RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 DBNDD2Q9BQY9 259 aa17.42■□□□□ 0.38
MKS1-213ENST00000585134 CCDC8Q9H0W5 538 aaPredicted RBP17.42■□□□□ 0.38
MKS1-213ENST00000585134 TLR7Q9NYK1 1049 aaKnown RBP17.42■□□□□ 0.38
MKS1-213ENST00000585134 CNOT7Q9UIV1 285 aaKnown RBP17.42■□□□□ 0.38
MKS1-213ENST00000585134 F8W031 263 aaPredicted RBP17.41■□□□□ 0.38
MKS1-213ENST00000585134 CENPBP07199 599 aaPredicted RBP17.41■□□□□ 0.38
MKS1-213ENST00000585134 POTEIP0CG38 1075 aa17.41■□□□□ 0.38
MKS1-213ENST00000585134 POTEJP0CG39 1038 aa17.41■□□□□ 0.38
MKS1-213ENST00000585134 TBC1D10BQ4KMP7 808 aaPredicted RBP17.41■□□□□ 0.38
MKS1-213ENST00000585134 RBM26Q5T8P6 1007 aaKnown RBP17.41■□□□□ 0.38
MKS1-213ENST00000585134 CCDC102BQ68D86 513 aa17.41■□□□□ 0.38
MKS1-213ENST00000585134 AACSQ86V21 672 aa17.41■□□□□ 0.38
MKS1-213ENST00000585134 KIAA0825Q8IV33 1275 aa17.41■□□□□ 0.38
MKS1-213ENST00000585134 CERS5Q8N5B7 392 aa17.41■□□□□ 0.38
MKS1-213ENST00000585134 TRPM4Q8TD43 1214 aa17.41■□□□□ 0.38
MKS1-213ENST00000585134 KIF1BPQ96EK5 621 aa17.41■□□□□ 0.38
MKS1-213ENST00000585134 GPR108Q9NPR9 543 aa17.41■□□□□ 0.38
MKS1-213ENST00000585134 ADARB2Q9NS39 739 aaKnown RBP17.41■□□□□ 0.38
MKS1-213ENST00000585134 GNL3LQ9NVN8 582 aaKnown RBP17.41■□□□□ 0.38
MKS1-213ENST00000585134 CLEC11AQ9Y240 323 aa17.41■□□□□ 0.38
MKS1-213ENST00000585134 FAM205AQ6ZU69 1335 aa17.41■□□□□ 0.38
MKS1-213ENST00000585134 MYO3BQ8WXR4 1341 aa17.41■□□□□ 0.38
MKS1-213ENST00000585134 H7C1D1 291 aa17.4■□□□□ 0.38
MKS1-213ENST00000585134 RAB11FIP3O75154 756 aa17.4■□□□□ 0.38
MKS1-213ENST00000585134 MFSD14BQ5SR56 506 aa17.4■□□□□ 0.38
MKS1-213ENST00000585134 AGBL3Q8NEM8 1001 aa17.4■□□□□ 0.38
MKS1-213ENST00000585134 DPF2Q92785 391 aa17.4■□□□□ 0.38
MKS1-213ENST00000585134 SMARCA5O60264 1052 aaPredicted RBP17.39■□□□□ 0.37
MKS1-213ENST00000585134 KIF4BQ2VIQ3 1234 aa17.39■□□□□ 0.37
MKS1-213ENST00000585134 TTC39AQ5SRH9 613 aa17.39■□□□□ 0.37
MKS1-213ENST00000585134 SAMD7Q7Z3H4 446 aa17.39■□□□□ 0.37
MKS1-213ENST00000585134 EAF2Q96CJ1 260 aaPredicted RBP17.39■□□□□ 0.37
MKS1-213ENST00000585134 GMLQ99445 158 aa17.39■□□□□ 0.37
MKS1-213ENST00000585134 USP17L8P0C7I0 530 aa17.38■□□□□ 0.37
MKS1-213ENST00000585134 RASGRF1Q13972 1273 aa17.38■□□□□ 0.37
MKS1-213ENST00000585134 CLASRPQ8N2M8 674 aaKnown RBP17.38■□□□□ 0.37
MKS1-213ENST00000585134 DBNLQ9UJU6 430 aaKnown RBP17.38■□□□□ 0.37
MKS1-213ENST00000585134 EGFRP00533 1210 aa17.37■□□□□ 0.37
MKS1-213ENST00000585134 AAMPQ13685 434 aa17.37■□□□□ 0.37
MKS1-213ENST00000585134 LDHDQ86WU2 507 aa17.37■□□□□ 0.37
MKS1-213ENST00000585134 LRRCC1Q9C099 1032 aa17.37■□□□□ 0.37
MKS1-213ENST00000585134 DCTPP1Q9H773 170 aa17.37■□□□□ 0.37
MKS1-213ENST00000585134 HDAC9Q9UKV0 1011 aa17.37■□□□□ 0.37
MKS1-213ENST00000585134 DENND2AQ9ULE3 1009 aa17.37■□□□□ 0.37
MKS1-213ENST00000585134 ADAMTSL1Q8N6G6 1762 aa17.37■□□□□ 0.37
MKS1-213ENST00000585134 SEMA3EO15041 775 aa17.36■□□□□ 0.37
MKS1-213ENST00000585134 TOMM70O94826 608 aa17.36■□□□□ 0.37
MKS1-213ENST00000585134 IFIT2P09913 472 aaKnown RBP17.36■□□□□ 0.37
MKS1-213ENST00000585134 FKBP1AP62942 108 aaKnown RBP17.36■□□□□ 0.37
MKS1-213ENST00000585134 GRIK5Q16478 980 aa17.36■□□□□ 0.37
MKS1-213ENST00000585134 CCDC158Q5M9N0 1113 aa17.36■□□□□ 0.37
MKS1-213ENST00000585134 PI16Q6UXB8 463 aa17.36■□□□□ 0.37
MKS1-213ENST00000585134 USP50Q70EL3 339 aaPredicted RBP17.36■□□□□ 0.37
MKS1-213ENST00000585134 PNMA8AQ86V59 439 aaPredicted RBP17.36■□□□□ 0.37
MKS1-213ENST00000585134 OGFOD1Q8N543 542 aa17.36■□□□□ 0.37
MKS1-213ENST00000585134 RBM46Q8TBY0 533 aaKnown RBP17.36■□□□□ 0.37
MKS1-213ENST00000585134 TBC1D22AQ8WUA7 517 aa17.36■□□□□ 0.37
MKS1-213ENST00000585134 MYOZ2Q9NPC6 264 aa17.36■□□□□ 0.37
MKS1-213ENST00000585134 UQCRFS1P1P0C7P4 283 aa17.35■□□□□ 0.37
MKS1-213ENST00000585134 ZNF280AP59817 542 aaPredicted RBP17.35■□□□□ 0.37
MKS1-213ENST00000585134 SCARF1Q14162 830 aa17.35■□□□□ 0.37
MKS1-213ENST00000585134 SMC1BQ8NDV3 1235 aa17.35■□□□□ 0.37
MKS1-213ENST00000585134 WDR66Q8TBY9 1149 aa17.35■□□□□ 0.37
MKS1-213ENST00000585134 SNRKQ9NRH2 765 aa17.35■□□□□ 0.37
MKS1-213ENST00000585134 TTF2Q9UNY4 1162 aaKnown RBP17.35■□□□□ 0.37
MKS1-213ENST00000585134 ASTN2O75129 1339 aaPredicted RBP17.34■□□□□ 0.37
MKS1-213ENST00000585134 ARID4AP29374 1257 aaPredicted RBP17.34■□□□□ 0.37
MKS1-213ENST00000585134 HIRAP54198 1017 aaPredicted RBP17.34■□□□□ 0.37
MKS1-213ENST00000585134 HDAC1Q13547 482 aaPredicted RBP17.34■□□□□ 0.37
MKS1-213ENST00000585134 CHADLQ6NUI6 762 aa17.34■□□□□ 0.37
MKS1-213ENST00000585134 HMG20BQ9P0W2 317 aa17.34■□□□□ 0.37
MKS1-213ENST00000585134 MCAMP43121 646 aa17.33■□□□□ 0.36
MKS1-213ENST00000585134 RBM5P52756 815 aaKnown RBP eCLIP17.33■□□□□ 0.36
MKS1-213ENST00000585134 CFAP100Q494V2 611 aa17.33■□□□□ 0.36
MKS1-213ENST00000585134 MAP1SQ66K74 1059 aaPredicted RBP17.33■□□□□ 0.36
MKS1-213ENST00000585134 RWDD1Q9H446 243 aaPredicted RBP17.33■□□□□ 0.36
MKS1-213ENST00000585134 GGA3Q9NZ52 723 aa17.33■□□□□ 0.36
MKS1-213ENST00000585134 ABCF2Q9UG63 623 aa17.33■□□□□ 0.36
MKS1-213ENST00000585134 PCDHAC2Q9Y5I4 1007 aa17.33■□□□□ 0.36
MKS1-213ENST00000585134 PRDX5P30044 214 aa17.32■□□□□ 0.36
MKS1-213ENST00000585134 SPATA5Q8NB90 893 aa17.32■□□□□ 0.36
MKS1-213ENST00000585134 ZBTB47Q9UFB7 747 aaPredicted RBP17.32■□□□□ 0.36
MKS1-213ENST00000585134 IGHDP01880 384 aa17.31■□□□□ 0.36
MKS1-213ENST00000585134 LDHBP07195 334 aaKnown RBP17.31■□□□□ 0.36
MKS1-213ENST00000585134 NEFLP07196 543 aa17.31■□□□□ 0.36
MKS1-213ENST00000585134 ZAP70P43403 619 aa17.31■□□□□ 0.36
MKS1-213ENST00000585134 C1QTNF8P60827 252 aa17.31■□□□□ 0.36
MKS1-213ENST00000585134 DLGAP5Q15398 846 aa17.31■□□□□ 0.36
MKS1-213ENST00000585134 ANKRD45Q5TZF3 282 aa17.31■□□□□ 0.36
MKS1-213ENST00000585134 NDUFB9Q9Y6M9 179 aa17.31■□□□□ 0.36
MKS1-213ENST00000585134 MAST3O60307 1309 aa17.3■□□□□ 0.36
MKS1-213ENST00000585134 PDS5AQ29RF7 1337 aaKnown RBP17.3■□□□□ 0.36
MKS1-213ENST00000585134 SALL1Q9NSC2 1324 aa17.3■□□□□ 0.36
MKS1-213ENST00000585134 CRKP46108 304 aa17.3■□□□□ 0.36
MKS1-213ENST00000585134 FSTL1Q12841 308 aa17.3■□□□□ 0.36
MKS1-213ENST00000585134 NBPF9Q3BBW0 867 aa17.3■□□□□ 0.36
MKS1-213ENST00000585134 TBC1D9Q6ZT07 1266 aa17.3■□□□□ 0.36
MKS1-213ENST00000585134 DZIP1Q86YF9 867 aaKnown RBP17.3■□□□□ 0.36
MKS1-213ENST00000585134 GCC1Q96CN9 775 aa17.3■□□□□ 0.36
MKS1-213ENST00000585134 WNT10BO00744 389 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms