RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 ARMC5Q96C12 935 aa15.76■□□□□ 0.11
TOP3A-215ENST00000583328 TMEM106CQ9BVX2 250 aa15.76■□□□□ 0.11
TOP3A-215ENST00000583328 STK31Q9BXU1 1019 aa15.76■□□□□ 0.11
TOP3A-215ENST00000583328 VEZTQ9HBM0 779 aa15.76■□□□□ 0.11
TOP3A-215ENST00000583328 PCDHAC2Q9Y5I4 1007 aa15.76■□□□□ 0.11
TOP3A-215ENST00000583328 COL1A1P02452 1464 aaPredicted RBP15.76■□□□□ 0.11
TOP3A-215ENST00000583328 CHRNDQ07001 517 aa15.75■□□□□ 0.11
TOP3A-215ENST00000583328 DDX10Q13206 875 aaKnown RBP15.75■□□□□ 0.11
TOP3A-215ENST00000583328 NBPF12Q5TAG4 269 aaPredicted RBP15.75■□□□□ 0.11
TOP3A-215ENST00000583328 CERS5Q8N5B7 392 aa15.75■□□□□ 0.11
TOP3A-215ENST00000583328 TSPYL6Q8N831 410 aa15.75■□□□□ 0.11
TOP3A-215ENST00000583328 ZNF316A6NFI3 1004 aaPredicted RBP15.74■□□□□ 0.11
TOP3A-215ENST00000583328 SNAP23O00161 211 aa15.74■□□□□ 0.11
TOP3A-215ENST00000583328 USP2O75604 605 aaPredicted RBP15.74■□□□□ 0.11
TOP3A-215ENST00000583328 GJA5P36382 358 aa15.74■□□□□ 0.11
TOP3A-215ENST00000583328 RBM5P52756 815 aaKnown RBP eCLIP15.74■□□□□ 0.11
TOP3A-215ENST00000583328 ANKRD13AQ8IZ07 590 aa15.74■□□□□ 0.11
TOP3A-215ENST00000583328 PRMT6Q96LA8 375 aaPredicted RBP15.74■□□□□ 0.11
TOP3A-215ENST00000583328 PLA2G12BQ9BX93 195 aa15.74■□□□□ 0.11
TOP3A-215ENST00000583328 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
TOP3A-215ENST00000583328 TAF5LO75529 589 aa15.73■□□□□ 0.11
TOP3A-215ENST00000583328 CSF1RP07333 972 aa15.73■□□□□ 0.11
TOP3A-215ENST00000583328 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
TOP3A-215ENST00000583328 RASA3Q14644 834 aa15.73■□□□□ 0.11
TOP3A-215ENST00000583328 ARHGEF6Q15052 776 aa15.73■□□□□ 0.11
TOP3A-215ENST00000583328 HELBQ8NG08 1087 aaPredicted RBP15.73■□□□□ 0.11
TOP3A-215ENST00000583328 PTPN18Q99952 460 aa15.73■□□□□ 0.11
TOP3A-215ENST00000583328 KIAA0100Q14667 2235 aaKnown RBP15.73■□□□□ 0.11
TOP3A-215ENST00000583328 ANKRD18BA2A2Z9 1011 aa15.72■□□□□ 0.11
TOP3A-215ENST00000583328 TESPA1A2RU30 521 aaPredicted RBP15.72■□□□□ 0.11
TOP3A-215ENST00000583328 FXR1P51114 621 aaKnown RBP eCLIP15.72■□□□□ 0.11
TOP3A-215ENST00000583328 GCKRQ14397 625 aa15.72■□□□□ 0.11
TOP3A-215ENST00000583328 ZNF804AQ7Z570 1209 aa15.72■□□□□ 0.11
TOP3A-215ENST00000583328 NBPF11Q86T75 865 aa15.72■□□□□ 0.11
TOP3A-215ENST00000583328 SSC5DA1L4H1 1573 aa15.71■□□□□ 0.11
TOP3A-215ENST00000583328 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
TOP3A-215ENST00000583328 FKBP1AP62942 108 aaKnown RBP15.71■□□□□ 0.11
TOP3A-215ENST00000583328 SLC4A8Q2Y0W8 1093 aa15.71■□□□□ 0.11
TOP3A-215ENST00000583328 C15orf52Q6ZUT6 534 aaKnown RBP15.71■□□□□ 0.11
TOP3A-215ENST00000583328 G2E3Q7L622 706 aa15.71■□□□□ 0.11
TOP3A-215ENST00000583328 OPTNQ96CV9 577 aa15.71■□□□□ 0.11
TOP3A-215ENST00000583328 MYH16Q9H6N6 1097 aa15.71■□□□□ 0.11
TOP3A-215ENST00000583328 ELP3Q9H9T3 547 aa15.71■□□□□ 0.11
TOP3A-215ENST00000583328 JAG2Q9Y219 1238 aa15.71■□□□□ 0.11
TOP3A-215ENST00000583328 IL1R1P14778 569 aa15.7■□□□□ 0.1
TOP3A-215ENST00000583328 CASP7P55210 303 aa15.7■□□□□ 0.1
TOP3A-215ENST00000583328 CAP1Q01518 475 aa15.7■□□□□ 0.1
TOP3A-215ENST00000583328 SLC9C1Q4G0N8 1177 aa15.7■□□□□ 0.1
TOP3A-215ENST00000583328 ZNF333Q96JL9 665 aa15.7■□□□□ 0.1
TOP3A-215ENST00000583328 ZFYVE28Q9HCC9 887 aa15.7■□□□□ 0.1
TOP3A-215ENST00000583328 COLQQ9Y215 455 aaPredicted RBP15.7■□□□□ 0.1
TOP3A-215ENST00000583328 AOX1Q06278 1338 aa15.69■□□□□ 0.1
TOP3A-215ENST00000583328 IRS2Q9Y4H2 1338 aa15.69■□□□□ 0.1
TOP3A-215ENST00000583328 IFIT5Q13325 482 aaKnown RBP15.69■□□□□ 0.1
TOP3A-215ENST00000583328 TNFAIP1Q13829 316 aa15.69■□□□□ 0.1
TOP3A-215ENST00000583328 TAF1CQ15572 869 aaPredicted RBP15.69■□□□□ 0.1
TOP3A-215ENST00000583328 TSR2Q969E8 191 aaKnown RBP15.69■□□□□ 0.1
TOP3A-215ENST00000583328 CHMP3Q9Y3E7 222 aa15.69■□□□□ 0.1
TOP3A-215ENST00000583328 PTCH2Q9Y6C5 1203 aa15.69■□□□□ 0.1
TOP3A-215ENST00000583328 PLIN1O60240 522 aa15.68■□□□□ 0.1
TOP3A-215ENST00000583328 MYCP01106 439 aaPredicted RBP15.68■□□□□ 0.1
TOP3A-215ENST00000583328 TWISTNBQ3B726 338 aaPredicted RBP15.68■□□□□ 0.1
TOP3A-215ENST00000583328 DNAAF4Q8WXU2 420 aa15.68■□□□□ 0.1
TOP3A-215ENST00000583328 MS4A4AQ96JQ5 239 aa15.68■□□□□ 0.1
TOP3A-215ENST00000583328 ZNF70Q9UC06 446 aaPredicted RBP15.68■□□□□ 0.1
TOP3A-215ENST00000583328 CCL15-CCL14A0A0B4J2E2 113 aa15.67■□□□□ 0.1
TOP3A-215ENST00000583328 GTF2A2P52657 109 aa15.67■□□□□ 0.1
TOP3A-215ENST00000583328 MAP3K9P80192 1104 aa15.67■□□□□ 0.1
TOP3A-215ENST00000583328 FLIIQ13045 1269 aa15.67■□□□□ 0.1
TOP3A-215ENST00000583328 FKBP5Q13451 457 aaPredicted RBP15.67■□□□□ 0.1
TOP3A-215ENST00000583328 CCL15Q16663 113 aa15.67■□□□□ 0.1
TOP3A-215ENST00000583328 LINS1Q8NG48 757 aa15.67■□□□□ 0.1
TOP3A-215ENST00000583328 BRI3BPQ8WY22 251 aa15.67■□□□□ 0.1
TOP3A-215ENST00000583328 TDRD3Q9H7E2 651 aaKnown RBP15.67■□□□□ 0.1
TOP3A-215ENST00000583328 ZNF646O15015 1829 aaPredicted RBP15.66■□□□□ 0.1
TOP3A-215ENST00000583328 WDHD1O75717 1129 aaPredicted RBP15.66■□□□□ 0.1
TOP3A-215ENST00000583328 SPDYE2Q495Y8 402 aa15.66■□□□□ 0.1
TOP3A-215ENST00000583328 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.66■□□□□ 0.1
TOP3A-215ENST00000583328 CNKSR2Q8WXI2 1034 aa15.66■□□□□ 0.1
TOP3A-215ENST00000583328 TTF2Q9UNY4 1162 aaKnown RBP15.66■□□□□ 0.1
TOP3A-215ENST00000583328 SPEF2Q9C093 1822 aa15.66■□□□□ 0.1
TOP3A-215ENST00000583328 TCP10L2B9ZVM9 353 aa15.65■□□□□ 0.1
TOP3A-215ENST00000583328 KIF22Q14807 665 aa15.65■□□□□ 0.1
TOP3A-215ENST00000583328 TAF7LQ5H9L4 462 aa15.65■□□□□ 0.1
TOP3A-215ENST00000583328 MFSD14BQ5SR56 506 aa15.65■□□□□ 0.1
TOP3A-215ENST00000583328 SERPINA10Q9UK55 444 aa15.65■□□□□ 0.1
TOP3A-215ENST00000583328 CSADQ9Y600 493 aa15.65■□□□□ 0.1
TOP3A-215ENST00000583328 TNNI2P48788 182 aa15.64■□□□□ 0.09
TOP3A-215ENST00000583328 FOXO4P98177 505 aa15.64■□□□□ 0.09
TOP3A-215ENST00000583328 VGLL4Q14135 290 aa15.64■□□□□ 0.09
TOP3A-215ENST00000583328 CCDC57Q2TAC2 916 aa15.64■□□□□ 0.09
TOP3A-215ENST00000583328 LDHAL6AQ6ZMR3 332 aa15.64■□□□□ 0.09
TOP3A-215ENST00000583328 DZIP1LQ8IYY4 767 aaKnown RBP15.64■□□□□ 0.09
TOP3A-215ENST00000583328 FAM43AQ8N2R8 423 aa15.64■□□□□ 0.09
TOP3A-215ENST00000583328 OTUD5Q96G74 571 aa15.64■□□□□ 0.09
TOP3A-215ENST00000583328 TMEM39BQ9GZU3 492 aa15.64■□□□□ 0.09
TOP3A-215ENST00000583328 CNNM1Q9NRU3 951 aa15.64■□□□□ 0.09
TOP3A-215ENST00000583328 FAM205AQ6ZU69 1335 aa15.64■□□□□ 0.09
TOP3A-215ENST00000583328 MYH3P11055 1940 aa15.63■□□□□ 0.09
TOP3A-215ENST00000583328 H0YGN5 161 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms