RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 TDRD7Q8NHU6 1098 aaKnown RBP22.36■■□□□ 1.17
SRSF1-209ENST00000585096 KLHDC4Q8TBB5 520 aa22.36■■□□□ 1.17
SRSF1-209ENST00000585096 FAM84BQ96KN1 310 aaPredicted RBP22.36■■□□□ 1.17
SRSF1-209ENST00000585096 FKBP1BP68106 108 aa22.35■■□□□ 1.17
SRSF1-209ENST00000585096 DLGAP5Q15398 846 aa22.35■■□□□ 1.17
SRSF1-209ENST00000585096 CAVIN4Q5BKX8 364 aa22.35■■□□□ 1.17
SRSF1-209ENST00000585096 RGMBQ6NW40 437 aa22.35■■□□□ 1.17
SRSF1-209ENST00000585096 PRDM10Q9NQV6 1147 aa22.35■■□□□ 1.17
SRSF1-209ENST00000585096 FAM205AQ6ZU69 1335 aa22.34■■□□□ 1.17
SRSF1-209ENST00000585096 EYA2O00167 538 aa22.34■■□□□ 1.17
SRSF1-209ENST00000585096 RFX5P48382 616 aaPredicted RBP22.34■■□□□ 1.17
SRSF1-209ENST00000585096 NOGQ13253 232 aa22.34■■□□□ 1.17
SRSF1-209ENST00000585096 INTS3Q68E01 1043 aaKnown RBP22.34■■□□□ 1.17
SRSF1-209ENST00000585096 APOBEC3FQ8IUX4 373 aaKnown RBP22.34■■□□□ 1.17
SRSF1-209ENST00000585096 TNS4Q8IZW8 715 aa22.34■■□□□ 1.17
SRSF1-209ENST00000585096 CCDC102AQ96A19 550 aa22.34■■□□□ 1.17
SRSF1-209ENST00000585096 JAG2Q9Y219 1238 aa22.34■■□□□ 1.17
SRSF1-209ENST00000585096 F8W031 263 aaPredicted RBP22.33■■□□□ 1.17
SRSF1-209ENST00000585096 VGLL2Q8N8G2 317 aa22.33■■□□□ 1.17
SRSF1-209ENST00000585096 MTMR14Q8NCE2 650 aa22.33■■□□□ 1.17
SRSF1-209ENST00000585096 ZBED3Q96IU2 234 aaPredicted RBP22.33■■□□□ 1.17
SRSF1-209ENST00000585096 ZNF157P51786 506 aaPredicted RBP22.32■■□□□ 1.16
SRSF1-209ENST00000585096 PTPN12Q05209 780 aaKnown RBP22.32■■□□□ 1.16
SRSF1-209ENST00000585096 PUM3Q15397 648 aaKnown RBP22.32■■□□□ 1.16
SRSF1-209ENST00000585096 FBXO33Q7Z6M2 555 aa22.32■■□□□ 1.16
SRSF1-209ENST00000585096 FRAT1Q92837 279 aaPredicted RBP22.32■■□□□ 1.16
SRSF1-209ENST00000585096 FBXO3Q9UK99 471 aa22.32■■□□□ 1.16
SRSF1-209ENST00000585096 SCAF8Q9UPN6 1271 aaKnown RBP22.32■■□□□ 1.16
SRSF1-209ENST00000585096 LRRFIP2Q9Y608 721 aaKnown RBP22.32■■□□□ 1.16
SRSF1-209ENST00000585096 MYO1BO43795 1136 aa22.31■■□□□ 1.16
SRSF1-209ENST00000585096 FRAT2O75474 233 aaPredicted RBP22.31■■□□□ 1.16
SRSF1-209ENST00000585096 GNAI3P08754 354 aa22.31■■□□□ 1.16
SRSF1-209ENST00000585096 IFIT1P09914 478 aaKnown RBP22.31■■□□□ 1.16
SRSF1-209ENST00000585096 NF2P35240 595 aa22.31■■□□□ 1.16
SRSF1-209ENST00000585096 LBX1P52954 281 aa22.31■■□□□ 1.16
SRSF1-209ENST00000585096 MFSD14BQ5SR56 506 aa22.31■■□□□ 1.16
SRSF1-209ENST00000585096 ATF7IPQ6VMQ6 1270 aa22.31■■□□□ 1.16
SRSF1-209ENST00000585096 MEIS3Q99687 375 aa22.31■■□□□ 1.16
SRSF1-209ENST00000585096 BCAR3O75815 825 aa22.3■■□□□ 1.16
SRSF1-209ENST00000585096 HSPA8P11142 646 aaKnown RBP22.3■■□□□ 1.16
SRSF1-209ENST00000585096 CFAP100Q494V2 611 aa22.3■■□□□ 1.16
SRSF1-209ENST00000585096 THSD7BQ9C0I4 1608 aa22.29■■□□□ 1.16
SRSF1-209ENST00000585096 CA12O43570 354 aa22.29■■□□□ 1.16
SRSF1-209ENST00000585096 CIAO1O76071 339 aa22.29■■□□□ 1.16
SRSF1-209ENST00000585096 RBM5P52756 815 aaKnown RBP eCLIP22.29■■□□□ 1.165e-41■■■■□ 19.3
SRSF1-209ENST00000585096 PRAMEF18Q5VWM3 479 aa22.29■■□□□ 1.16
SRSF1-209ENST00000585096 A0A1B0GUL6 1792 aa22.28■■□□□ 1.16
SRSF1-209ENST00000585096 SPDYE2BA6NHP3 402 aa22.28■■□□□ 1.16
SRSF1-209ENST00000585096 SPDYE6P0CI01 402 aa22.28■■□□□ 1.16
SRSF1-209ENST00000585096 SLC5A1P13866 664 aa22.28■■□□□ 1.16
SRSF1-209ENST00000585096 TRIM27P14373 513 aa22.28■■□□□ 1.16
SRSF1-209ENST00000585096 FGFR2P21802 821 aa22.28■■□□□ 1.16
SRSF1-209ENST00000585096 TTLL12Q14166 644 aaPredicted RBP22.28■■□□□ 1.16
SRSF1-209ENST00000585096 TBC1D22AQ8WUA7 517 aa22.28■■□□□ 1.16
SRSF1-209ENST00000585096 LPIN2Q92539 896 aa22.28■■□□□ 1.16
SRSF1-209ENST00000585096 TTF2Q9UNY4 1162 aaKnown RBP22.28■■□□□ 1.16
SRSF1-209ENST00000585096 ZNF646O15015 1829 aaPredicted RBP22.27■■□□□ 1.16
SRSF1-209ENST00000585096 FAM155AB1AL88 458 aaPredicted RBP22.27■■□□□ 1.16
SRSF1-209ENST00000585096 BCAMP50895 628 aa22.27■■□□□ 1.16
SRSF1-209ENST00000585096 ATG9AQ7Z3C6 839 aa22.27■■□□□ 1.16
SRSF1-209ENST00000585096 SIL1Q9H173 461 aa22.27■■□□□ 1.16
SRSF1-209ENST00000585096 CEP126Q9P2H0 1117 aa22.27■■□□□ 1.16
SRSF1-209ENST00000585096 SERPINA10Q9UK55 444 aa22.27■■□□□ 1.16
SRSF1-209ENST00000585096 IQSEC3Q9UPP2 1182 aaPredicted RBP22.27■■□□□ 1.16
SRSF1-209ENST00000585096 SLC10A3P09131 477 aa22.26■■□□□ 1.15
SRSF1-209ENST00000585096 IL15P40933 162 aaPredicted RBP22.26■■□□□ 1.15
SRSF1-209ENST00000585096 CHAF1AQ13111 956 aaPredicted RBP22.26■■□□□ 1.15
SRSF1-209ENST00000585096 ZKSCAN2Q63HK3 967 aa22.26■■□□□ 1.15
SRSF1-209ENST00000585096 PRMT6Q96LA8 375 aaPredicted RBP22.26■■□□□ 1.15
SRSF1-209ENST00000585096 DEFB129Q9H1M3 183 aa22.26■■□□□ 1.15
SRSF1-209ENST00000585096 PPP2R3BQ9Y5P8 575 aa22.26■■□□□ 1.15
SRSF1-209ENST00000585096 COPRSQ9NQ92 184 aa22.25■■□□□ 1.15
SRSF1-209ENST00000585096 PCDHAC2Q9Y5I4 1007 aa22.25■■□□□ 1.15
SRSF1-209ENST00000585096 ZBED9Q6R2W3 1325 aa22.25■■□□□ 1.15
SRSF1-209ENST00000585096 COL1A1P02452 1464 aaPredicted RBP22.24■■□□□ 1.15
SRSF1-209ENST00000585096 CLRN2A0PK11 232 aa22.24■■□□□ 1.15
SRSF1-209ENST00000585096 UBE2Q2LH0YL09 131 aa22.24■■□□□ 1.15
SRSF1-209ENST00000585096 KIF23Q02241 960 aaPredicted RBP22.24■■□□□ 1.15
SRSF1-209ENST00000585096 MOB2Q70IA6 237 aa22.24■■□□□ 1.15
SRSF1-209ENST00000585096 ARMC9Q7Z3E5 817 aa22.24■■□□□ 1.15
SRSF1-209ENST00000585096 CLUAP1Q96AJ1 413 aa22.24■■□□□ 1.15
SRSF1-209ENST00000585096 ZIC5Q96T25 663 aa22.24■■□□□ 1.15
SRSF1-209ENST00000585096 VEZTQ9HBM0 779 aa22.24■■□□□ 1.15
SRSF1-209ENST00000585096 SRGAP3O43295 1099 aa22.23■■□□□ 1.15
SRSF1-209ENST00000585096 ATP2B3Q16720 1220 aa22.23■■□□□ 1.15
SRSF1-209ENST00000585096 REM2Q8IYK8 340 aaPredicted RBP22.23■■□□□ 1.15
SRSF1-209ENST00000585096 POLR2AP24928 1970 aaKnown RBP22.23■■□□□ 1.15
SRSF1-209ENST00000585096 GNAI2P04899 355 aa22.22■■□□□ 1.15
SRSF1-209ENST00000585096 MTX1Q13505 466 aa22.22■■□□□ 1.15
SRSF1-209ENST00000585096 RASAL3Q86YV0 1011 aa22.22■■□□□ 1.15
SRSF1-209ENST00000585096 PA2G4Q9UQ80 394 aaKnown RBP22.22■■□□□ 1.15
SRSF1-209ENST00000585096 TNNQ9UQP3 1299 aa22.22■■□□□ 1.15
SRSF1-209ENST00000585096 PAPPA2Q9BXP8 1791 aa22.22■■□□□ 1.15
SRSF1-209ENST00000585096 CRKP46108 304 aa22.21■■□□□ 1.15
SRSF1-209ENST00000585096 HDLBPQ00341 1268 aaKnown RBP22.21■■□□□ 1.15
SRSF1-209ENST00000585096 TNFAIP1Q13829 316 aa22.21■■□□□ 1.15
SRSF1-209ENST00000585096 SUPT20HL1Q3ZLR7 823 aa22.21■■□□□ 1.15
SRSF1-209ENST00000585096 DZIP1LQ8IYY4 767 aaKnown RBP22.21■■□□□ 1.15
SRSF1-209ENST00000585096 GNL3LQ9NVN8 582 aaKnown RBP22.21■■□□□ 1.15
SRSF1-209ENST00000585096 TSKSQ9UJT2 592 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms