RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 SSH1Q8WYL5 1049 aa23.71■■□□□ 1.39
TRIM47-205ENST00000587774 ABHD8Q96I13 439 aa23.71■■□□□ 1.39
TRIM47-205ENST00000587774 ZBED3Q96IU2 234 aaPredicted RBP23.71■■□□□ 1.39
TRIM47-205ENST00000587774 BICC1Q9H694 974 aaKnown RBP23.7■■□□□ 1.38
TRIM47-205ENST00000587774 APOBEC3FQ8IUX4 373 aaKnown RBP23.69■■□□□ 1.38
TRIM47-205ENST00000587774 PUS3Q9BZE2 481 aaKnown RBP23.69■■□□□ 1.38
TRIM47-205ENST00000587774 JAG2Q9Y219 1238 aa23.69■■□□□ 1.38
TRIM47-205ENST00000587774 RABL6Q3YEC7 729 aaPredicted RBP23.68■■□□□ 1.38
TRIM47-205ENST00000587774 CDCA7LQ96GN5 454 aa23.68■■□□□ 1.38
TRIM47-205ENST00000587774 F8W031 263 aaPredicted RBP23.67■■□□□ 1.38
TRIM47-205ENST00000587774 ANKRD44Q8N8A2 993 aa23.67■■□□□ 1.38
TRIM47-205ENST00000587774 SAGE1Q9NXZ1 904 aa23.67■■□□□ 1.38
TRIM47-205ENST00000587774 PCDHAC2Q9Y5I4 1007 aa23.67■■□□□ 1.38
TRIM47-205ENST00000587774 SSC5DA1L4H1 1573 aa23.66■■□□□ 1.38
TRIM47-205ENST00000587774 UBE2Q2LH0YL09 131 aa23.66■■□□□ 1.38
TRIM47-205ENST00000587774 FKBP1AP62942 108 aaKnown RBP23.66■■□□□ 1.38
TRIM47-205ENST00000587774 TTLL12Q14166 644 aaPredicted RBP23.66■■□□□ 1.38
TRIM47-205ENST00000587774 NF2P35240 595 aa23.65■■□□□ 1.38
TRIM47-205ENST00000587774 UBE4AQ14139 1066 aa23.65■■□□□ 1.38
TRIM47-205ENST00000587774 DLGAP5Q15398 846 aa23.65■■□□□ 1.38
TRIM47-205ENST00000587774 MTMR14Q8NCE2 650 aa23.65■■□□□ 1.38
TRIM47-205ENST00000587774 CSRNP1Q96S65 589 aa23.65■■□□□ 1.38
TRIM47-205ENST00000587774 RIPOR2Q9Y4F9 1068 aa23.65■■□□□ 1.38
TRIM47-205ENST00000587774 MROH5Q6ZUA9 1318 aa23.64■■□□□ 1.38
TRIM47-205ENST00000587774 GYG1P46976 350 aa23.64■■□□□ 1.37
TRIM47-205ENST00000587774 RNF186Q9NXI6 227 aa23.64■■□□□ 1.37
TRIM47-205ENST00000587774 FAM205AQ6ZU69 1335 aa23.63■■□□□ 1.37
TRIM47-205ENST00000587774 AK9Q5TCS8 1911 aa23.63■■□□□ 1.37
TRIM47-205ENST00000587774 TRPA1O75762 1119 aa23.63■■□□□ 1.37
TRIM47-205ENST00000587774 ALDH1L2Q3SY69 923 aa23.63■■□□□ 1.37
TRIM47-205ENST00000587774 CFAP100Q494V2 611 aa23.63■■□□□ 1.37
TRIM47-205ENST00000587774 SMC4Q9NTJ3 1288 aa23.63■■□□□ 1.37
TRIM47-205ENST00000587774 TNRC18O15417 2968 aaPredicted RBP23.63■■□□□ 1.37
TRIM47-205ENST00000587774 AOX1Q06278 1338 aa23.62■■□□□ 1.37
TRIM47-205ENST00000587774 SPDYE2BA6NHP3 402 aa23.62■■□□□ 1.37
TRIM47-205ENST00000587774 SPDYE6P0CI01 402 aa23.62■■□□□ 1.37
TRIM47-205ENST00000587774 LRRC24Q50LG9 513 aa23.62■■□□□ 1.37
TRIM47-205ENST00000587774 TRMT2AQ8IZ69 625 aaKnown RBP23.62■■□□□ 1.37
TRIM47-205ENST00000587774 TDRD7Q8NHU6 1098 aaKnown RBP23.62■■□□□ 1.37
TRIM47-205ENST00000587774 MCOLN1Q9GZU1 580 aa23.62■■□□□ 1.37
TRIM47-205ENST00000587774 USP44Q9H0E7 712 aa23.62■■□□□ 1.37
TRIM47-205ENST00000587774 HIBADHP31937 336 aaKnown RBP23.61■■□□□ 1.37
TRIM47-205ENST00000587774 PRKG1Q13976 671 aa23.61■■□□□ 1.37
TRIM47-205ENST00000587774 KLHDC4Q8TBB5 520 aa23.61■■□□□ 1.37
TRIM47-205ENST00000587774 FAM84BQ96KN1 310 aaPredicted RBP23.61■■□□□ 1.37
TRIM47-205ENST00000587774 DEFB129Q9H1M3 183 aa23.61■■□□□ 1.37
TRIM47-205ENST00000587774 CLRN2A0PK11 232 aa23.6■■□□□ 1.37
TRIM47-205ENST00000587774 MFSD14BQ5SR56 506 aa23.6■■□□□ 1.37
TRIM47-205ENST00000587774 REM2Q8IYK8 340 aaPredicted RBP23.6■■□□□ 1.37
TRIM47-205ENST00000587774 VGLL2Q8N8G2 317 aa23.6■■□□□ 1.37
TRIM47-205ENST00000587774 PRMT6Q96LA8 375 aaPredicted RBP23.6■■□□□ 1.37
TRIM47-205ENST00000587774 FZD1Q9UP38 647 aa23.6■■□□□ 1.37
TRIM47-205ENST00000587774 MYO1BO43795 1136 aa23.59■■□□□ 1.37
TRIM47-205ENST00000587774 DGKZQ13574 1117 aa23.59■■□□□ 1.37
TRIM47-205ENST00000587774 METTL24Q5JXM2 366 aa23.59■■□□□ 1.37
TRIM47-205ENST00000587774 MYH2Q9UKX2 1941 aa23.59■■□□□ 1.37
TRIM47-205ENST00000587774 PTPN12Q05209 780 aaKnown RBP23.58■■□□□ 1.37
TRIM47-205ENST00000587774 ARMC9Q7Z3E5 817 aa23.58■■□□□ 1.37
TRIM47-205ENST00000587774 ANGEL1Q9UNK9 670 aaKnown RBP23.58■■□□□ 1.37
TRIM47-205ENST00000587774 PPP2R3BQ9Y5P8 575 aa23.58■■□□□ 1.37
TRIM47-205ENST00000587774 CCDC85CA6NKD9 419 aa23.57■■□□□ 1.36
TRIM47-205ENST00000587774 CCER2I3L3R5 266 aa23.57■■□□□ 1.36
TRIM47-205ENST00000587774 RBM5P52756 815 aaKnown RBP eCLIP23.57■■□□□ 1.36
TRIM47-205ENST00000587774 MKRN3Q13064 507 aaKnown RBP23.57■■□□□ 1.36
TRIM47-205ENST00000587774 VEZTQ9HBM0 779 aa23.57■■□□□ 1.36
TRIM47-205ENST00000587774 TTF2Q9UNY4 1162 aaKnown RBP23.57■■□□□ 1.36
TRIM47-205ENST00000587774 IQSEC3Q9UPP2 1182 aaPredicted RBP23.57■■□□□ 1.36
TRIM47-205ENST00000587774 PDE8BO95263 885 aa23.56■■□□□ 1.36
TRIM47-205ENST00000587774 LDLRAD1Q5T700 205 aa23.55■■□□□ 1.36
TRIM47-205ENST00000587774 FBXO33Q7Z6M2 555 aa23.55■■□□□ 1.36
TRIM47-205ENST00000587774 VPS37DQ86XT2 251 aa23.55■■□□□ 1.36
TRIM47-205ENST00000587774 CT47B1P0C2W7 299 aaPredicted RBP23.54■■□□□ 1.36
TRIM47-205ENST00000587774 SERPINA10Q9UK55 444 aa23.54■■□□□ 1.36
TRIM47-205ENST00000587774 CENPFP49454 3210 aa23.54■■□□□ 1.36
TRIM47-205ENST00000587774 DOCK2Q92608 1830 aa23.54■■□□□ 1.36
TRIM47-205ENST00000587774 HTTP42858 3142 aa23.53■■□□□ 1.36
TRIM47-205ENST00000587774 RFX5P48382 616 aaPredicted RBP23.53■■□□□ 1.36
TRIM47-205ENST00000587774 CHAF1AQ13111 956 aaPredicted RBP23.53■■□□□ 1.36
TRIM47-205ENST00000587774 GRIK5Q16478 980 aa23.53■■□□□ 1.36
TRIM47-205ENST00000587774 SPDYE2Q495Y8 402 aa23.53■■□□□ 1.36
TRIM47-205ENST00000587774 CAVIN4Q5BKX8 364 aa23.53■■□□□ 1.36
TRIM47-205ENST00000587774 PUM3Q15397 648 aaKnown RBP23.52■■□□□ 1.36
TRIM47-205ENST00000587774 MAP3K11Q16584 847 aa23.52■■□□□ 1.36
TRIM47-205ENST00000587774 NBPF12Q5TAG4 269 aaPredicted RBP23.52■■□□□ 1.36
TRIM47-205ENST00000587774 NOB1Q9ULX3 412 aaKnown RBP23.52■■□□□ 1.36
TRIM47-205ENST00000587774 KIF16BQ96L93 1317 aa23.52■■□□□ 1.36
TRIM47-205ENST00000587774 PPP1R12BO60237 982 aaPredicted RBP23.51■■□□□ 1.35
TRIM47-205ENST00000587774 FGFR2P21802 821 aa23.51■■□□□ 1.35
TRIM47-205ENST00000587774 CRKP46108 304 aa23.51■■□□□ 1.35
TRIM47-205ENST00000587774 TM4SF4P48230 202 aa23.51■■□□□ 1.35
TRIM47-205ENST00000587774 RASA3Q14644 834 aa23.51■■□□□ 1.35
TRIM47-205ENST00000587774 TDRD3Q9H7E2 651 aaKnown RBP23.51■■□□□ 1.35
TRIM47-205ENST00000587774 ZNF70Q9UC06 446 aaPredicted RBP23.51■■□□□ 1.35
TRIM47-205ENST00000587774 EYA2O00167 538 aa23.5■■□□□ 1.35
TRIM47-205ENST00000587774 FRAT2O75474 233 aaPredicted RBP23.5■■□□□ 1.35
TRIM47-205ENST00000587774 UBTFL1P0CB47 393 aaPredicted RBP23.5■■□□□ 1.35
TRIM47-205ENST00000587774 BCAMP50895 628 aa23.5■■□□□ 1.35
TRIM47-205ENST00000587774 SREBF2Q12772 1141 aa23.5■■□□□ 1.35
TRIM47-205ENST00000587774 SUPT20HL1Q3ZLR7 823 aa23.5■■□□□ 1.35
TRIM47-205ENST00000587774 SPRYD7Q5W111 196 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms