RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 MYOZ2Q9NPC6 264 aa20.17■□□□□ 0.82
ERBB2-222ENST00000584908 ZBTB40Q9NUA8 1239 aa20.17■□□□□ 0.82
ERBB2-222ENST00000584908 COG6Q9Y2V7 657 aa20.17■□□□□ 0.82
ERBB2-222ENST00000584908 C20orf194Q5TEA3 1177 aa20.16■□□□□ 0.82
ERBB2-222ENST00000584908 CEP85Q6P2H3 762 aa20.16■□□□□ 0.82
ERBB2-222ENST00000584908 VPS37DQ86XT2 251 aa20.16■□□□□ 0.82
ERBB2-222ENST00000584908 OGFOD1Q8N543 542 aa20.16■□□□□ 0.82
ERBB2-222ENST00000584908 CHMP4BQ9H444 224 aaKnown RBP20.16■□□□□ 0.82
ERBB2-222ENST00000584908 BCAMP50895 628 aa20.15■□□□□ 0.82
ERBB2-222ENST00000584908 NOP58Q9Y2X3 529 aaKnown RBP20.15■□□□□ 0.82
ERBB2-222ENST00000584908 ECM29Q5VYK3 1845 aa20.15■□□□□ 0.82
ERBB2-222ENST00000584908 ZBED3Q96IU2 234 aaPredicted RBP20.14■□□□□ 0.81
ERBB2-222ENST00000584908 CREBZFQ9NS37 354 aa20.14■□□□□ 0.81
ERBB2-222ENST00000584908 AKAP2Q9Y2D5 859 aa20.14■□□□□ 0.81
ERBB2-222ENST00000584908 TFCP2Q12800 502 aa20.13■□□□□ 0.81
ERBB2-222ENST00000584908 G3BP1Q13283 466 aaKnown RBP eCLIP20.13■□□□□ 0.81
ERBB2-222ENST00000584908 RBM26Q5T8P6 1007 aaKnown RBP20.13■□□□□ 0.81
ERBB2-222ENST00000584908 CDC37L1Q7L3B6 337 aa20.13■□□□□ 0.81
ERBB2-222ENST00000584908 KIAA0825Q8IV33 1275 aa20.13■□□□□ 0.81
ERBB2-222ENST00000584908 DNAJC5GQ8N7S2 189 aa20.13■□□□□ 0.81
ERBB2-222ENST00000584908 HDAC9Q9UKV0 1011 aa20.13■□□□□ 0.81
ERBB2-222ENST00000584908 SCARF1Q14162 830 aa20.12■□□□□ 0.81
ERBB2-222ENST00000584908 MFSD14BQ5SR56 506 aa20.12■□□□□ 0.81
ERBB2-222ENST00000584908 MTMR14Q8NCE2 650 aa20.12■□□□□ 0.81
ERBB2-222ENST00000584908 PITPNM2Q9BZ72 1349 aa20.12■□□□□ 0.81
ERBB2-222ENST00000584908 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.12■□□□□ 0.81
ERBB2-222ENST00000584908 RPAP2Q8IXW5 612 aaPredicted RBP20.11■□□□□ 0.81
ERBB2-222ENST00000584908 TBC1D22AQ8WUA7 517 aa20.11■□□□□ 0.81
ERBB2-222ENST00000584908 GLIS2Q9BZE0 524 aaPredicted RBP20.11■□□□□ 0.81
ERBB2-222ENST00000584908 GPR108Q9NPR9 543 aa20.11■□□□□ 0.81
ERBB2-222ENST00000584908 A0A1B0GUL7 405 aa20.1■□□□□ 0.81
ERBB2-222ENST00000584908 TMEM88BA6NKF7 163 aa20.1■□□□□ 0.81
ERBB2-222ENST00000584908 WNT10BO00744 389 aa20.1■□□□□ 0.81
ERBB2-222ENST00000584908 TIMM10P62072 90 aa20.1■□□□□ 0.81
ERBB2-222ENST00000584908 HTRA3P83110 453 aa20.1■□□□□ 0.81
ERBB2-222ENST00000584908 DCPSQ96C86 337 aaKnown RBP20.1■□□□□ 0.81
ERBB2-222ENST00000584908 GGA3Q9NZ52 723 aa20.1■□□□□ 0.81
ERBB2-222ENST00000584908 IQSEC3Q9UPP2 1182 aaPredicted RBP20.1■□□□□ 0.81
ERBB2-222ENST00000584908 JAG2Q9Y219 1238 aa20.1■□□□□ 0.81
ERBB2-222ENST00000584908 COL1A1P02452 1464 aaPredicted RBP20.1■□□□□ 0.81
ERBB2-222ENST00000584908 ASTN2O75129 1339 aaPredicted RBP20.09■□□□□ 0.81
ERBB2-222ENST00000584908 TRAF5O00463 557 aa20.09■□□□□ 0.81
ERBB2-222ENST00000584908 SEMA3EO15041 775 aa20.09■□□□□ 0.81
ERBB2-222ENST00000584908 SURF6O75683 361 aaKnown RBP20.09■□□□□ 0.81
ERBB2-222ENST00000584908 RRP1P56182 461 aaKnown RBP20.09■□□□□ 0.81
ERBB2-222ENST00000584908 NBPF9Q3BBW0 867 aa20.09■□□□□ 0.81
ERBB2-222ENST00000584908 SUGT1Q9Y2Z0 365 aa20.09■□□□□ 0.81
ERBB2-222ENST00000584908 FRAT2O75474 233 aaPredicted RBP20.08■□□□□ 0.81
ERBB2-222ENST00000584908 ADORA1P30542 326 aa20.08■□□□□ 0.81
ERBB2-222ENST00000584908 PHKA1P46020 1223 aa20.08■□□□□ 0.81
ERBB2-222ENST00000584908 FMR1Q06787 632 aaKnown RBP eCLIP20.08■□□□□ 0.81
ERBB2-222ENST00000584908 ANGEL2Q5VTE6 544 aaKnown RBP20.08■□□□□ 0.81
ERBB2-222ENST00000584908 CCDC102BQ68D86 513 aa20.08■□□□□ 0.81
ERBB2-222ENST00000584908 KRT26Q7Z3Y9 468 aa20.08■□□□□ 0.81
ERBB2-222ENST00000584908 GNL3LQ9NVN8 582 aaKnown RBP20.08■□□□□ 0.81
ERBB2-222ENST00000584908 PDS5AQ29RF7 1337 aaKnown RBP20.07■□□□□ 0.8
ERBB2-222ENST00000584908 CST9Q5W186 159 aa20.07■□□□□ 0.8
ERBB2-222ENST00000584908 USP48Q86UV5 1035 aa20.07■□□□□ 0.8
ERBB2-222ENST00000584908 SIRT2Q8IXJ6 389 aa20.07■□□□□ 0.8
ERBB2-222ENST00000584908 WDR66Q8TBY9 1149 aa20.07■□□□□ 0.8
ERBB2-222ENST00000584908 XAGE2Q96GT9 111 aa20.07■□□□□ 0.8
ERBB2-222ENST00000584908 SERPINA10Q9UK55 444 aa20.07■□□□□ 0.8
ERBB2-222ENST00000584908 HDLBPQ00341 1268 aaKnown RBP20.06■□□□□ 0.8
ERBB2-222ENST00000584908 CHAF1AQ13111 956 aaPredicted RBP20.06■□□□□ 0.8
ERBB2-222ENST00000584908 KLRG1Q96E93 195 aa20.06■□□□□ 0.8
ERBB2-222ENST00000584908 MRIQ9BWK5 157 aa20.06■□□□□ 0.8
ERBB2-222ENST00000584908 SALL1Q9NSC2 1324 aa20.06■□□□□ 0.8
ERBB2-222ENST00000584908 SPDYE2BA6NHP3 402 aa20.05■□□□□ 0.8
ERBB2-222ENST00000584908 F8W031 263 aaPredicted RBP20.05■□□□□ 0.8
ERBB2-222ENST00000584908 HMMRO75330 724 aa20.05■□□□□ 0.8
ERBB2-222ENST00000584908 SPDYE6P0CI01 402 aa20.05■□□□□ 0.8
ERBB2-222ENST00000584908 DLGAP5Q15398 846 aa20.05■□□□□ 0.8
ERBB2-222ENST00000584908 GRIK5Q16478 980 aa20.05■□□□□ 0.8
ERBB2-222ENST00000584908 SULF1Q8IWU6 871 aa20.05■□□□□ 0.8
ERBB2-222ENST00000584908 DENND2AQ9ULE3 1009 aa20.05■□□□□ 0.8
ERBB2-222ENST00000584908 TTF2Q9UNY4 1162 aaKnown RBP20.05■□□□□ 0.8
ERBB2-222ENST00000584908 OS9Q13438 667 aaPredicted RBP20.04■□□□□ 0.8
ERBB2-222ENST00000584908 CFAP100Q494V2 611 aa20.04■□□□□ 0.8
ERBB2-222ENST00000584908 HSP90AB4PQ58FF6 505 aa20.04■□□□□ 0.8
ERBB2-222ENST00000584908 TNNI3KQ59H18 835 aa20.04■□□□□ 0.8
ERBB2-222ENST00000584908 FPGT-TNNI3KV9GXZ4 949 aa20.04■□□□□ 0.8
ERBB2-222ENST00000584908 RASSF10A6NK89 507 aa20.03■□□□□ 0.8
ERBB2-222ENST00000584908 ADM5C9JUS6 153 aa20.03■□□□□ 0.8
ERBB2-222ENST00000584908 RASGRF1Q13972 1273 aa20.03■□□□□ 0.8
ERBB2-222ENST00000584908 ERC1Q8IUD2 1116 aa20.03■□□□□ 0.8
ERBB2-222ENST00000584908 NEUROD6Q96NK8 337 aa20.03■□□□□ 0.8
ERBB2-222ENST00000584908 CNTNAP1P78357 1384 aa20.03■□□□□ 0.8
ERBB2-222ENST00000584908 AKAP11Q9UKA4 1901 aa20.03■□□□□ 0.8
ERBB2-222ENST00000584908 MAST3O60307 1309 aa20.03■□□□□ 0.8
ERBB2-222ENST00000584908 CELF2O95319 508 aaKnown RBP20.02■□□□□ 0.8
ERBB2-222ENST00000584908 ARID4AP29374 1257 aaPredicted RBP20.02■□□□□ 0.8
ERBB2-222ENST00000584908 PRMT6Q96LA8 375 aaPredicted RBP20.02■□□□□ 0.8
ERBB2-222ENST00000584908 EXOC6BQ9Y2D4 811 aa20.02■□□□□ 0.8
ERBB2-222ENST00000584908 PCDHAC2Q9Y5I4 1007 aa20.02■□□□□ 0.8
ERBB2-222ENST00000584908 PCNTO95613 3336 aa20.02■□□□□ 0.8
ERBB2-222ENST00000584908 CRKP46108 304 aa20.02■□□□□ 0.79
ERBB2-222ENST00000584908 DLK2Q6UY11 383 aa20.02■□□□□ 0.79
ERBB2-222ENST00000584908 APOBEC3FQ8IUX4 373 aaKnown RBP20.02■□□□□ 0.79
ERBB2-222ENST00000584908 JMYQ8N9B5 988 aa20.02■□□□□ 0.79
ERBB2-222ENST00000584908 TLL2Q9Y6L7 1015 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 287 ms