RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 VEGFBP49765 207 aa25.22■■□□□ 1.63
VAT1-203ENST00000587062 FAM205AQ6ZU69 1335 aa25.21■■□□□ 1.63
VAT1-203ENST00000587062 MYO1BO43795 1136 aa25.21■■□□□ 1.63
VAT1-203ENST00000587062 IL15P40933 162 aaPredicted RBP25.21■■□□□ 1.63
VAT1-203ENST00000587062 DLGAP5Q15398 846 aa25.21■■□□□ 1.63
VAT1-203ENST00000587062 LPIN2Q92539 896 aa25.21■■□□□ 1.63
VAT1-203ENST00000587062 HHIPL1Q96JK4 782 aa25.21■■□□□ 1.63
VAT1-203ENST00000587062 WDR33Q9C0J8 1336 aaKnown RBP25.2■■□□□ 1.62
VAT1-203ENST00000587062 WNT10BO00744 389 aa25.2■■□□□ 1.62
VAT1-203ENST00000587062 FBXO33Q7Z6M2 555 aa25.2■■□□□ 1.62
VAT1-203ENST00000587062 SAPCD2Q86UD0 394 aa25.2■■□□□ 1.62
VAT1-203ENST00000587062 DZIP1LQ8IYY4 767 aaKnown RBP25.2■■□□□ 1.62
VAT1-203ENST00000587062 VGLL2Q8N8G2 317 aa25.2■■□□□ 1.62
VAT1-203ENST00000587062 TBC1D22AQ8WUA7 517 aa25.2■■□□□ 1.62
VAT1-203ENST00000587062 SIL1Q9H173 461 aa25.2■■□□□ 1.62
VAT1-203ENST00000587062 POLR2AP24928 1970 aaKnown RBP25.19■■□□□ 1.62
VAT1-203ENST00000587062 ADM5C9JUS6 153 aa25.19■■□□□ 1.62
VAT1-203ENST00000587062 SRGAP3O43295 1099 aa25.19■■□□□ 1.62
VAT1-203ENST00000587062 AIDAQ96BJ3 306 aa25.19■■□□□ 1.62
VAT1-203ENST00000587062 GBA2Q9HCG7 927 aaPredicted RBP25.19■■□□□ 1.62
VAT1-203ENST00000587062 COPRSQ9NQ92 184 aa25.19■■□□□ 1.62
VAT1-203ENST00000587062 NF2P35240 595 aa25.18■■□□□ 1.62
VAT1-203ENST00000587062 NBPF9Q3BBW0 867 aa25.18■■□□□ 1.62
VAT1-203ENST00000587062 MFSD14BQ5SR56 506 aa25.18■■□□□ 1.62
VAT1-203ENST00000587062 APOBEC3FQ8IUX4 373 aaKnown RBP25.18■■□□□ 1.62
VAT1-203ENST00000587062 TMEM57Q8N5G2 664 aa25.18■■□□□ 1.62
VAT1-203ENST00000587062 F8W031 263 aaPredicted RBP25.17■■□□□ 1.62
VAT1-203ENST00000587062 HSPA1AP0DMV8 641 aaKnown RBP25.17■■□□□ 1.62
VAT1-203ENST00000587062 HSPA1BP0DMV9 641 aaKnown RBP25.17■■□□□ 1.62
VAT1-203ENST00000587062 RBM5P52756 815 aaKnown RBP eCLIP25.17■■□□□ 1.62
VAT1-203ENST00000587062 MAP2K1Q02750 393 aaPredicted RBP25.17■■□□□ 1.62
VAT1-203ENST00000587062 MTX1Q13505 466 aa25.17■■□□□ 1.62
VAT1-203ENST00000587062 CAPNS2Q96L46 248 aa25.17■■□□□ 1.62
VAT1-203ENST00000587062 GNL3LQ9NVN8 582 aaKnown RBP25.17■■□□□ 1.62
VAT1-203ENST00000587062 GRM1Q13255 1194 aa25.16■■□□□ 1.62
VAT1-203ENST00000587062 ATG9AQ7Z3C6 839 aa25.16■■□□□ 1.62
VAT1-203ENST00000587062 CERS5Q8N5B7 392 aa25.16■■□□□ 1.62
VAT1-203ENST00000587062 MTMR14Q8NCE2 650 aa25.16■■□□□ 1.62
VAT1-203ENST00000587062 AKAP2Q9Y2D5 859 aa25.16■■□□□ 1.62
VAT1-203ENST00000587062 ASTN2O75129 1339 aaPredicted RBP25.15■■□□□ 1.62
VAT1-203ENST00000587062 FGFR2P21802 821 aa25.15■■□□□ 1.62
VAT1-203ENST00000587062 HUNKP57058 714 aa25.15■■□□□ 1.62
VAT1-203ENST00000587062 FKBP1BP68106 108 aa25.15■■□□□ 1.62
VAT1-203ENST00000587062 ATP2B3Q16720 1220 aa25.15■■□□□ 1.62
VAT1-203ENST00000587062 ITPRIPQ8IWB1 547 aa25.15■■□□□ 1.62
VAT1-203ENST00000587062 CDCA5Q96FF9 252 aa25.15■■□□□ 1.62
VAT1-203ENST00000587062 BEGAINQ9BUH8 593 aa25.15■■□□□ 1.62
VAT1-203ENST00000587062 JAG2Q9Y219 1238 aa25.15■■□□□ 1.62
VAT1-203ENST00000587062 BCAMP50895 628 aa25.14■■□□□ 1.62
VAT1-203ENST00000587062 CHAF1AQ13111 956 aaPredicted RBP25.14■■□□□ 1.62
VAT1-203ENST00000587062 CYP4F22Q6NT55 531 aa25.14■■□□□ 1.62
VAT1-203ENST00000587062 MAP2K2P36507 400 aa25.13■■□□□ 1.61
VAT1-203ENST00000587062 CFAP100Q494V2 611 aa25.13■■□□□ 1.61
VAT1-203ENST00000587062 SERPINA10Q9UK55 444 aa25.13■■□□□ 1.61
VAT1-203ENST00000587062 TTF2Q9UNY4 1162 aaKnown RBP25.13■■□□□ 1.61
VAT1-203ENST00000587062 PA2G4Q9UQ80 394 aaKnown RBP25.13■■□□□ 1.61
VAT1-203ENST00000587062 TNNQ9UQP3 1299 aa25.13■■□□□ 1.61
VAT1-203ENST00000587062 ZNF646O15015 1829 aaPredicted RBP25.13■■□□□ 1.61
VAT1-203ENST00000587062 G3BP1Q13283 466 aaKnown RBP eCLIP25.12■■□□□ 1.618e-7■□□□□ 10.5
VAT1-203ENST00000587062 IQSEC3Q9UPP2 1182 aaPredicted RBP25.12■■□□□ 1.61
VAT1-203ENST00000587062 SUGT1Q9Y2Z0 365 aa25.12■■□□□ 1.61
VAT1-203ENST00000587062 MAST3O60307 1309 aa25.12■■□□□ 1.61
VAT1-203ENST00000587062 WDR66Q8TBY9 1149 aa25.11■■□□□ 1.61
VAT1-203ENST00000587062 CCDC102AQ96A19 550 aa25.11■■□□□ 1.61
VAT1-203ENST00000587062 ZBED3Q96IU2 234 aaPredicted RBP25.11■■□□□ 1.61
VAT1-203ENST00000587062 RGMBQ6NW40 437 aa25.1■■□□□ 1.61
VAT1-203ENST00000587062 PPP2R3BQ9Y5P8 575 aa25.1■■□□□ 1.61
VAT1-203ENST00000587062 SPDYE2BA6NHP3 402 aa25.09■■□□□ 1.61
VAT1-203ENST00000587062 SPDYE6P0CI01 402 aa25.09■■□□□ 1.61
VAT1-203ENST00000587062 HDLBPQ00341 1268 aaKnown RBP25.09■■□□□ 1.61
VAT1-203ENST00000587062 NOGQ13253 232 aa25.09■■□□□ 1.61
VAT1-203ENST00000587062 TNFAIP1Q13829 316 aa25.09■■□□□ 1.61
VAT1-203ENST00000587062 TTLL12Q14166 644 aaPredicted RBP25.09■■□□□ 1.61
VAT1-203ENST00000587062 DLK2Q6UY11 383 aa25.09■■□□□ 1.61
VAT1-203ENST00000587062 CHMP4BQ9H444 224 aaKnown RBP25.09■■□□□ 1.61
VAT1-203ENST00000587062 SEMA3EO15041 775 aa25.08■■□□□ 1.61
VAT1-203ENST00000587062 COL1A1P02452 1464 aaPredicted RBP25.08■■□□□ 1.6
VAT1-203ENST00000587062 ZNF157P51786 506 aaPredicted RBP25.07■■□□□ 1.6
VAT1-203ENST00000587062 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.07■■□□□ 1.6
VAT1-203ENST00000587062 MRIQ9BWK5 157 aa25.07■■□□□ 1.6
VAT1-203ENST00000587062 WBP1LQ9NX94 342 aa25.07■■□□□ 1.6
VAT1-203ENST00000587062 RCAN3Q9UKA8 241 aa25.07■■□□□ 1.6
VAT1-203ENST00000587062 DENND2AQ9ULE3 1009 aa25.07■■□□□ 1.6
VAT1-203ENST00000587062 CTCFP49711 727 aaPredicted RBP25.06■■□□□ 1.6
VAT1-203ENST00000587062 ATP8B2P98198 1209 aa25.06■■□□□ 1.6
VAT1-203ENST00000587062 OS9Q13438 667 aaPredicted RBP25.06■■□□□ 1.6
VAT1-203ENST00000587062 ARMC9Q7Z3E5 817 aa25.06■■□□□ 1.6
VAT1-203ENST00000587062 TEKT1Q969V4 418 aa25.06■■□□□ 1.6
VAT1-203ENST00000587062 PRMT6Q96LA8 375 aaPredicted RBP25.06■■□□□ 1.6
VAT1-203ENST00000587062 DEFB129Q9H1M3 183 aa25.06■■□□□ 1.6
VAT1-203ENST00000587062 VEZTQ9HBM0 779 aa25.06■■□□□ 1.6
VAT1-203ENST00000587062 ZBTB7BO15156 539 aaPredicted RBP25.05■■□□□ 1.6
VAT1-203ENST00000587062 CRKP46108 304 aa25.05■■□□□ 1.6
VAT1-203ENST00000587062 TNNI2P48788 182 aa25.05■■□□□ 1.6
VAT1-203ENST00000587062 MVPQ14764 893 aaKnown RBP25.05■■□□□ 1.6
VAT1-203ENST00000587062 SUPT20HL1Q3ZLR7 823 aa25.05■■□□□ 1.6
VAT1-203ENST00000587062 GORABQ5T7V8 394 aa25.05■■□□□ 1.6
VAT1-203ENST00000587062 ZGPATQ8N5A5 531 aaKnown RBP25.05■■□□□ 1.6
VAT1-203ENST00000587062 PNMA6EA0A0J9YXQ4 647 aa25.04■■□□□ 1.6
VAT1-203ENST00000587062 TFCP2Q12800 502 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms