 0.44
ERCC1-205ENST00000587888 ANKRD44Q8N8A2 993 aa17.81■□□□□ 0.44
ERCC1-205ENST00000587888 KLHDC4Q8TBB5 520 aa17.81■□□□□ 0.44
ERCC1-205ENST00000587888 ELP3Q9H9T3 547 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms