RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MSMPQ1L6U9 139 aa7.8□□□□□ -1.16
SMCHD1-206ENST00000581631 SGO2Q562F6 1265 aa7.8□□□□□ -1.16
SMCHD1-206ENST00000581631 NFXL1Q6ZNB6 911 aa7.8□□□□□ -1.16
SMCHD1-206ENST00000581631 NXPE3Q969Y0 559 aa7.8□□□□□ -1.16
SMCHD1-206ENST00000581631 PBXIP1Q96AQ6 731 aa7.8□□□□□ -1.16
SMCHD1-206ENST00000581631 KCNF1Q9H3M0 494 aa7.8□□□□□ -1.16
SMCHD1-206ENST00000581631 FAM177BA6PVY3 158 aa7.79□□□□□ -1.16
SMCHD1-206ENST00000581631 WDR64B1ANS9 1081 aa7.79□□□□□ -1.16
SMCHD1-206ENST00000581631 DLGAP3O95886 979 aa7.79□□□□□ -1.16
SMCHD1-206ENST00000581631 MAP4P27816 1152 aaKnown RBP7.79□□□□□ -1.16
SMCHD1-206ENST00000581631 C19orf57Q0VDD7 668 aa7.79□□□□□ -1.16
SMCHD1-206ENST00000581631 FDX2Q6P4F2 183 aa7.79□□□□□ -1.16
SMCHD1-206ENST00000581631 SMG8Q8ND04 991 aaKnown RBP7.79□□□□□ -1.16
SMCHD1-206ENST00000581631 SLC7A3Q8WY07 619 aa7.79□□□□□ -1.16
SMCHD1-206ENST00000581631 SUGCTQ9HAC7 445 aa7.79□□□□□ -1.16
SMCHD1-206ENST00000581631 F13BP05160 661 aa7.78□□□□□ -1.16
SMCHD1-206ENST00000581631 YBX3P16989 372 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMCHD1-206ENST00000581631 MZF1P28698 734 aaPredicted RBP7.78□□□□□ -1.16
SMCHD1-206ENST00000581631 MFSD14AQ96MC6 490 aa7.78□□□□□ -1.16
SMCHD1-206ENST00000581631 ZKSCAN3Q9BRR0 538 aa7.78□□□□□ -1.16
SMCHD1-206ENST00000581631 SOX17Q9H6I2 414 aaPredicted RBP7.78□□□□□ -1.16
SMCHD1-206ENST00000581631 PIM2Q9P1W9 311 aa7.78□□□□□ -1.16
SMCHD1-206ENST00000581631 RNF114Q9Y508 228 aa7.78□□□□□ -1.16
SMCHD1-206ENST00000581631 LOC100289279A0A1B0GTE1 492 aa7.77□□□□□ -1.17
SMCHD1-206ENST00000581631 DNM1Q05193 864 aaKnown RBP7.77□□□□□ -1.17
SMCHD1-206ENST00000581631 NOM1Q5C9Z4 860 aaKnown RBP7.77□□□□□ -1.17
SMCHD1-206ENST00000581631 SHISA5Q8N114 240 aa7.77□□□□□ -1.17
SMCHD1-206ENST00000581631 BSNDQ8WZ55 320 aa7.77□□□□□ -1.17
SMCHD1-206ENST00000581631 PMEPA1Q969W9 287 aa7.77□□□□□ -1.17
SMCHD1-206ENST00000581631 BHLHE41Q9C0J9 482 aaPredicted RBP7.77□□□□□ -1.17
SMCHD1-206ENST00000581631 NRSN2Q9GZP1 204 aa7.77□□□□□ -1.17
SMCHD1-206ENST00000581631 ARID1BQ8NFD5 2236 aaPredicted RBP7.76□□□□□ -1.17
SMCHD1-206ENST00000581631 EREGO14944 169 aa7.76□□□□□ -1.17
SMCHD1-206ENST00000581631 PRNPP04156 253 aa7.76□□□□□ -1.17
SMCHD1-206ENST00000581631 NPR3P17342 541 aa7.76□□□□□ -1.17
SMCHD1-206ENST00000581631 MPSTP25325 297 aa7.76□□□□□ -1.17
SMCHD1-206ENST00000581631 EIF1AXP47813 144 aaKnown RBP7.76□□□□□ -1.17
SMCHD1-206ENST00000581631 OSMRQ99650 979 aa7.76□□□□□ -1.17
SMCHD1-206ENST00000581631 GAS2O43903 313 aaKnown RBP7.75□□□□□ -1.17
SMCHD1-206ENST00000581631 CPSF6Q16630 551 aaKnown RBP eCLIP7.75□□□□□ -1.17
SMCHD1-206ENST00000581631 CBLL1Q75N03 491 aa7.75□□□□□ -1.17
SMCHD1-206ENST00000581631 ABI1Q8IZP0 508 aa7.75□□□□□ -1.17
SMCHD1-206ENST00000581631 TNFRSF21O75509 655 aa7.74□□□□□ -1.17
SMCHD1-206ENST00000581631 ESRRAP11474 423 aaPredicted RBP7.74□□□□□ -1.17
SMCHD1-206ENST00000581631 FOSL1P15407 271 aa7.74□□□□□ -1.17
SMCHD1-206ENST00000581631 ARL4DP49703 201 aa7.74□□□□□ -1.17
SMCHD1-206ENST00000581631 IKBKEQ14164 716 aa7.74□□□□□ -1.17
SMCHD1-206ENST00000581631 PEAR1Q5VY43 1037 aaPredicted RBP7.74□□□□□ -1.17
SMCHD1-206ENST00000581631 POLIQ9UNA4 740 aa7.74□□□□□ -1.17
SMCHD1-206ENST00000581631 PCSK2P16519 638 aa7.73□□□□□ -1.17
SMCHD1-206ENST00000581631 C8orf34Q49A92 452 aa7.73□□□□□ -1.17
SMCHD1-206ENST00000581631 NUTM2GQ5VZR2 741 aa7.73□□□□□ -1.17
SMCHD1-206ENST00000581631 CDPF1Q6NVV7 123 aa7.73□□□□□ -1.17
SMCHD1-206ENST00000581631 C2CD4AQ8NCU7 369 aaPredicted RBP7.73□□□□□ -1.17
SMCHD1-206ENST00000581631 EZH1Q92800 747 aaPredicted RBP7.73□□□□□ -1.17
SMCHD1-206ENST00000581631 GATA6Q92908 595 aa7.73□□□□□ -1.17
SMCHD1-206ENST00000581631 CCDC39Q9UFE4 941 aa7.73□□□□□ -1.17
SMCHD1-206ENST00000581631 COL19A1Q14993 1142 aa7.72□□□□□ -1.17
SMCHD1-206ENST00000581631 GTF3C2Q8WUA4 911 aaPredicted RBP7.72□□□□□ -1.17
SMCHD1-206ENST00000581631 CYP4F12Q9HCS2 524 aa7.72□□□□□ -1.17
SMCHD1-206ENST00000581631 FOXD3Q9UJU5 478 aaPredicted RBP7.72□□□□□ -1.17
SMCHD1-206ENST00000581631 TMEM88BA6NKF7 163 aa7.71□□□□□ -1.18
SMCHD1-206ENST00000581631 EDN3P14138 238 aa7.71□□□□□ -1.18
SMCHD1-206ENST00000581631 DRD2P14416 443 aa7.71□□□□□ -1.18
SMCHD1-206ENST00000581631 ADMP35318 185 aa7.71□□□□□ -1.18
SMCHD1-206ENST00000581631 C12orf50Q8NA57 414 aaPredicted RBP7.71□□□□□ -1.18
SMCHD1-206ENST00000581631 SNX29Q8TEQ0 813 aa7.71□□□□□ -1.18
SMCHD1-206ENST00000581631 USP26Q9BXU7 913 aa7.71□□□□□ -1.18
SMCHD1-206ENST00000581631 LATS2Q9NRM7 1088 aa7.71□□□□□ -1.18
SMCHD1-206ENST00000581631 ATG3Q9NT62 314 aa7.71□□□□□ -1.18
SMCHD1-206ENST00000581631 LEMD3Q9Y2U8 911 aa7.71□□□□□ -1.18
SMCHD1-206ENST00000581631 FAM95CA0A1B0GW59 222 aa7.7□□□□□ -1.18
SMCHD1-206ENST00000581631 PHACTR2O75167 634 aa7.7□□□□□ -1.18
SMCHD1-206ENST00000581631 SSFA2P28290 1259 aa7.7□□□□□ -1.18
SMCHD1-206ENST00000581631 MTMR3Q13615 1198 aa7.7□□□□□ -1.18
SMCHD1-206ENST00000581631 EXOSC6Q5RKV6 272 aaKnown RBP7.7□□□□□ -1.18
SMCHD1-206ENST00000581631 FBXL6Q8N531 539 aa7.7□□□□□ -1.18
SMCHD1-206ENST00000581631 OSBPL1AQ9BXW6 950 aa7.7□□□□□ -1.18
SMCHD1-206ENST00000581631 PRKAG2Q9UGJ0 569 aa7.7□□□□□ -1.18
SMCHD1-206ENST00000581631 FZD6O60353 706 aa7.69□□□□□ -1.18
SMCHD1-206ENST00000581631 RXRBP28702 533 aa7.69□□□□□ -1.18
SMCHD1-206ENST00000581631 ALKBH2Q6NS38 261 aa7.69□□□□□ -1.18
SMCHD1-206ENST00000581631 ZAR1Q86SH2 424 aa7.69□□□□□ -1.18
SMCHD1-206ENST00000581631 GIMAP7Q8NHV1 300 aa7.69□□□□□ -1.18
SMCHD1-206ENST00000581631 FBLIM1Q8WUP2 373 aa7.69□□□□□ -1.18
SMCHD1-206ENST00000581631 METTL12A8MUP2 240 aa7.68□□□□□ -1.18
SMCHD1-206ENST00000581631 CTSBP07858 339 aa7.68□□□□□ -1.18
SMCHD1-206ENST00000581631 SOX4Q06945 474 aaPredicted RBP7.68□□□□□ -1.18
SMCHD1-206ENST00000581631 LCE1DQ5T752 114 aa7.68□□□□□ -1.18
SMCHD1-206ENST00000581631 VSIG10LQ86VR7 867 aa7.68□□□□□ -1.18
SMCHD1-206ENST00000581631 GJD3Q8N144 294 aa7.68□□□□□ -1.18
SMCHD1-206ENST00000581631 METTL22Q9BUU2 404 aaPredicted RBP7.68□□□□□ -1.18
SMCHD1-206ENST00000581631 ADH5P11766 374 aa7.67□□□□□ -1.18
SMCHD1-206ENST00000581631 ITGB5P18084 799 aa7.67□□□□□ -1.18
SMCHD1-206ENST00000581631 NFKBIBQ15653 356 aa7.67□□□□□ -1.18
SMCHD1-206ENST00000581631 PAOXQ6QHF9 649 aa7.67□□□□□ -1.18
SMCHD1-206ENST00000581631 ASAP3Q8TDY4 903 aa7.67□□□□□ -1.18
SMCHD1-206ENST00000581631 AMOTL2Q9Y2J4 779 aa7.67□□□□□ -1.18
SMCHD1-206ENST00000581631 EHHADHQ08426 723 aa7.66□□□□□ -1.18
SMCHD1-206ENST00000581631 PHLDB3Q6NSJ2 640 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms