RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 MYH13Q9UKX3 1938 aa16.49■□□□□ 0.23
SMARCA4-210ENST00000586892 TMEM88BA6NKF7 163 aa16.49■□□□□ 0.23
SMARCA4-210ENST00000586892 HTRA3P83110 453 aa16.49■□□□□ 0.23
SMARCA4-210ENST00000586892 ATP8B2P98198 1209 aa16.49■□□□□ 0.23
SMARCA4-210ENST00000586892 PDE3AQ14432 1141 aa16.49■□□□□ 0.23
SMARCA4-210ENST00000586892 KIAA0825Q8IV33 1275 aa16.49■□□□□ 0.23
SMARCA4-210ENST00000586892 CERS5Q8N5B7 392 aa16.49■□□□□ 0.23
SMARCA4-210ENST00000586892 SSH3Q8TE77 659 aa16.49■□□□□ 0.23
SMARCA4-210ENST00000586892 CHMP4BQ9H444 224 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-210ENST00000586892 C1orf115Q9H7X2 142 aa16.49■□□□□ 0.23
SMARCA4-210ENST00000586892 FRAT2O75474 233 aaPredicted RBP16.48■□□□□ 0.23
SMARCA4-210ENST00000586892 BCAMP50895 628 aa16.48■□□□□ 0.23
SMARCA4-210ENST00000586892 POLA2Q14181 598 aa16.48■□□□□ 0.23
SMARCA4-210ENST00000586892 DNAJC5GQ8N7S2 189 aa16.48■□□□□ 0.23
SMARCA4-210ENST00000586892 DCPSQ96C86 337 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-210ENST00000586892 AKAP2Q9Y2D5 859 aa16.48■□□□□ 0.23
SMARCA4-210ENST00000586892 TRAF5O00463 557 aa16.47■□□□□ 0.23
SMARCA4-210ENST00000586892 G3BP1Q13283 466 aaKnown RBP eCLIP16.47■□□□□ 0.23
SMARCA4-210ENST00000586892 SCARF1Q14162 830 aa16.47■□□□□ 0.23
SMARCA4-210ENST00000586892 MFSD14BQ5SR56 506 aa16.47■□□□□ 0.23
SMARCA4-210ENST00000586892 GLIS2Q9BZE0 524 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-210ENST00000586892 GGA3Q9NZ52 723 aa16.47■□□□□ 0.23
SMARCA4-210ENST00000586892 JAG2Q9Y219 1238 aa16.47■□□□□ 0.23
SMARCA4-210ENST00000586892 COG6Q9Y2V7 657 aa16.47■□□□□ 0.23
SMARCA4-210ENST00000586892 PITPNM2Q9BZ72 1349 aa16.46■□□□□ 0.23
SMARCA4-210ENST00000586892 TFCP2Q12800 502 aa16.46■□□□□ 0.23
SMARCA4-210ENST00000586892 KRT26Q7Z3Y9 468 aa16.46■□□□□ 0.23
SMARCA4-210ENST00000586892 SULF1Q8IWU6 871 aa16.46■□□□□ 0.23
SMARCA4-210ENST00000586892 TBC1D22AQ8WUA7 517 aa16.46■□□□□ 0.23
SMARCA4-210ENST00000586892 IQSEC3Q9UPP2 1182 aaPredicted RBP16.46■□□□□ 0.23
SMARCA4-210ENST00000586892 WNT10BO00744 389 aa16.45■□□□□ 0.22
SMARCA4-210ENST00000586892 ANGEL2Q5VTE6 544 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-210ENST00000586892 CEP85Q6P2H3 762 aa16.45■□□□□ 0.22
SMARCA4-210ENST00000586892 USP48Q86UV5 1035 aa16.45■□□□□ 0.22
SMARCA4-210ENST00000586892 MTMR14Q8NCE2 650 aa16.45■□□□□ 0.22
SMARCA4-210ENST00000586892 KLRG1Q96E93 195 aa16.45■□□□□ 0.22
SMARCA4-210ENST00000586892 ZBTB40Q9NUA8 1239 aa16.45■□□□□ 0.22
SMARCA4-210ENST00000586892 GNL3LQ9NVN8 582 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-210ENST00000586892 ECM29Q5VYK3 1845 aa16.45■□□□□ 0.22
SMARCA4-210ENST00000586892 A0A1B0GUL7 405 aa16.44■□□□□ 0.22
SMARCA4-210ENST00000586892 F8W031 263 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-210ENST00000586892 ZBTB22O15209 634 aa16.44■□□□□ 0.22
SMARCA4-210ENST00000586892 FMR1Q06787 632 aaKnown RBP eCLIP16.44■□□□□ 0.226e-9■■■■□ 25.9
SMARCA4-210ENST00000586892 CHAF1AQ13111 956 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-210ENST00000586892 NBPF9Q3BBW0 867 aa16.44■□□□□ 0.22
SMARCA4-210ENST00000586892 ASTN2O75129 1339 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-210ENST00000586892 SEMA3EO15041 775 aa16.43■□□□□ 0.22
SMARCA4-210ENST00000586892 SURF6O75683 361 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-210ENST00000586892 CELF2O95319 508 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-210ENST00000586892 TIMM10P62072 90 aa16.43■□□□□ 0.22
SMARCA4-210ENST00000586892 OS9Q13438 667 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-210ENST00000586892 DLGAP5Q15398 846 aa16.43■□□□□ 0.22
SMARCA4-210ENST00000586892 C20orf194Q5TEA3 1177 aa16.43■□□□□ 0.22
SMARCA4-210ENST00000586892 CST9Q5W186 159 aa16.43■□□□□ 0.22
SMARCA4-210ENST00000586892 WDR66Q8TBY9 1149 aa16.43■□□□□ 0.22
SMARCA4-210ENST00000586892 ZBED3Q96IU2 234 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-210ENST00000586892 NOP58Q9Y2X3 529 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-210ENST00000586892 SUGT1Q9Y2Z0 365 aa16.43■□□□□ 0.22
SMARCA4-210ENST00000586892 ADM5C9JUS6 153 aa16.42■□□□□ 0.22
SMARCA4-210ENST00000586892 ADORA1P30542 326 aa16.42■□□□□ 0.22
SMARCA4-210ENST00000586892 CFAP100Q494V2 611 aa16.42■□□□□ 0.22
SMARCA4-210ENST00000586892 CCDC102BQ68D86 513 aa16.42■□□□□ 0.22
SMARCA4-210ENST00000586892 RPAP2Q8IXW5 612 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-210ENST00000586892 SERPINA10Q9UK55 444 aa16.42■□□□□ 0.22
SMARCA4-210ENST00000586892 ABT1Q9ULW3 272 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-210ENST00000586892 TTF2Q9UNY4 1162 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-210ENST00000586892 CNTNAP1P78357 1384 aa16.41■□□□□ 0.22
SMARCA4-210ENST00000586892 MYO1BO43795 1136 aa16.41■□□□□ 0.22
SMARCA4-210ENST00000586892 PHKA1P46020 1223 aa16.41■□□□□ 0.22
SMARCA4-210ENST00000586892 XAGE2Q96GT9 111 aa16.41■□□□□ 0.22
SMARCA4-210ENST00000586892 NEUROD6Q96NK8 337 aa16.41■□□□□ 0.22
SMARCA4-210ENST00000586892 ZNF408Q9H9D4 720 aa16.41■□□□□ 0.22
SMARCA4-210ENST00000586892 GPR108Q9NPR9 543 aa16.41■□□□□ 0.22
SMARCA4-210ENST00000586892 DENND2AQ9ULE3 1009 aa16.41■□□□□ 0.22
SMARCA4-210ENST00000586892 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-210ENST00000586892 COL1A1P02452 1464 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-210ENST00000586892 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
SMARCA4-210ENST00000586892 RASSF10A6NK89 507 aa16.4■□□□□ 0.22
SMARCA4-210ENST00000586892 HMMRO75330 724 aa16.4■□□□□ 0.22
SMARCA4-210ENST00000586892 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
SMARCA4-210ENST00000586892 RBM5P52756 815 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMARCA4-210ENST00000586892 HDLBPQ00341 1268 aaKnown RBP16.4■□□□□ 0.22
SMARCA4-210ENST00000586892 APOBEC3FQ8IUX4 373 aaKnown RBP16.4■□□□□ 0.22
SMARCA4-210ENST00000586892 MKRN1Q9UHC7 482 aaKnown RBP16.4■□□□□ 0.22
SMARCA4-210ENST00000586892 TLL2Q9Y6L7 1015 aa16.4■□□□□ 0.22
SMARCA4-210ENST00000586892 MAST3O60307 1309 aa16.4■□□□□ 0.22
SMARCA4-210ENST00000586892 PDS5AQ29RF7 1337 aaKnown RBP16.4■□□□□ 0.22
SMARCA4-210ENST00000586892 RRP1P56182 461 aaKnown RBP16.39■□□□□ 0.21
SMARCA4-210ENST00000586892 DEFB115Q30KQ5 88 aa16.39■□□□□ 0.21
SMARCA4-210ENST00000586892 HSP90AB4PQ58FF6 505 aa16.39■□□□□ 0.21
SMARCA4-210ENST00000586892 GORABQ5T7V8 394 aa16.39■□□□□ 0.21
SMARCA4-210ENST00000586892 ERC1Q8IUD2 1116 aa16.39■□□□□ 0.21
SMARCA4-210ENST00000586892 JMYQ8N9B5 988 aa16.39■□□□□ 0.21
SMARCA4-210ENST00000586892 SALL1Q9NSC2 1324 aa16.39■□□□□ 0.21
SMARCA4-210ENST00000586892 CRKP46108 304 aa16.38■□□□□ 0.21
SMARCA4-210ENST00000586892 GRIK5Q16478 980 aa16.38■□□□□ 0.21
SMARCA4-210ENST00000586892 TNNI3KQ59H18 835 aa16.38■□□□□ 0.21
SMARCA4-210ENST00000586892 DLK2Q6UY11 383 aa16.38■□□□□ 0.21
SMARCA4-210ENST00000586892 SAPCD2Q86UD0 394 aa16.38■□□□□ 0.21
SMARCA4-210ENST00000586892 TEKT1Q969V4 418 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms