RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 GPRC5DQ9NZD1 345 aa8.08□□□□□ -1.12
NPC1-206ENST00000587223 IQSEC3Q9UPP2 1182 aaPredicted RBP8.08□□□□□ -1.12
NPC1-206ENST00000587223 CLEC11AQ9Y240 323 aa8.08□□□□□ -1.12
NPC1-206ENST00000587223 EXOC6BQ9Y2D4 811 aa8.08□□□□□ -1.12
NPC1-206ENST00000587223 UTRNP46939 3433 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 SPDYE2BA6NHP3 402 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 APBB1O00213 710 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 RAB11FIP3O75154 756 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 USP17L8P0C7I0 530 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 SPDYE6P0CI01 402 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 CHAF1AQ13111 956 aaPredicted RBP8.07□□□□□ -1.12
NPC1-206ENST00000587223 AAMPQ13685 434 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 SPDYE2Q495Y8 402 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 DACT2Q5SW24 774 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 RBM26Q5T8P6 1007 aaKnown RBP8.07□□□□□ -1.12
NPC1-206ENST00000587223 MICALL2Q8IY33 904 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 OGFOD1Q8N543 542 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 XAGE2Q96GT9 111 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 MXD3Q9BW11 206 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 BCL11AQ9H165 835 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 GPR108Q9NPR9 543 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 ADARB2Q9NS39 739 aaKnown RBP8.07□□□□□ -1.12
NPC1-206ENST00000587223 JAG2Q9Y219 1238 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 PCDHB15Q9Y5E8 787 aa8.07□□□□□ -1.12
NPC1-206ENST00000587223 MYO3BQ8WXR4 1341 aa8.06□□□□□ -1.12
NPC1-206ENST00000587223 ADORA1P30542 326 aa8.06□□□□□ -1.12
NPC1-206ENST00000587223 PHKA1P46020 1223 aa8.06□□□□□ -1.12
NPC1-206ENST00000587223 TNNI3KQ59H18 835 aa8.06□□□□□ -1.12
NPC1-206ENST00000587223 CCDC102BQ68D86 513 aa8.06□□□□□ -1.12
NPC1-206ENST00000587223 USP50Q70EL3 339 aaPredicted RBP8.06□□□□□ -1.12
NPC1-206ENST00000587223 EXOC6Q8TAG9 804 aa8.06□□□□□ -1.12
NPC1-206ENST00000587223 RBM46Q8TBY0 533 aaKnown RBP8.06□□□□□ -1.12
NPC1-206ENST00000587223 RHPN1Q8TCX5 695 aa8.06□□□□□ -1.12
NPC1-206ENST00000587223 KIF1BPQ96EK5 621 aa8.06□□□□□ -1.12
NPC1-206ENST00000587223 GMLQ99445 158 aa8.06□□□□□ -1.12
NPC1-206ENST00000587223 HDAC9Q9UKV0 1011 aa8.06□□□□□ -1.12
NPC1-206ENST00000587223 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.06□□□□□ -1.12
NPC1-206ENST00000587223 FPGT-TNNI3KV9GXZ4 949 aa8.06□□□□□ -1.12
NPC1-206ENST00000587223 SCN9AQ15858 1988 aa8.06□□□□□ -1.12
NPC1-206ENST00000587223 WDR90Q96KV7 1748 aa8.06□□□□□ -1.12
NPC1-206ENST00000587223 SCN4AP35499 1836 aa8.06□□□□□ -1.12
NPC1-206ENST00000587223 FAM205AQ6ZU69 1335 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 A0A1B0GUL6 1792 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 SHTN1A0MZ66 631 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 F8W031 263 aaPredicted RBP8.05□□□□□ -1.12
NPC1-206ENST00000587223 SEMA3EO15041 775 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 MMP14P50281 582 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 FKBP1AP62942 108 aaKnown RBP8.05□□□□□ -1.12
NPC1-206ENST00000587223 IRX6P78412 446 aaPredicted RBP8.05□□□□□ -1.12
NPC1-206ENST00000587223 TBC1D10BQ4KMP7 808 aaPredicted RBP8.05□□□□□ -1.12
NPC1-206ENST00000587223 CCDC158Q5M9N0 1113 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 MFSD14BQ5SR56 506 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 CHADLQ6NUI6 762 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 SAMD7Q7Z3H4 446 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 LDHDQ86WU2 507 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 KIAA0825Q8IV33 1275 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 CLASRPQ8N2M8 674 aaKnown RBP8.05□□□□□ -1.12
NPC1-206ENST00000587223 SMC1BQ8NDV3 1235 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 WDR66Q8TBY9 1149 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 TBC1D22AQ8WUA7 517 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 SPOCK2Q92563 424 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 EAF2Q96CJ1 260 aaPredicted RBP8.05□□□□□ -1.12
NPC1-206ENST00000587223 CCDC8Q9H0W5 538 aaPredicted RBP8.05□□□□□ -1.12
NPC1-206ENST00000587223 DCTPP1Q9H773 170 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 IL1RAPL2Q9NP60 686 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 DENND2AQ9ULE3 1009 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 SSUH2Q9Y2M2 353 aa8.05□□□□□ -1.12
NPC1-206ENST00000587223 IFIT2P09913 472 aaKnown RBP8.04□□□□□ -1.12
NPC1-206ENST00000587223 UQCRFS1P1P0C7P4 283 aa8.04□□□□□ -1.12
NPC1-206ENST00000587223 POTEIP0CG38 1075 aa8.04□□□□□ -1.12
NPC1-206ENST00000587223 POTEJP0CG39 1038 aa8.04□□□□□ -1.12
NPC1-206ENST00000587223 HIRAP54198 1017 aaPredicted RBP8.04□□□□□ -1.12
NPC1-206ENST00000587223 ZNF280AP59817 542 aaPredicted RBP8.04□□□□□ -1.12
NPC1-206ENST00000587223 C1QTNF8P60827 252 aa8.04□□□□□ -1.12
NPC1-206ENST00000587223 FSTL1Q12841 308 aa8.04□□□□□ -1.12
NPC1-206ENST00000587223 TTC39AQ5SRH9 613 aa8.04□□□□□ -1.12
NPC1-206ENST00000587223 AACSQ86V21 672 aa8.04□□□□□ -1.12
NPC1-206ENST00000587223 PLCD3Q8N3E9 789 aa8.04□□□□□ -1.12
NPC1-206ENST00000587223 CERS5Q8N5B7 392 aa8.04□□□□□ -1.12
NPC1-206ENST00000587223 TRPM4Q8TD43 1214 aa8.04□□□□□ -1.12
NPC1-206ENST00000587223 DBNDD2Q9BQY9 259 aa8.04□□□□□ -1.12
NPC1-206ENST00000587223 LRRCC1Q9C099 1032 aa8.04□□□□□ -1.12
NPC1-206ENST00000587223 MYOZ2Q9NPC6 264 aa8.04□□□□□ -1.12
NPC1-206ENST00000587223 ZBTB47Q9UFB7 747 aaPredicted RBP8.04□□□□□ -1.12
NPC1-206ENST00000587223 TTF2Q9UNY4 1162 aaKnown RBP8.04□□□□□ -1.12
NPC1-206ENST00000587223 CENPBP07199 599 aaPredicted RBP8.03□□□□□ -1.12
NPC1-206ENST00000587223 RBM5P52756 815 aaKnown RBP eCLIP8.03□□□□□ -1.12
NPC1-206ENST00000587223 SCARF1Q14162 830 aa8.03□□□□□ -1.12
NPC1-206ENST00000587223 DLGAP5Q15398 846 aa8.03□□□□□ -1.12
NPC1-206ENST00000587223 KIF4BQ2VIQ3 1234 aa8.03□□□□□ -1.12
NPC1-206ENST00000587223 MAP1SQ66K74 1059 aaPredicted RBP8.03□□□□□ -1.12
NPC1-206ENST00000587223 CNTROBQ8N137 903 aa8.03□□□□□ -1.12
NPC1-206ENST00000587223 ZC3H15Q8WU90 426 aaKnown RBP8.03□□□□□ -1.12
NPC1-206ENST00000587223 RWDD1Q9H446 243 aaPredicted RBP8.03□□□□□ -1.12
NPC1-206ENST00000587223 DBNLQ9UJU6 430 aaKnown RBP8.03□□□□□ -1.12
NPC1-206ENST00000587223 SUGT1Q9Y2Z0 365 aa8.03□□□□□ -1.12
NPC1-206ENST00000587223 SMARCA5O60264 1052 aaPredicted RBP8.02□□□□□ -1.13
NPC1-206ENST00000587223 EGFRP00533 1210 aa8.02□□□□□ -1.13
NPC1-206ENST00000587223 LDHBP07195 334 aaKnown RBP8.02□□□□□ -1.13
NPC1-206ENST00000587223 HDAC1Q13547 482 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms