RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 WDR33Q9C0J8 1336 aaKnown RBP24.34■■□□□ 1.49
SREBF1-220ENST00000581707 WNT10BO00744 389 aa24.33■■□□□ 1.49
SREBF1-220ENST00000581707 HSPA1AP0DMV8 641 aaKnown RBP24.33■■□□□ 1.49
SREBF1-220ENST00000581707 HSPA1BP0DMV9 641 aaKnown RBP24.33■■□□□ 1.49
SREBF1-220ENST00000581707 CAVIN4Q5BKX8 364 aa24.33■■□□□ 1.49
SREBF1-220ENST00000581707 FBXO33Q7Z6M2 555 aa24.33■■□□□ 1.49
SREBF1-220ENST00000581707 SIL1Q9H173 461 aa24.33■■□□□ 1.49
SREBF1-220ENST00000581707 FBXO3Q9UK99 471 aa24.33■■□□□ 1.49
SREBF1-220ENST00000581707 FAM205AQ6ZU69 1335 aa24.33■■□□□ 1.48
SREBF1-220ENST00000581707 ECE1P42892 770 aa24.32■■□□□ 1.48
SREBF1-220ENST00000581707 PUM3Q15397 648 aaKnown RBP24.32■■□□□ 1.48
SREBF1-220ENST00000581707 ATG9AQ7Z3C6 839 aa24.32■■□□□ 1.48
SREBF1-220ENST00000581707 CAPNS2Q96L46 248 aa24.32■■□□□ 1.48
SREBF1-220ENST00000581707 CIAO1O76071 339 aa24.31■■□□□ 1.48
SREBF1-220ENST00000581707 CYP4F22Q6NT55 531 aa24.31■■□□□ 1.48
SREBF1-220ENST00000581707 HHIPL1Q96JK4 782 aa24.31■■□□□ 1.48
SREBF1-220ENST00000581707 F8W031 263 aaPredicted RBP24.3■■□□□ 1.48
SREBF1-220ENST00000581707 IFIT1P09914 478 aaKnown RBP24.3■■□□□ 1.48
SREBF1-220ENST00000581707 FGFR2P21802 821 aa24.3■■□□□ 1.48
SREBF1-220ENST00000581707 GRM1Q13255 1194 aa24.3■■□□□ 1.48
SREBF1-220ENST00000581707 TMEM57Q8N5G2 664 aa24.3■■□□□ 1.48
SREBF1-220ENST00000581707 C2orf69Q8N8R5 385 aa24.3■■□□□ 1.48
SREBF1-220ENST00000581707 CDCA5Q96FF9 252 aa24.3■■□□□ 1.48
SREBF1-220ENST00000581707 DLGAP5Q15398 846 aa24.29■■□□□ 1.48
SREBF1-220ENST00000581707 MFSD14BQ5SR56 506 aa24.29■■□□□ 1.48
SREBF1-220ENST00000581707 ZBED3Q96IU2 234 aaPredicted RBP24.29■■□□□ 1.48
SREBF1-220ENST00000581707 GBA2Q9HCG7 927 aaPredicted RBP24.29■■□□□ 1.48
SREBF1-220ENST00000581707 COPRSQ9NQ92 184 aa24.29■■□□□ 1.48
SREBF1-220ENST00000581707 CEP126Q9P2H0 1117 aa24.29■■□□□ 1.48
SREBF1-220ENST00000581707 SCAF8Q9UPN6 1271 aaKnown RBP24.29■■□□□ 1.48
SREBF1-220ENST00000581707 PA2G4Q9UQ80 394 aaKnown RBP24.29■■□□□ 1.48
SREBF1-220ENST00000581707 FRAT2O75474 233 aaPredicted RBP24.28■■□□□ 1.48
SREBF1-220ENST00000581707 GNAI2P04899 355 aa24.28■■□□□ 1.48
SREBF1-220ENST00000581707 SLC5A1P13866 664 aa24.28■■□□□ 1.48
SREBF1-220ENST00000581707 BCAMP50895 628 aa24.28■■□□□ 1.48
SREBF1-220ENST00000581707 HUNKP57058 714 aa24.28■■□□□ 1.48
SREBF1-220ENST00000581707 MTMR14Q8NCE2 650 aa24.28■■□□□ 1.48
SREBF1-220ENST00000581707 LPIN2Q92539 896 aa24.28■■□□□ 1.48
SREBF1-220ENST00000581707 IQSEC3Q9UPP2 1182 aaPredicted RBP24.28■■□□□ 1.48
SREBF1-220ENST00000581707 SRGAP3O43295 1099 aa24.27■■□□□ 1.48
SREBF1-220ENST00000581707 IL15P40933 162 aaPredicted RBP24.27■■□□□ 1.48
SREBF1-220ENST00000581707 MTX1Q13505 466 aa24.27■■□□□ 1.48
SREBF1-220ENST00000581707 FTSJ3Q8IY81 847 aaKnown RBP24.27■■□□□ 1.48
SREBF1-220ENST00000581707 CFAP100Q494V2 611 aa24.26■■□□□ 1.47
SREBF1-220ENST00000581707 DZIP1LQ8IYY4 767 aaKnown RBP24.26■■□□□ 1.47
SREBF1-220ENST00000581707 CHAF1AQ13111 956 aaPredicted RBP24.25■■□□□ 1.47
SREBF1-220ENST00000581707 APOBEC3FQ8IUX4 373 aaKnown RBP24.25■■□□□ 1.47
SREBF1-220ENST00000581707 WBP1LQ9NX94 342 aa24.25■■□□□ 1.47
SREBF1-220ENST00000581707 MAP2K1Q02750 393 aaPredicted RBP24.24■■□□□ 1.47
SREBF1-220ENST00000581707 ATP2B3Q16720 1220 aa24.24■■□□□ 1.47
SREBF1-220ENST00000581707 PRAMEF18Q5VWM3 479 aa24.24■■□□□ 1.47
SREBF1-220ENST00000581707 AIDAQ96BJ3 306 aa24.24■■□□□ 1.47
SREBF1-220ENST00000581707 TTF2Q9UNY4 1162 aaKnown RBP24.24■■□□□ 1.47
SREBF1-220ENST00000581707 PCDHAC2Q9Y5I4 1007 aa24.24■■□□□ 1.47
SREBF1-220ENST00000581707 SPDYE2BA6NHP3 402 aa24.23■■□□□ 1.47
SREBF1-220ENST00000581707 AOC2O75106 756 aa24.23■■□□□ 1.47
SREBF1-220ENST00000581707 SPDYE6P0CI01 402 aa24.23■■□□□ 1.47
SREBF1-220ENST00000581707 MAP2K2P36507 400 aa24.23■■□□□ 1.47
SREBF1-220ENST00000581707 RBM5P52756 815 aaKnown RBP eCLIP24.23■■□□□ 1.47
SREBF1-220ENST00000581707 TBC1D22AQ8WUA7 517 aa24.23■■□□□ 1.47
SREBF1-220ENST00000581707 PRMT6Q96LA8 375 aaPredicted RBP24.23■■□□□ 1.47
SREBF1-220ENST00000581707 MYO1BO43795 1136 aa24.22■■□□□ 1.47
SREBF1-220ENST00000581707 RLBP1P12271 317 aa24.22■■□□□ 1.47
SREBF1-220ENST00000581707 ARAP2Q8WZ64 1704 aa24.21■■□□□ 1.47
SREBF1-220ENST00000581707 THSD7BQ9C0I4 1608 aa24.21■■□□□ 1.47
SREBF1-220ENST00000581707 FOXN1O15353 648 aa24.21■■□□□ 1.47
SREBF1-220ENST00000581707 FKBP1BP68106 108 aa24.21■■□□□ 1.47
SREBF1-220ENST00000581707 RGMBQ6NW40 437 aa24.21■■□□□ 1.47
SREBF1-220ENST00000581707 ITPRIPQ8IWB1 547 aa24.21■■□□□ 1.47
SREBF1-220ENST00000581707 SERPINA10Q9UK55 444 aa24.21■■□□□ 1.47
SREBF1-220ENST00000581707 ECM29Q5VYK3 1845 aa24.21■■□□□ 1.47
SREBF1-220ENST00000581707 PNMA6EA0A0J9YXQ4 647 aa24.19■■□□□ 1.46
SREBF1-220ENST00000581707 CLRN2A0PK11 232 aa24.19■■□□□ 1.46
SREBF1-220ENST00000581707 NF2P35240 595 aa24.19■■□□□ 1.46
SREBF1-220ENST00000581707 ZNF157P51786 506 aaPredicted RBP24.19■■□□□ 1.46
SREBF1-220ENST00000581707 GRIK5Q16478 980 aa24.19■■□□□ 1.46
SREBF1-220ENST00000581707 DEFB129Q9H1M3 183 aa24.19■■□□□ 1.46
SREBF1-220ENST00000581707 MYH13Q9UKX3 1938 aa24.18■■□□□ 1.46
SREBF1-220ENST00000581707 COL13A1Q5TAT6 717 aaPredicted RBP24.18■■□□□ 1.46
SREBF1-220ENST00000581707 CCDC102AQ96A19 550 aa24.18■■□□□ 1.46
SREBF1-220ENST00000581707 GNL3LQ9NVN8 582 aaKnown RBP24.18■■□□□ 1.46
SREBF1-220ENST00000581707 PAPPA2Q9BXP8 1791 aa24.18■■□□□ 1.46
SREBF1-220ENST00000581707 AOX1Q06278 1338 aa24.17■■□□□ 1.46
SREBF1-220ENST00000581707 ZBTB7BO15156 539 aaPredicted RBP24.17■■□□□ 1.46
SREBF1-220ENST00000581707 CRKP46108 304 aa24.17■■□□□ 1.46
SREBF1-220ENST00000581707 CTCFP49711 727 aaPredicted RBP24.17■■□□□ 1.46
SREBF1-220ENST00000581707 TFCP2Q12800 502 aa24.17■■□□□ 1.46
SREBF1-220ENST00000581707 NOGQ13253 232 aa24.17■■□□□ 1.46
SREBF1-220ENST00000581707 BEGAINQ9BUH8 593 aa24.17■■□□□ 1.46
SREBF1-220ENST00000581707 VEZTQ9HBM0 779 aa24.17■■□□□ 1.46
SREBF1-220ENST00000581707 AKAP2Q9Y2D5 859 aa24.17■■□□□ 1.46
SREBF1-220ENST00000581707 SUGT1Q9Y2Z0 365 aa24.17■■□□□ 1.46
SREBF1-220ENST00000581707 COL1A1P02452 1464 aaPredicted RBP24.16■■□□□ 1.46
SREBF1-220ENST00000581707 TIMM10P62072 90 aa24.16■■□□□ 1.46
SREBF1-220ENST00000581707 HDLBPQ00341 1268 aaKnown RBP24.16■■□□□ 1.46
SREBF1-220ENST00000581707 TTLL12Q14166 644 aaPredicted RBP24.16■■□□□ 1.46
SREBF1-220ENST00000581707 MOB2Q70IA6 237 aa24.16■■□□□ 1.46
SREBF1-220ENST00000581707 WDR66Q8TBY9 1149 aa24.16■■□□□ 1.46
SREBF1-220ENST00000581707 FAM155AB1AL88 458 aaPredicted RBP24.15■■□□□ 1.46
SREBF1-220ENST00000581707 UBE2Q2LH0YL09 131 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms