RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 C2orf69Q8N8R5 385 aa26.86■■□□□ 1.89
PPP4R1-228ENST00000584074 MEIS3Q99687 375 aa26.86■■□□□ 1.89
PPP4R1-228ENST00000584074 F8W031 263 aaPredicted RBP26.85■■□□□ 1.89
PPP4R1-228ENST00000584074 PDE8BO95263 885 aa26.85■■□□□ 1.89
PPP4R1-228ENST00000584074 MAP2K1Q02750 393 aaPredicted RBP26.85■■□□□ 1.89
PPP4R1-228ENST00000584074 INTS3Q68E01 1043 aaKnown RBP26.85■■□□□ 1.89
PPP4R1-228ENST00000584074 TDRD7Q8NHU6 1098 aaKnown RBP26.85■■□□□ 1.89
PPP4R1-228ENST00000584074 LRRFIP2Q9Y608 721 aaKnown RBP26.85■■□□□ 1.89
PPP4R1-228ENST00000584074 PTPN12Q05209 780 aaKnown RBP26.84■■□□□ 1.89
PPP4R1-228ENST00000584074 FRAT1Q92837 279 aaPredicted RBP26.84■■□□□ 1.89
PPP4R1-228ENST00000584074 ZBED3Q96IU2 234 aaPredicted RBP26.84■■□□□ 1.89
PPP4R1-228ENST00000584074 TNNQ9UQP3 1299 aa26.84■■□□□ 1.89
PPP4R1-228ENST00000584074 EYA2O00167 538 aa26.83■■□□□ 1.89
PPP4R1-228ENST00000584074 IPO8O15397 1037 aaKnown RBP26.83■■□□□ 1.89
PPP4R1-228ENST00000584074 TRIM27P14373 513 aa26.83■■□□□ 1.89
PPP4R1-228ENST00000584074 FKBP1AP62942 108 aaKnown RBP26.83■■□□□ 1.89
PPP4R1-228ENST00000584074 PRAMEF18Q5VWM3 479 aa26.83■■□□□ 1.89
PPP4R1-228ENST00000584074 FBXO33Q7Z6M2 555 aa26.83■■□□□ 1.89
PPP4R1-228ENST00000584074 FAM205AQ6ZU69 1335 aa26.83■■□□□ 1.89
PPP4R1-228ENST00000584074 THSD7BQ9C0I4 1608 aa26.83■■□□□ 1.88
PPP4R1-228ENST00000584074 MAP2K2P36507 400 aa26.82■■□□□ 1.88
PPP4R1-228ENST00000584074 CTCFP49711 727 aaPredicted RBP26.81■■□□□ 1.88
PPP4R1-228ENST00000584074 DLGAP5Q15398 846 aa26.81■■□□□ 1.88
PPP4R1-228ENST00000584074 ATF7IPQ6VMQ6 1270 aa26.81■■□□□ 1.88
PPP4R1-228ENST00000584074 ATG9AQ7Z3C6 839 aa26.81■■□□□ 1.88
PPP4R1-228ENST00000584074 VPS37DQ86XT2 251 aa26.81■■□□□ 1.88
PPP4R1-228ENST00000584074 IQSEC3Q9UPP2 1182 aaPredicted RBP26.81■■□□□ 1.88
PPP4R1-228ENST00000584074 PCDHAC2Q9Y5I4 1007 aa26.81■■□□□ 1.88
PPP4R1-228ENST00000584074 SIL1Q9H173 461 aa26.8■■□□□ 1.88
PPP4R1-228ENST00000584074 HDAC5Q9UQL6 1122 aa26.8■■□□□ 1.88
PPP4R1-228ENST00000584074 PUM3Q15397 648 aaKnown RBP26.79■■□□□ 1.88
PPP4R1-228ENST00000584074 CAVIN4Q5BKX8 364 aa26.79■■□□□ 1.88
PPP4R1-228ENST00000584074 MFSD14BQ5SR56 506 aa26.79■■□□□ 1.88
PPP4R1-228ENST00000584074 RGMBQ6NW40 437 aa26.79■■□□□ 1.88
PPP4R1-228ENST00000584074 MTMR14Q8NCE2 650 aa26.79■■□□□ 1.88
PPP4R1-228ENST00000584074 CLUAP1Q96AJ1 413 aa26.79■■□□□ 1.88
PPP4R1-228ENST00000584074 FGFR2P21802 821 aa26.78■■□□□ 1.88
PPP4R1-228ENST00000584074 BCAMP50895 628 aa26.78■■□□□ 1.88
PPP4R1-228ENST00000584074 CFAP100Q494V2 611 aa26.78■■□□□ 1.88
PPP4R1-228ENST00000584074 ZIC5Q96T25 663 aa26.78■■□□□ 1.88
PPP4R1-228ENST00000584074 GNAI3P08754 354 aa26.77■■□□□ 1.88
PPP4R1-228ENST00000584074 LBX1P52954 281 aa26.77■■□□□ 1.88
PPP4R1-228ENST00000584074 APOBEC3FQ8IUX4 373 aaKnown RBP26.77■■□□□ 1.88
PPP4R1-228ENST00000584074 ZBED9Q6R2W3 1325 aa26.76■■□□□ 1.87
PPP4R1-228ENST00000584074 SPDYE2BA6NHP3 402 aa26.76■■□□□ 1.87
PPP4R1-228ENST00000584074 FAM155AB1AL88 458 aaPredicted RBP26.76■■□□□ 1.87
PPP4R1-228ENST00000584074 IFIT1P09914 478 aaKnown RBP26.76■■□□□ 1.87
PPP4R1-228ENST00000584074 SPDYE6P0CI01 402 aa26.76■■□□□ 1.87
PPP4R1-228ENST00000584074 ZNF157P51786 506 aaPredicted RBP26.76■■□□□ 1.87
PPP4R1-228ENST00000584074 CHAF1AQ13111 956 aaPredicted RBP26.76■■□□□ 1.87
PPP4R1-228ENST00000584074 NOGQ13253 232 aa26.76■■□□□ 1.87
PPP4R1-228ENST00000584074 MOB2Q70IA6 237 aa26.76■■□□□ 1.87
PPP4R1-228ENST00000584074 TNS4Q8IZW8 715 aa26.76■■□□□ 1.87
PPP4R1-228ENST00000584074 PRMT6Q96LA8 375 aaPredicted RBP26.76■■□□□ 1.87
PPP4R1-228ENST00000584074 BEGAINQ9BUH8 593 aa26.76■■□□□ 1.87
PPP4R1-228ENST00000584074 PA2G4Q9UQ80 394 aaKnown RBP26.76■■□□□ 1.87
PPP4R1-228ENST00000584074 AOX1Q06278 1338 aa26.75■■□□□ 1.87
PPP4R1-228ENST00000584074 FRAT2O75474 233 aaPredicted RBP26.75■■□□□ 1.87
PPP4R1-228ENST00000584074 CIAO1O76071 339 aa26.75■■□□□ 1.87
PPP4R1-228ENST00000584074 HSPA8P11142 646 aaKnown RBP26.75■■□□□ 1.87
PPP4R1-228ENST00000584074 RBM5P52756 815 aaKnown RBP eCLIP26.75■■□□□ 1.87
PPP4R1-228ENST00000584074 FKBP1BP68106 108 aa26.75■■□□□ 1.87
PPP4R1-228ENST00000584074 PRDM10Q9NQV6 1147 aa26.75■■□□□ 1.87
PPP4R1-228ENST00000584074 FBXO3Q9UK99 471 aa26.75■■□□□ 1.87
PPP4R1-228ENST00000584074 TTF2Q9UNY4 1162 aaKnown RBP26.75■■□□□ 1.87
PPP4R1-228ENST00000584074 CLRN2A0PK11 232 aa26.74■■□□□ 1.87
PPP4R1-228ENST00000584074 GRIK5Q16478 980 aa26.74■■□□□ 1.87
PPP4R1-228ENST00000584074 ZKSCAN2Q63HK3 967 aa26.74■■□□□ 1.87
PPP4R1-228ENST00000584074 LPIN2Q92539 896 aa26.74■■□□□ 1.87
PPP4R1-228ENST00000584074 CCDC102AQ96A19 550 aa26.74■■□□□ 1.87
PPP4R1-228ENST00000584074 SLC5A1P13866 664 aa26.73■■□□□ 1.87
PPP4R1-228ENST00000584074 COPRSQ9NQ92 184 aa26.73■■□□□ 1.87
PPP4R1-228ENST00000584074 UBE2Q2LH0YL09 131 aa26.72■■□□□ 1.87
PPP4R1-228ENST00000584074 DEFB129Q9H1M3 183 aa26.72■■□□□ 1.87
PPP4R1-228ENST00000584074 CEP126Q9P2H0 1117 aa26.72■■□□□ 1.87
PPP4R1-228ENST00000584074 SRGAP3O43295 1099 aa26.71■■□□□ 1.87
PPP4R1-228ENST00000584074 MYO1BO43795 1136 aa26.71■■□□□ 1.87
PPP4R1-228ENST00000584074 IL15P40933 162 aaPredicted RBP26.71■■□□□ 1.87
PPP4R1-228ENST00000584074 TTLL12Q14166 644 aaPredicted RBP26.71■■□□□ 1.87
PPP4R1-228ENST00000584074 TMEM57Q8N5G2 664 aa26.71■■□□□ 1.87
PPP4R1-228ENST00000584074 TSKSQ9UJT2 592 aa26.71■■□□□ 1.87
PPP4R1-228ENST00000584074 SERPINA10Q9UK55 444 aa26.71■■□□□ 1.87
PPP4R1-228ENST00000584074 PAPPA2Q9BXP8 1791 aa26.71■■□□□ 1.87
PPP4R1-228ENST00000584074 SLC10A3P09131 477 aa26.7■■□□□ 1.86
PPP4R1-228ENST00000584074 NF2P35240 595 aa26.7■■□□□ 1.86
PPP4R1-228ENST00000584074 MTX1Q13505 466 aa26.7■■□□□ 1.86
PPP4R1-228ENST00000584074 ATP2B3Q16720 1220 aa26.7■■□□□ 1.86
PPP4R1-228ENST00000584074 VEZTQ9HBM0 779 aa26.7■■□□□ 1.86
PPP4R1-228ENST00000584074 GNAI2P04899 355 aa26.69■■□□□ 1.86
PPP4R1-228ENST00000584074 KIF23Q02241 960 aaPredicted RBP26.69■■□□□ 1.86
PPP4R1-228ENST00000584074 TBC1D22AQ8WUA7 517 aa26.69■■□□□ 1.86
PPP4R1-228ENST00000584074 PRKG1Q13976 671 aa26.68■■□□□ 1.86
PPP4R1-228ENST00000584074 RASAL3Q86YV0 1011 aa26.68■■□□□ 1.86
PPP4R1-228ENST00000584074 CRKP46108 304 aa26.67■■□□□ 1.86
PPP4R1-228ENST00000584074 DZIP1LQ8IYY4 767 aaKnown RBP26.67■■□□□ 1.86
PPP4R1-228ENST00000584074 COL1A1P02452 1464 aaPredicted RBP26.67■■□□□ 1.86
PPP4R1-228ENST00000584074 TDRD3Q9H7E2 651 aaKnown RBP26.66■■□□□ 1.86
PPP4R1-228ENST00000584074 FZD1Q9UP38 647 aa26.66■■□□□ 1.86
PPP4R1-228ENST00000584074 ARAP2Q8WZ64 1704 aa26.65■■□□□ 1.86
PPP4R1-228ENST00000584074 CA12O43570 354 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms