RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 AGBL3Q8NEM8 1001 aa28.7■■■□□ 2.18
LSM7-202ENST00000585395 ZIC5Q96T25 663 aa28.7■■■□□ 2.18
LSM7-202ENST00000585395 SNAP23O00161 211 aa28.69■■■□□ 2.18
LSM7-202ENST00000585395 MTX1Q13505 466 aa28.69■■■□□ 2.18
LSM7-202ENST00000585395 PUS3Q9BZE2 481 aaKnown RBP28.69■■■□□ 2.18
LSM7-202ENST00000585395 FBXO3Q9UK99 471 aa28.69■■■□□ 2.18
LSM7-202ENST00000585395 MROH5Q6ZUA9 1318 aa28.69■■■□□ 2.18
LSM7-202ENST00000585395 METTL24Q5JXM2 366 aa28.68■■■□□ 2.18
LSM7-202ENST00000585395 SRGAP3O43295 1099 aa28.67■■■□□ 2.18
LSM7-202ENST00000585395 KIF4BQ2VIQ3 1234 aa28.67■■■□□ 2.18
LSM7-202ENST00000585395 RGMBQ6NW40 437 aa28.67■■■□□ 2.18
LSM7-202ENST00000585395 USP48Q86UV5 1035 aa28.67■■■□□ 2.18
LSM7-202ENST00000585395 C20orf194Q5TEA3 1177 aa28.66■■■□□ 2.18
LSM7-202ENST00000585395 STRIP1Q5VSL9 837 aa28.66■■■□□ 2.18
LSM7-202ENST00000585395 CCDC102AQ96A19 550 aa28.66■■■□□ 2.18
LSM7-202ENST00000585395 MYO3BQ8WXR4 1341 aa28.66■■■□□ 2.18
LSM7-202ENST00000585395 USP17L8P0C7I0 530 aa28.65■■■□□ 2.18
LSM7-202ENST00000585395 TTLL5Q6EMB2 1281 aa28.65■■■□□ 2.18
LSM7-202ENST00000585395 KLHDC4Q8TBB5 520 aa28.65■■■□□ 2.18
LSM7-202ENST00000585395 CD209Q9NNX6 404 aa28.65■■■□□ 2.18
LSM7-202ENST00000585395 FAM155AB1AL88 458 aaPredicted RBP28.64■■■□□ 2.18
LSM7-202ENST00000585395 SOX10P56693 466 aa28.64■■■□□ 2.18
LSM7-202ENST00000585395 GTF2IP78347 998 aa28.64■■■□□ 2.18
LSM7-202ENST00000585395 UBE4AQ14139 1066 aa28.64■■■□□ 2.18
LSM7-202ENST00000585395 LRRC24Q50LG9 513 aa28.64■■■□□ 2.18
LSM7-202ENST00000585395 C15orf52Q6ZUT6 534 aaKnown RBP28.64■■■□□ 2.18
LSM7-202ENST00000585395 OGFOD1Q8N543 542 aa28.64■■■□□ 2.18
LSM7-202ENST00000585395 C2orf69Q8N8R5 385 aa28.63■■■□□ 2.17
LSM7-202ENST00000585395 DCPSQ96C86 337 aaKnown RBP28.63■■■□□ 2.17
LSM7-202ENST00000585395 RIPOR2Q9Y4F9 1068 aa28.63■■■□□ 2.17
LSM7-202ENST00000585395 ZNF609O15014 1411 aa28.62■■■□□ 2.17
LSM7-202ENST00000585395 EYA2O00167 538 aa28.62■■■□□ 2.17
LSM7-202ENST00000585395 RFX5P48382 616 aaPredicted RBP28.62■■■□□ 2.17
LSM7-202ENST00000585395 ATP8B2P98198 1209 aa28.62■■■□□ 2.17
LSM7-202ENST00000585395 DACT2Q5SW24 774 aa28.62■■■□□ 2.17
LSM7-202ENST00000585395 VPS37DQ86XT2 251 aa28.62■■■□□ 2.17
LSM7-202ENST00000585395 MXD3Q9BW11 206 aa28.62■■■□□ 2.17
LSM7-202ENST00000585395 GBA2Q9HCG7 927 aaPredicted RBP28.62■■■□□ 2.17
LSM7-202ENST00000585395 COPRSQ9NQ92 184 aa28.62■■■□□ 2.17
LSM7-202ENST00000585395 ZBTB40Q9NUA8 1239 aa28.62■■■□□ 2.17
LSM7-202ENST00000585395 CIAO1O76071 339 aa28.61■■■□□ 2.17
LSM7-202ENST00000585395 PTPN12Q05209 780 aaKnown RBP28.61■■■□□ 2.17
LSM7-202ENST00000585395 PRPF38BQ5VTL8 546 aaKnown RBP28.61■■■□□ 2.17
LSM7-202ENST00000585395 KRT26Q7Z3Y9 468 aa28.61■■■□□ 2.17
LSM7-202ENST00000585395 C1orf115Q9H7X2 142 aa28.61■■■□□ 2.17
LSM7-202ENST00000585395 HDAC9Q9UKV0 1011 aa28.61■■■□□ 2.17
LSM7-202ENST00000585395 KIF23Q02241 960 aaPredicted RBP28.6■■■□□ 2.17
LSM7-202ENST00000585395 RPAP2Q8IXW5 612 aaPredicted RBP28.6■■■□□ 2.17
LSM7-202ENST00000585395 SIL1Q9H173 461 aa28.6■■■□□ 2.17
LSM7-202ENST00000585395 MYOZ2Q9NPC6 264 aa28.6■■■□□ 2.17
LSM7-202ENST00000585395 SUPT16HQ9Y5B9 1047 aaKnown RBP28.6■■■□□ 2.17
LSM7-202ENST00000585395 HMMRO75330 724 aa28.59■■■□□ 2.17
LSM7-202ENST00000585395 EGFRP00533 1210 aa28.59■■■□□ 2.17
LSM7-202ENST00000585395 ZNF280AP59817 542 aaPredicted RBP28.59■■■□□ 2.17
LSM7-202ENST00000585395 RNF186Q9NXI6 227 aa28.59■■■□□ 2.17
LSM7-202ENST00000585395 TRPA1O75762 1119 aa28.58■■■□□ 2.17
LSM7-202ENST00000585395 HIBADHP31937 336 aaKnown RBP28.58■■■□□ 2.17
LSM7-202ENST00000585395 IL15P40933 162 aaPredicted RBP28.58■■■□□ 2.17
LSM7-202ENST00000585395 ZNF157P51786 506 aaPredicted RBP28.58■■■□□ 2.17
LSM7-202ENST00000585395 GMLQ99445 158 aa28.58■■■□□ 2.17
LSM7-202ENST00000585395 GGA3Q9NZ52 723 aa28.58■■■□□ 2.17
LSM7-202ENST00000585395 AKAP11Q9UKA4 1901 aa28.58■■■□□ 2.17
LSM7-202ENST00000585395 POLR2AP24928 1970 aaKnown RBP28.57■■■□□ 2.16
LSM7-202ENST00000585395 FRAT2O75474 233 aaPredicted RBP28.57■■■□□ 2.16
LSM7-202ENST00000585395 PDE8BO95263 885 aa28.57■■■□□ 2.16
LSM7-202ENST00000585395 GYG1P46976 350 aa28.57■■■□□ 2.16
LSM7-202ENST00000585395 AAMPQ13685 434 aa28.57■■■□□ 2.16
LSM7-202ENST00000585395 CAVIN4Q5BKX8 364 aa28.57■■■□□ 2.16
LSM7-202ENST00000585395 DLK2Q6UY11 383 aa28.57■■■□□ 2.16
LSM7-202ENST00000585395 KIAA0825Q8IV33 1275 aa28.57■■■□□ 2.16
LSM7-202ENST00000585395 SULF1Q8IWU6 871 aa28.57■■■□□ 2.16
LSM7-202ENST00000585395 IRS2Q9Y4H2 1338 aa28.57■■■□□ 2.16
LSM7-202ENST00000585395 IFIT1P09914 478 aaKnown RBP28.56■■■□□ 2.16
LSM7-202ENST00000585395 IL1R1P14778 569 aa28.56■■■□□ 2.16
LSM7-202ENST00000585395 G3BP1Q13283 466 aaKnown RBP eCLIP28.56■■■□□ 2.16
LSM7-202ENST00000585395 CEP85Q6P2H3 762 aa28.56■■■□□ 2.16
LSM7-202ENST00000585395 CTU1Q7Z7A3 348 aaKnown RBP28.56■■■□□ 2.16
LSM7-202ENST00000585395 SSH3Q8TE77 659 aa28.56■■■□□ 2.16
LSM7-202ENST00000585395 JAG2Q9Y219 1238 aa28.56■■■□□ 2.16
LSM7-202ENST00000585395 ZNF646O15015 1829 aaPredicted RBP28.55■■■□□ 2.16
LSM7-202ENST00000585395 PNMA6EA0A0J9YXQ4 647 aa28.55■■■□□ 2.16
LSM7-202ENST00000585395 SCARF1Q14162 830 aa28.55■■■□□ 2.16
LSM7-202ENST00000585395 POLA2Q14181 598 aa28.55■■■□□ 2.16
LSM7-202ENST00000585395 PUM3Q15397 648 aaKnown RBP28.55■■■□□ 2.16
LSM7-202ENST00000585395 CEP126Q9P2H0 1117 aa28.55■■■□□ 2.16
LSM7-202ENST00000585395 CENPBP07199 599 aaPredicted RBP28.54■■■□□ 2.16
LSM7-202ENST00000585395 REM2Q8IYK8 340 aaPredicted RBP28.54■■■□□ 2.16
LSM7-202ENST00000585395 SLC10A3P09131 477 aa28.53■■■□□ 2.16
LSM7-202ENST00000585395 SLC5A1P13866 664 aa28.53■■■□□ 2.16
LSM7-202ENST00000585395 MMP14P50281 582 aa28.53■■■□□ 2.16
LSM7-202ENST00000585395 ANGEL2Q5VTE6 544 aaKnown RBP28.53■■■□□ 2.16
LSM7-202ENST00000585395 FAM84BQ96KN1 310 aaPredicted RBP28.53■■■□□ 2.16
LSM7-202ENST00000585395 PA2G4Q9UQ80 394 aaKnown RBP28.53■■■□□ 2.16
LSM7-202ENST00000585395 F8W031 263 aaPredicted RBP28.52■■■□□ 2.16
LSM7-202ENST00000585395 OS9Q13438 667 aaPredicted RBP28.52■■■□□ 2.16
LSM7-202ENST00000585395 HSP90AB4PQ58FF6 505 aa28.52■■■□□ 2.16
LSM7-202ENST00000585395 CSRNP1Q96S65 589 aa28.52■■■□□ 2.16
LSM7-202ENST00000585395 CRBNQ96SW2 442 aa28.52■■■□□ 2.16
LSM7-202ENST00000585395 ADM5C9JUS6 153 aa28.51■■■□□ 2.15
LSM7-202ENST00000585395 VGLL2Q8N8G2 317 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms