RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 MYH13Q9UKX3 1938 aa12.78□□□□□ -0.36
PPP4R1-220ENST00000581835 WNT10BO00744 389 aa12.78□□□□□ -0.36
PPP4R1-220ENST00000581835 CELF2O95319 508 aaKnown RBP12.78□□□□□ -0.36
PPP4R1-220ENST00000581835 IFIT1P09914 478 aaKnown RBP12.78□□□□□ -0.36
PPP4R1-220ENST00000581835 IL15P40933 162 aaPredicted RBP12.78□□□□□ -0.36
PPP4R1-220ENST00000581835 NBPF9Q3BBW0 867 aa12.78□□□□□ -0.36
PPP4R1-220ENST00000581835 CAVIN4Q5BKX8 364 aa12.78□□□□□ -0.36
PPP4R1-220ENST00000581835 ANGEL2Q5VTE6 544 aaKnown RBP12.78□□□□□ -0.36
PPP4R1-220ENST00000581835 DLK2Q6UY11 383 aa12.78□□□□□ -0.36
PPP4R1-220ENST00000581835 HDAC9Q9UKV0 1011 aa12.78□□□□□ -0.36
PPP4R1-220ENST00000581835 ABT1Q9ULW3 272 aaKnown RBP12.78□□□□□ -0.36
PPP4R1-220ENST00000581835 ECM29Q5VYK3 1845 aa12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 PNMA6EA0A0J9YXQ4 647 aa12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 RASSF10A6NK89 507 aa12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 ADM5C9JUS6 153 aa12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 ZBTB7BO15156 539 aaPredicted RBP12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 SLC5A1P13866 664 aa12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 BCAMP50895 628 aa12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 DEFB115Q30KQ5 88 aa12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 VPS37DQ86XT2 251 aa12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 ITPRIPQ8IWB1 547 aa12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 SULF1Q8IWU6 871 aa12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 LPIN2Q92539 896 aa12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 ZNF408Q9H9D4 720 aa12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 CEP126Q9P2H0 1117 aa12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 IQSEC3Q9UPP2 1182 aaPredicted RBP12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 TLL2Q9Y6L7 1015 aa12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 PITPNM2Q9BZ72 1349 aa12.77□□□□□ -0.37
PPP4R1-220ENST00000581835 ARAP2Q8WZ64 1704 aa12.76□□□□□ -0.37
PPP4R1-220ENST00000581835 VEGFBP49765 207 aa12.76□□□□□ -0.37
PPP4R1-220ENST00000581835 MFSD14BQ5SR56 506 aa12.76□□□□□ -0.37
PPP4R1-220ENST00000581835 ZBED3Q96IU2 234 aaPredicted RBP12.76□□□□□ -0.37
PPP4R1-220ENST00000581835 RCAN3Q9UKA8 241 aa12.76□□□□□ -0.37
PPP4R1-220ENST00000581835 F8W031 263 aaPredicted RBP12.75□□□□□ -0.37
PPP4R1-220ENST00000581835 FRAT2O75474 233 aaPredicted RBP12.75□□□□□ -0.37
PPP4R1-220ENST00000581835 ATP8B2P98198 1209 aa12.75□□□□□ -0.37
PPP4R1-220ENST00000581835 ATP2B3Q16720 1220 aa12.75□□□□□ -0.37
PPP4R1-220ENST00000581835 SAPCD2Q86UD0 394 aa12.75□□□□□ -0.37
PPP4R1-220ENST00000581835 MTMR14Q8NCE2 650 aa12.75□□□□□ -0.37
PPP4R1-220ENST00000581835 PANK1Q8TE04 598 aa12.75□□□□□ -0.37
PPP4R1-220ENST00000581835 SCAF8Q9UPN6 1271 aaKnown RBP12.75□□□□□ -0.37
PPP4R1-220ENST00000581835 MS4A1P11836 297 aa12.74□□□□□ -0.37
PPP4R1-220ENST00000581835 CHAF1AQ13111 956 aaPredicted RBP12.74□□□□□ -0.37
PPP4R1-220ENST00000581835 DLGAP5Q15398 846 aa12.74□□□□□ -0.37
PPP4R1-220ENST00000581835 CFAP100Q494V2 611 aa12.74□□□□□ -0.37
PPP4R1-220ENST00000581835 CDCA5Q96FF9 252 aa12.74□□□□□ -0.37
PPP4R1-220ENST00000581835 C1orf115Q9H7X2 142 aa12.74□□□□□ -0.37
PPP4R1-220ENST00000581835 PCDHAC2Q9Y5I4 1007 aa12.74□□□□□ -0.37
PPP4R1-220ENST00000581835 TIMM10P62072 90 aa12.73□□□□□ -0.37
PPP4R1-220ENST00000581835 TFCP2Q12800 502 aa12.73□□□□□ -0.37
PPP4R1-220ENST00000581835 POLA2Q14181 598 aa12.73□□□□□ -0.37
PPP4R1-220ENST00000581835 GRIK5Q16478 980 aa12.73□□□□□ -0.37
PPP4R1-220ENST00000581835 SSH3Q8TE77 659 aa12.73□□□□□ -0.37
PPP4R1-220ENST00000581835 TBC1D22AQ8WUA7 517 aa12.73□□□□□ -0.37
PPP4R1-220ENST00000581835 HHIPL1Q96JK4 782 aa12.73□□□□□ -0.37
PPP4R1-220ENST00000581835 PRMT6Q96LA8 375 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-220ENST00000581835 TTF2Q9UNY4 1162 aaKnown RBP12.73□□□□□ -0.37
PPP4R1-220ENST00000581835 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-220ENST00000581835 WDR33Q9C0J8 1336 aaKnown RBP12.72□□□□□ -0.37
PPP4R1-220ENST00000581835 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
PPP4R1-220ENST00000581835 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
PPP4R1-220ENST00000581835 G3BP1Q13283 466 aaKnown RBP eCLIP12.72□□□□□ -0.37
PPP4R1-220ENST00000581835 CYP4F22Q6NT55 531 aa12.72□□□□□ -0.37
PPP4R1-220ENST00000581835 GBA2Q9HCG7 927 aaPredicted RBP12.72□□□□□ -0.37
PPP4R1-220ENST00000581835 SERPINA10Q9UK55 444 aa12.72□□□□□ -0.37
PPP4R1-220ENST00000581835 AKAP2Q9Y2D5 859 aa12.72□□□□□ -0.37
PPP4R1-220ENST00000581835 A0A1B0GUL7 405 aa12.71□□□□□ -0.37
PPP4R1-220ENST00000581835 ZBTB22O15209 634 aa12.71□□□□□ -0.37
PPP4R1-220ENST00000581835 ADORA1P30542 326 aa12.71□□□□□ -0.37
PPP4R1-220ENST00000581835 ECE1P42892 770 aa12.71□□□□□ -0.37
PPP4R1-220ENST00000581835 PHKA1P46020 1223 aa12.71□□□□□ -0.37
PPP4R1-220ENST00000581835 RBM5P52756 815 aaKnown RBP eCLIP12.71□□□□□ -0.37
PPP4R1-220ENST00000581835 HUNKP57058 714 aa12.71□□□□□ -0.37
PPP4R1-220ENST00000581835 MVPQ14764 893 aaKnown RBP12.71□□□□□ -0.37
PPP4R1-220ENST00000581835 PRAMEF18Q5VWM3 479 aa12.71□□□□□ -0.37
PPP4R1-220ENST00000581835 CCDC102BQ68D86 513 aa12.71□□□□□ -0.37
PPP4R1-220ENST00000581835 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.37
PPP4R1-220ENST00000581835 APOBEC3FQ8IUX4 373 aaKnown RBP12.71□□□□□ -0.37
PPP4R1-220ENST00000581835 C2orf69Q8N8R5 385 aa12.71□□□□□ -0.37
PPP4R1-220ENST00000581835 CAPNS2Q96L46 248 aa12.71□□□□□ -0.37
PPP4R1-220ENST00000581835 COG6Q9Y2V7 657 aa12.71□□□□□ -0.37
PPP4R1-220ENST00000581835 COL1A1P02452 1464 aaPredicted RBP12.71□□□□□ -0.38
PPP4R1-220ENST00000581835 AOX1Q06278 1338 aa12.7□□□□□ -0.38
PPP4R1-220ENST00000581835 MYO1BO43795 1136 aa12.7□□□□□ -0.38
PPP4R1-220ENST00000581835 HSPA1AP0DMV8 641 aaKnown RBP12.7□□□□□ -0.38
PPP4R1-220ENST00000581835 HSPA1BP0DMV9 641 aaKnown RBP12.7□□□□□ -0.38
PPP4R1-220ENST00000581835 CEP85Q6P2H3 762 aa12.7□□□□□ -0.38
PPP4R1-220ENST00000581835 WDR66Q8TBY9 1149 aa12.7□□□□□ -0.38
PPP4R1-220ENST00000581835 XAGE2Q96GT9 111 aa12.7□□□□□ -0.38
PPP4R1-220ENST00000581835 MRIQ9BWK5 157 aa12.7□□□□□ -0.38
PPP4R1-220ENST00000581835 GNL3LQ9NVN8 582 aaKnown RBP12.7□□□□□ -0.38
PPP4R1-220ENST00000581835 DDX19BQ9UMR2 479 aa12.7□□□□□ -0.38
PPP4R1-220ENST00000581835 SUGT1Q9Y2Z0 365 aa12.7□□□□□ -0.38
PPP4R1-220ENST00000581835 THSD7BQ9C0I4 1608 aa12.7□□□□□ -0.38
PPP4R1-220ENST00000581835 CLRN2A0PK11 232 aa12.69□□□□□ -0.38
PPP4R1-220ENST00000581835 SEMA3EO15041 775 aa12.69□□□□□ -0.38
PPP4R1-220ENST00000581835 SURF6O75683 361 aaKnown RBP12.69□□□□□ -0.38
PPP4R1-220ENST00000581835 CRKP46108 304 aa12.69□□□□□ -0.38
PPP4R1-220ENST00000581835 HDLBPQ00341 1268 aaKnown RBP12.69□□□□□ -0.38
PPP4R1-220ENST00000581835 GRM1Q13255 1194 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms