RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 PA2G4Q9UQ80 394 aaKnown RBP23.39■■□□□ 1.33
LIMS2-218ENST00000582671 FAM205AQ6ZU69 1335 aa23.38■■□□□ 1.33
LIMS2-218ENST00000582671 THSD7BQ9C0I4 1608 aa23.38■■□□□ 1.33
LIMS2-218ENST00000582671 WNT10BO00744 389 aa23.38■■□□□ 1.33
LIMS2-218ENST00000582671 SAPCD2Q86UD0 394 aa23.38■■□□□ 1.33
LIMS2-218ENST00000582671 SULF1Q8IWU6 871 aa23.38■■□□□ 1.33
LIMS2-218ENST00000582671 CIAO1O76071 339 aa23.37■■□□□ 1.33
LIMS2-218ENST00000582671 FKBP1AP62942 108 aaKnown RBP23.37■■□□□ 1.33
LIMS2-218ENST00000582671 ZBED3Q96IU2 234 aaPredicted RBP23.37■■□□□ 1.33
LIMS2-218ENST00000582671 COPRSQ9NQ92 184 aa23.37■■□□□ 1.33
LIMS2-218ENST00000582671 F8W031 263 aaPredicted RBP23.36■■□□□ 1.33
LIMS2-218ENST00000582671 RLBP1P12271 317 aa23.36■■□□□ 1.33
LIMS2-218ENST00000582671 MMP14P50281 582 aa23.36■■□□□ 1.33
LIMS2-218ENST00000582671 PUM3Q15397 648 aaKnown RBP23.36■■□□□ 1.33
LIMS2-218ENST00000582671 FBXO3Q9UK99 471 aa23.36■■□□□ 1.33
LIMS2-218ENST00000582671 HDAC9Q9UKV0 1011 aa23.36■■□□□ 1.33
LIMS2-218ENST00000582671 IQSEC3Q9UPP2 1182 aaPredicted RBP23.36■■□□□ 1.33
LIMS2-218ENST00000582671 PCDHAC2Q9Y5I4 1007 aa23.36■■□□□ 1.33
LIMS2-218ENST00000582671 PITPNM2Q9BZ72 1349 aa23.35■■□□□ 1.33
LIMS2-218ENST00000582671 WDR33Q9C0J8 1336 aaKnown RBP23.35■■□□□ 1.33
LIMS2-218ENST00000582671 HSPA1AP0DMV8 641 aaKnown RBP23.35■■□□□ 1.33
LIMS2-218ENST00000582671 HSPA1BP0DMV9 641 aaKnown RBP23.35■■□□□ 1.33
LIMS2-218ENST00000582671 BCAMP50895 628 aa23.35■■□□□ 1.33
LIMS2-218ENST00000582671 MTX1Q13505 466 aa23.35■■□□□ 1.33
LIMS2-218ENST00000582671 CYP4F22Q6NT55 531 aa23.35■■□□□ 1.33
LIMS2-218ENST00000582671 CDCA5Q96FF9 252 aa23.35■■□□□ 1.33
LIMS2-218ENST00000582671 SRGAP3O43295 1099 aa23.34■■□□□ 1.33
LIMS2-218ENST00000582671 GNAI2P04899 355 aa23.33■■□□□ 1.33
LIMS2-218ENST00000582671 CAVIN4Q5BKX8 364 aa23.33■■□□□ 1.33
LIMS2-218ENST00000582671 MFSD14BQ5SR56 506 aa23.33■■□□□ 1.33
LIMS2-218ENST00000582671 PAXIP1Q6ZW49 1069 aaPredicted RBP23.33■■□□□ 1.33
LIMS2-218ENST00000582671 VPS37DQ86XT2 251 aa23.33■■□□□ 1.33
LIMS2-218ENST00000582671 DZIP1LQ8IYY4 767 aaKnown RBP23.33■■□□□ 1.33
LIMS2-218ENST00000582671 CAPNS2Q96L46 248 aa23.33■■□□□ 1.33
LIMS2-218ENST00000582671 IFIT1P09914 478 aaKnown RBP23.32■■□□□ 1.32
LIMS2-218ENST00000582671 IL15P40933 162 aaPredicted RBP23.32■■□□□ 1.32
LIMS2-218ENST00000582671 GRIK5Q16478 980 aa23.32■■□□□ 1.32
LIMS2-218ENST00000582671 LPIN2Q92539 896 aa23.32■■□□□ 1.32
LIMS2-218ENST00000582671 GBA2Q9HCG7 927 aaPredicted RBP23.32■■□□□ 1.32
LIMS2-218ENST00000582671 CEP126Q9P2H0 1117 aa23.32■■□□□ 1.32
LIMS2-218ENST00000582671 PNMA6EA0A0J9YXQ4 647 aa23.31■■□□□ 1.32
LIMS2-218ENST00000582671 SLC5A1P13866 664 aa23.31■■□□□ 1.32
LIMS2-218ENST00000582671 GRM1Q13255 1194 aa23.31■■□□□ 1.32
LIMS2-218ENST00000582671 DLGAP5Q15398 846 aa23.31■■□□□ 1.32
LIMS2-218ENST00000582671 CFAP100Q494V2 611 aa23.31■■□□□ 1.32
LIMS2-218ENST00000582671 PRAMEF18Q5VWM3 479 aa23.31■■□□□ 1.32
LIMS2-218ENST00000582671 FTSJ3Q8IY81 847 aaKnown RBP23.31■■□□□ 1.32
LIMS2-218ENST00000582671 MTMR14Q8NCE2 650 aa23.31■■□□□ 1.32
LIMS2-218ENST00000582671 AOX1Q06278 1338 aa23.31■■□□□ 1.32
LIMS2-218ENST00000582671 CHAF1AQ13111 956 aaPredicted RBP23.3■■□□□ 1.32
LIMS2-218ENST00000582671 ATP2B3Q16720 1220 aa23.3■■□□□ 1.32
LIMS2-218ENST00000582671 HHIPL1Q96JK4 782 aa23.3■■□□□ 1.32
LIMS2-218ENST00000582671 PRMT6Q96LA8 375 aaPredicted RBP23.3■■□□□ 1.32
LIMS2-218ENST00000582671 PCNTO95613 3336 aa23.3■■□□□ 1.32
LIMS2-218ENST00000582671 PAPPA2Q9BXP8 1791 aa23.29■■□□□ 1.32
LIMS2-218ENST00000582671 ECE1P42892 770 aa23.29■■□□□ 1.32
LIMS2-218ENST00000582671 HUNKP57058 714 aa23.29■■□□□ 1.32
LIMS2-218ENST00000582671 TTF2Q9UNY4 1162 aaKnown RBP23.29■■□□□ 1.32
LIMS2-218ENST00000582671 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.29■■□□□ 1.32
LIMS2-218ENST00000582671 COL1A1P02452 1464 aaPredicted RBP23.29■■□□□ 1.32
LIMS2-218ENST00000582671 ZBTB7BO15156 539 aaPredicted RBP23.28■■□□□ 1.32
LIMS2-218ENST00000582671 AOC2O75106 756 aa23.28■■□□□ 1.32
LIMS2-218ENST00000582671 ITPRIPQ8IWB1 547 aa23.28■■□□□ 1.32
LIMS2-218ENST00000582671 C2orf69Q8N8R5 385 aa23.28■■□□□ 1.32
LIMS2-218ENST00000582671 C1orf115Q9H7X2 142 aa23.28■■□□□ 1.32
LIMS2-218ENST00000582671 SPDYE2BA6NHP3 402 aa23.27■■□□□ 1.32
LIMS2-218ENST00000582671 FRAT2O75474 233 aaPredicted RBP23.27■■□□□ 1.32
LIMS2-218ENST00000582671 SPDYE6P0CI01 402 aa23.27■■□□□ 1.32
LIMS2-218ENST00000582671 PANK1Q8TE04 598 aa23.27■■□□□ 1.32
LIMS2-218ENST00000582671 ADORA1P30542 326 aa23.26■■□□□ 1.31
LIMS2-218ENST00000582671 TFCP2Q12800 502 aa23.26■■□□□ 1.31
LIMS2-218ENST00000582671 APOBEC3FQ8IUX4 373 aaKnown RBP23.26■■□□□ 1.31
LIMS2-218ENST00000582671 WBP1LQ9NX94 342 aa23.26■■□□□ 1.31
LIMS2-218ENST00000582671 CLRN2A0PK11 232 aa23.25■■□□□ 1.31
LIMS2-218ENST00000582671 RBM5P52756 815 aaKnown RBP eCLIP23.25■■□□□ 1.31
LIMS2-218ENST00000582671 TIMM10P62072 90 aa23.25■■□□□ 1.31
LIMS2-218ENST00000582671 MOB2Q70IA6 237 aa23.25■■□□□ 1.31
LIMS2-218ENST00000582671 TBC1D22AQ8WUA7 517 aa23.25■■□□□ 1.31
LIMS2-218ENST00000582671 FOXN1O15353 648 aa23.24■■□□□ 1.31
LIMS2-218ENST00000582671 ATP8B2P98198 1209 aa23.24■■□□□ 1.31
LIMS2-218ENST00000582671 POLA2Q14181 598 aa23.24■■□□□ 1.31
LIMS2-218ENST00000582671 RGMBQ6NW40 437 aa23.24■■□□□ 1.31
LIMS2-218ENST00000582671 SERPINA10Q9UK55 444 aa23.24■■□□□ 1.31
LIMS2-218ENST00000582671 PHKA1P46020 1223 aa23.23■■□□□ 1.31
LIMS2-218ENST00000582671 CRKP46108 304 aa23.23■■□□□ 1.31
LIMS2-218ENST00000582671 ZIC5Q96T25 663 aa23.23■■□□□ 1.31
LIMS2-218ENST00000582671 RCAN3Q9UKA8 241 aa23.23■■□□□ 1.31
LIMS2-218ENST00000582671 FAM155AB1AL88 458 aaPredicted RBP23.22■■□□□ 1.31
LIMS2-218ENST00000582671 MAP2K2P36507 400 aa23.22■■□□□ 1.31
LIMS2-218ENST00000582671 SSH3Q8TE77 659 aa23.22■■□□□ 1.31
LIMS2-218ENST00000582671 DEFB129Q9H1M3 183 aa23.22■■□□□ 1.31
LIMS2-218ENST00000582671 A0A1B0GUL7 405 aa23.21■■□□□ 1.31
LIMS2-218ENST00000582671 MYO1BO43795 1136 aa23.21■■□□□ 1.31
LIMS2-218ENST00000582671 FKBP1BP68106 108 aa23.21■■□□□ 1.31
LIMS2-218ENST00000582671 MAP2K1Q02750 393 aaPredicted RBP23.21■■□□□ 1.31
LIMS2-218ENST00000582671 COL13A1Q5TAT6 717 aaPredicted RBP23.21■■□□□ 1.31
LIMS2-218ENST00000582671 CCDC102BQ68D86 513 aa23.21■■□□□ 1.31
LIMS2-218ENST00000582671 TDRD3Q9H7E2 651 aaKnown RBP23.21■■□□□ 1.31
LIMS2-218ENST00000582671 MYH2Q9UKX2 1941 aa23.21■■□□□ 1.31
LIMS2-218ENST00000582671 SSC5DA1L4H1 1573 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms