RNA–Protein interactions for RNA: ENST00000587480.1

TMC6-208, Transcript of transmembrane channel like 6, human

Gene TMC6, Length 253 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-208	ENST00000587480	CNTROB	Q8N137	903 aa		29.12	■■■□□ 2.25
TMC6-208	ENST00000587480	CERS5	Q8N5B7	392 aa		29.12	■■■□□ 2.25
TMC6-208	ENST00000587480	FBXW7	Q969H0	707 aa		29.12	■■■□□ 2.25
TMC6-208	ENST00000587480	MXD3	Q9BW11	206 aa		29.12	■■■□□ 2.25
TMC6-208	ENST00000587480	EGFR	P00533	1210 aa		29.11	■■■□□ 2.25
TMC6-208	ENST00000587480	BCAM	P50895	628 aa		29.11	■■■□□ 2.25
TMC6-208	ENST00000587480	TFCP2	Q12800	502 aa		29.11	■■■□□ 2.25
TMC6-208	ENST00000587480	OGFOD1	Q8N543	542 aa		29.11	■■■□□ 2.25
TMC6-208	ENST00000587480	CEP350	Q5VT06	3117 aa		29.11	■■■□□ 2.25
TMC6-208	ENST00000587480	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	29.1	■■■□□ 2.25
TMC6-208	ENST00000587480	MAP1S	Q66K74	1059 aa	Predicted RBP	29.1	■■■□□ 2.25
TMC6-208	ENST00000587480	MYOZ2	Q9NPC6	264 aa		29.1	■■■□□ 2.25
TMC6-208	ENST00000587480	GPR108	Q9NPR9	543 aa		29.09	■■■□□ 2.25
TMC6-208	ENST00000587480	TBC1D22A	Q8WUA7	517 aa		29.08	■■■□□ 2.25
TMC6-208	ENST00000587480		A0A1B0GUL7	405 aa		29.07	■■■□□ 2.24
TMC6-208	ENST00000587480	SURF6	O75683	361 aa	Known RBP	29.07	■■■□□ 2.24
TMC6-208	ENST00000587480	HDAC9	Q9UKV0	1011 aa		29.07	■■■□□ 2.24
TMC6-208	ENST00000587480	MYH13	Q9UKX3	1938 aa		29.07	■■■□□ 2.24
TMC6-208	ENST00000587480	SEMA3E	O15041	775 aa		29.06	■■■□□ 2.24
TMC6-208	ENST00000587480	MFSD14B	Q5SR56	506 aa		29.06	■■■□□ 2.24
TMC6-208	ENST00000587480	KIAA0825	Q8IV33	1275 aa		29.06	■■■□□ 2.24
TMC6-208	ENST00000587480	MTMR14	Q8NCE2	650 aa		29.06	■■■□□ 2.24
TMC6-208	ENST00000587480	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	29.06	■■■□□ 2.24
TMC6-208	ENST00000587480	PITPNM2	Q9BZ72	1349 aa		29.05	■■■□□ 2.24
TMC6-208	ENST00000587480	HMMR	O75330	724 aa		29.05	■■■□□ 2.24
TMC6-208	ENST00000587480	SIRT2	Q8IXJ6	389 aa		29.05	■■■□□ 2.24
TMC6-208	ENST00000587480	ZBED3	Q96IU2	234 aa	Predicted RBP	29.05	■■■□□ 2.24
TMC6-208	ENST00000587480	GNL3L	Q9NVN8	582 aa	Known RBP	29.05	■■■□□ 2.24
TMC6-208	ENST00000587480	SUGT1	Q9Y2Z0	365 aa		29.05	■■■□□ 2.24
TMC6-208	ENST00000587480	PDS5A	Q29RF7	1337 aa	Known RBP	29.04	■■■□□ 2.24
TMC6-208	ENST00000587480	TIMM10	P62072	90 aa		29.04	■■■□□ 2.24
TMC6-208	ENST00000587480	COL1A1	P02452	1464 aa	Predicted RBP	29.04	■■■□□ 2.24
TMC6-208	ENST00000587480	FRAT2	O75474	233 aa	Predicted RBP	29.03	■■■□□ 2.24
TMC6-208	ENST00000587480	ADORA1	P30542	326 aa		29.03	■■■□□ 2.24
TMC6-208	ENST00000587480	HSP90AB4P	Q58FF6	505 aa		29.03	■■■□□ 2.24
TMC6-208	ENST00000587480	CDC37L1	Q7L3B6	337 aa		29.03	■■■□□ 2.24
TMC6-208	ENST00000587480	ERC1	Q8IUD2	1116 aa		29.03	■■■□□ 2.24
TMC6-208	ENST00000587480	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	29.03	■■■□□ 2.24
TMC6-208	ENST00000587480	TRPM7	Q96QT4	1865 aa		29.02	■■■□□ 2.24
TMC6-208	ENST00000587480	PHKA1	P46020	1223 aa		29.02	■■■□□ 2.24
TMC6-208	ENST00000587480	OS9	Q13438	667 aa	Predicted RBP	29.02	■■■□□ 2.24
TMC6-208	ENST00000587480	RBM26	Q5T8P6	1007 aa	Known RBP	29.02	■■■□□ 2.24
TMC6-208	ENST00000587480	CCDC102B	Q68D86	513 aa		29.02	■■■□□ 2.24
TMC6-208	ENST00000587480	WDR66	Q8TBY9	1149 aa		29.02	■■■□□ 2.24
TMC6-208	ENST00000587480	XAGE2	Q96GT9	111 aa		29.02	■■■□□ 2.24
TMC6-208	ENST00000587480	SCARF1	Q14162	830 aa		29.01	■■■□□ 2.23
TMC6-208	ENST00000587480	CREBZF	Q9NS37	354 aa		29.01	■■■□□ 2.23
TMC6-208	ENST00000587480	GGA3	Q9NZ52	723 aa		29.01	■■■□□ 2.23
TMC6-208	ENST00000587480	JAG2	Q9Y219	1238 aa		29.01	■■■□□ 2.23
TMC6-208	ENST00000587480	SALL1	Q9NSC2	1324 aa		29	■■■□□ 2.23
TMC6-208	ENST00000587480	WNT10B	O00744	389 aa		29	■■■□□ 2.23
TMC6-208	ENST00000587480	TNNI3K	Q59H18	835 aa		29	■■■□□ 2.23
TMC6-208	ENST00000587480	DCPS	Q96C86	337 aa	Known RBP	29	■■■□□ 2.23
TMC6-208	ENST00000587480	DENND2A	Q9ULE3	1009 aa		29	■■■□□ 2.23
TMC6-208	ENST00000587480	FPGT-TNNI3K	V9GXZ4	949 aa		29	■■■□□ 2.23
TMC6-208	ENST00000587480	POLR2A	P24928	1970 aa	Known RBP	28.99	■■■□□ 2.23
TMC6-208	ENST00000587480	HDLBP	Q00341	1268 aa	Known RBP	28.99	■■■□□ 2.23
TMC6-208	ENST00000587480	CHAF1A	Q13111	956 aa	Predicted RBP	28.99	■■■□□ 2.23
TMC6-208	ENST00000587480	GLIS2	Q9BZE0	524 aa	Predicted RBP	28.99	■■■□□ 2.23
TMC6-208	ENST00000587480	SERPINA10	Q9UK55	444 aa		28.99	■■■□□ 2.23
TMC6-208	ENST00000587480	ECM29	Q5VYK3	1845 aa		28.99	■■■□□ 2.23
TMC6-208	ENST00000587480	MRI	Q9BWK5	157 aa		28.98	■■■□□ 2.23
TMC6-208	ENST00000587480	NBPF9	Q3BBW0	867 aa		28.97	■■■□□ 2.23
TMC6-208	ENST00000587480	KRT26	Q7Z3Y9	468 aa		28.97	■■■□□ 2.23
TMC6-208	ENST00000587480	EXOC6B	Q9Y2D4	811 aa		28.97	■■■□□ 2.23
TMC6-208	ENST00000587480	MAST3	O60307	1309 aa		28.96	■■■□□ 2.23
TMC6-208	ENST00000587480	ASTN2	O75129	1339 aa	Predicted RBP	28.96	■■■□□ 2.23
TMC6-208	ENST00000587480	SPDYE2B	A6NHP3	402 aa		28.96	■■■□□ 2.23
TMC6-208	ENST00000587480	TMEM88B	A6NKF7	163 aa		28.96	■■■□□ 2.23
TMC6-208	ENST00000587480	SPDYE6	P0CI01	402 aa		28.96	■■■□□ 2.23
TMC6-208	ENST00000587480	ARID4A	P29374	1257 aa	Predicted RBP	28.96	■■■□□ 2.23
TMC6-208	ENST00000587480	DLGAP5	Q15398	846 aa		28.96	■■■□□ 2.23
TMC6-208	ENST00000587480	ANGEL2	Q5VTE6	544 aa	Known RBP	28.96	■■■□□ 2.23
TMC6-208	ENST00000587480	NEUROD6	Q96NK8	337 aa		28.96	■■■□□ 2.23
TMC6-208	ENST00000587480	TTF2	Q9UNY4	1162 aa	Known RBP	28.96	■■■□□ 2.23
TMC6-208	ENST00000587480	TRAF5	O00463	557 aa		28.95	■■■□□ 2.22
TMC6-208	ENST00000587480	RASGRF1	Q13972	1273 aa		28.95	■■■□□ 2.22
TMC6-208	ENST00000587480	CFAP100	Q494V2	611 aa		28.95	■■■□□ 2.22
TMC6-208	ENST00000587480	SULF1	Q8IWU6	871 aa		28.95	■■■□□ 2.22
TMC6-208	ENST00000587480		F8W031	263 aa	Predicted RBP	28.94	■■■□□ 2.22
TMC6-208	ENST00000587480	RAB11FIP3	O75154	756 aa		28.94	■■■□□ 2.22
TMC6-208	ENST00000587480	GRIK5	Q16478	980 aa		28.94	■■■□□ 2.22
TMC6-208	ENST00000587480	DNAJC5G	Q8N7S2	189 aa		28.94	■■■□□ 2.22
TMC6-208	ENST00000587480	USP48	Q86UV5	1035 aa		28.93	■■■□□ 2.22
TMC6-208	ENST00000587480	ZGPAT	Q8N5A5	531 aa	Known RBP	28.93	■■■□□ 2.22
TMC6-208	ENST00000587480	KIF1BP	Q96EK5	621 aa		28.93	■■■□□ 2.22
TMC6-208	ENST00000587480	ZNF512B	Q96KM6	892 aa	Predicted RBP	28.93	■■■□□ 2.22
TMC6-208	ENST00000587480	UQCRFS1P1	P0C7P4	283 aa		28.92	■■■□□ 2.22
TMC6-208	ENST00000587480	AAMP	Q13685	434 aa		28.92	■■■□□ 2.22
TMC6-208	ENST00000587480	GORAB	Q5T7V8	394 aa		28.92	■■■□□ 2.22
TMC6-208	ENST00000587480	CST9	Q5W186	159 aa		28.92	■■■□□ 2.22
TMC6-208	ENST00000587480	RHPN1	Q8TCX5	695 aa		28.92	■■■□□ 2.22
TMC6-208	ENST00000587480	FMR1	Q06787	632 aa	Known RBP eCLIP	28.91	■■■□□ 2.22
TMC6-208	ENST00000587480	APOBEC3F	Q8IUX4	373 aa	Known RBP	28.91	■■■□□ 2.22
TMC6-208	ENST00000587480	EAF2	Q96CJ1	260 aa	Predicted RBP	28.91	■■■□□ 2.22
TMC6-208	ENST00000587480	DBNDD2	Q9BQY9	259 aa		28.91	■■■□□ 2.22
TMC6-208	ENST00000587480	ADM5	C9JUS6	153 aa		28.9	■■■□□ 2.22
TMC6-208	ENST00000587480	CRK	P46108	304 aa		28.9	■■■□□ 2.22
TMC6-208	ENST00000587480	HTRA3	P83110	453 aa		28.9	■■■□□ 2.22
TMC6-208	ENST00000587480	CRBN	Q96SW2	442 aa		28.9	■■■□□ 2.22

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms