RNA–Protein interactions for RNA: ENST00000581166.5

SUPT4H1-205, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-205ENST00000581166 NBPF9Q3BBW0 867 aa17.54■□□□□ 0.4
SUPT4H1-205ENST00000581166 ATG9AQ7Z3C6 839 aa17.54■□□□□ 0.4
SUPT4H1-205ENST00000581166 FBXO33Q7Z6M2 555 aa17.54■□□□□ 0.4
SUPT4H1-205ENST00000581166 HHIPL1Q96JK4 782 aa17.54■□□□□ 0.4
SUPT4H1-205ENST00000581166 CIAO1O76071 339 aa17.53■□□□□ 0.4
SUPT4H1-205ENST00000581166 HSPA1AP0DMV8 641 aaKnown RBP17.53■□□□□ 0.4
SUPT4H1-205ENST00000581166 HSPA1BP0DMV9 641 aaKnown RBP17.53■□□□□ 0.4
SUPT4H1-205ENST00000581166 PUM3Q15397 648 aaKnown RBP17.53■□□□□ 0.4
SUPT4H1-205ENST00000581166 CAVIN4Q5BKX8 364 aa17.53■□□□□ 0.4
SUPT4H1-205ENST00000581166 VPS37DQ86XT2 251 aa17.53■□□□□ 0.4
SUPT4H1-205ENST00000581166 FGFR2P21802 821 aa17.52■□□□□ 0.4
SUPT4H1-205ENST00000581166 ECE1P42892 770 aa17.52■□□□□ 0.4
SUPT4H1-205ENST00000581166 ZBED3Q96IU2 234 aaPredicted RBP17.52■□□□□ 0.4
SUPT4H1-205ENST00000581166 CAPNS2Q96L46 248 aa17.52■□□□□ 0.4
SUPT4H1-205ENST00000581166 SIL1Q9H173 461 aa17.52■□□□□ 0.4
SUPT4H1-205ENST00000581166 IFIT1P09914 478 aaKnown RBP17.51■□□□□ 0.39
SUPT4H1-205ENST00000581166 MTX1Q13505 466 aa17.51■□□□□ 0.39
SUPT4H1-205ENST00000581166 CYP4F22Q6NT55 531 aa17.51■□□□□ 0.39
SUPT4H1-205ENST00000581166 PAXIP1Q6ZW49 1069 aaPredicted RBP17.51■□□□□ 0.39
SUPT4H1-205ENST00000581166 TMEM57Q8N5G2 664 aa17.51■□□□□ 0.39
SUPT4H1-205ENST00000581166 CDCA5Q96FF9 252 aa17.51■□□□□ 0.39
SUPT4H1-205ENST00000581166 COPRSQ9NQ92 184 aa17.51■□□□□ 0.39
SUPT4H1-205ENST00000581166 JAG2Q9Y219 1238 aa17.51■□□□□ 0.39
SUPT4H1-205ENST00000581166 DLGAP5Q15398 846 aa17.5■□□□□ 0.39
SUPT4H1-205ENST00000581166 MFSD14BQ5SR56 506 aa17.5■□□□□ 0.39
SUPT4H1-205ENST00000581166 C2orf69Q8N8R5 385 aa17.5■□□□□ 0.39
SUPT4H1-205ENST00000581166 MTMR14Q8NCE2 650 aa17.5■□□□□ 0.39
SUPT4H1-205ENST00000581166 LPIN2Q92539 896 aa17.5■□□□□ 0.39
SUPT4H1-205ENST00000581166 GBA2Q9HCG7 927 aaPredicted RBP17.5■□□□□ 0.39
SUPT4H1-205ENST00000581166 F8W031 263 aaPredicted RBP17.49■□□□□ 0.39
SUPT4H1-205ENST00000581166 GNAI2P04899 355 aa17.49■□□□□ 0.39
SUPT4H1-205ENST00000581166 SLC5A1P13866 664 aa17.49■□□□□ 0.39
SUPT4H1-205ENST00000581166 IL15P40933 162 aaPredicted RBP17.49■□□□□ 0.39
SUPT4H1-205ENST00000581166 CEP126Q9P2H0 1117 aa17.49■□□□□ 0.39
SUPT4H1-205ENST00000581166 PA2G4Q9UQ80 394 aaKnown RBP17.49■□□□□ 0.39
SUPT4H1-205ENST00000581166 SRGAP3O43295 1099 aa17.48■□□□□ 0.39
SUPT4H1-205ENST00000581166 FRAT2O75474 233 aaPredicted RBP17.48■□□□□ 0.39
SUPT4H1-205ENST00000581166 BCAMP50895 628 aa17.48■□□□□ 0.39
SUPT4H1-205ENST00000581166 HUNKP57058 714 aa17.48■□□□□ 0.39
SUPT4H1-205ENST00000581166 FTSJ3Q8IY81 847 aaKnown RBP17.48■□□□□ 0.39
SUPT4H1-205ENST00000581166 DZIP1LQ8IYY4 767 aaKnown RBP17.48■□□□□ 0.39
SUPT4H1-205ENST00000581166 IQSEC3Q9UPP2 1182 aaPredicted RBP17.48■□□□□ 0.39
SUPT4H1-205ENST00000581166 THSD7BQ9C0I4 1608 aa17.48■□□□□ 0.39
SUPT4H1-205ENST00000581166 ARAP2Q8WZ64 1704 aa17.48■□□□□ 0.39
SUPT4H1-205ENST00000581166 GRM1Q13255 1194 aa17.47■□□□□ 0.39
SUPT4H1-205ENST00000581166 CFAP100Q494V2 611 aa17.47■□□□□ 0.39
SUPT4H1-205ENST00000581166 APOBEC3FQ8IUX4 373 aaKnown RBP17.47■□□□□ 0.39
SUPT4H1-205ENST00000581166 WBP1LQ9NX94 342 aa17.47■□□□□ 0.39
SUPT4H1-205ENST00000581166 SCAF8Q9UPN6 1271 aaKnown RBP17.47■□□□□ 0.39
SUPT4H1-205ENST00000581166 MAP2K2P36507 400 aa17.47■□□□□ 0.39
SUPT4H1-205ENST00000581166 MAP2K1Q02750 393 aaPredicted RBP17.47■□□□□ 0.39
SUPT4H1-205ENST00000581166 ATP2B3Q16720 1220 aa17.47■□□□□ 0.39
SUPT4H1-205ENST00000581166 TBC1D22AQ8WUA7 517 aa17.47■□□□□ 0.39
SUPT4H1-205ENST00000581166 TTF2Q9UNY4 1162 aaKnown RBP17.47■□□□□ 0.39
SUPT4H1-205ENST00000581166 ECM29Q5VYK3 1845 aa17.47■□□□□ 0.39
SUPT4H1-205ENST00000581166 SPDYE2BA6NHP3 402 aa17.46■□□□□ 0.39
SUPT4H1-205ENST00000581166 MYO1BO43795 1136 aa17.46■□□□□ 0.39
SUPT4H1-205ENST00000581166 SPDYE6P0CI01 402 aa17.46■□□□□ 0.39
SUPT4H1-205ENST00000581166 FKBP1BP68106 108 aa17.46■□□□□ 0.39
SUPT4H1-205ENST00000581166 CHAF1AQ13111 956 aaPredicted RBP17.46■□□□□ 0.39
SUPT4H1-205ENST00000581166 PCDHAC2Q9Y5I4 1007 aa17.46■□□□□ 0.39
SUPT4H1-205ENST00000581166 RLBP1P12271 317 aa17.45■□□□□ 0.38
SUPT4H1-205ENST00000581166 RBM5P52756 815 aaKnown RBP eCLIP17.45■□□□□ 0.38
SUPT4H1-205ENST00000581166 PRAMEF18Q5VWM3 479 aa17.45■□□□□ 0.38
SUPT4H1-205ENST00000581166 RGMBQ6NW40 437 aa17.45■□□□□ 0.38
SUPT4H1-205ENST00000581166 AIDAQ96BJ3 306 aa17.45■□□□□ 0.38
SUPT4H1-205ENST00000581166 PRMT6Q96LA8 375 aaPredicted RBP17.45■□□□□ 0.38
SUPT4H1-205ENST00000581166 SERPINA10Q9UK55 444 aa17.45■□□□□ 0.38
SUPT4H1-205ENST00000581166 FOXN1O15353 648 aa17.44■□□□□ 0.38
SUPT4H1-205ENST00000581166 AOC2O75106 756 aa17.44■□□□□ 0.38
SUPT4H1-205ENST00000581166 ITPRIPQ8IWB1 547 aa17.44■□□□□ 0.38
SUPT4H1-205ENST00000581166 PAPPA2Q9BXP8 1791 aa17.44■□□□□ 0.38
SUPT4H1-205ENST00000581166 COL1A1P02452 1464 aaPredicted RBP17.43■□□□□ 0.38
SUPT4H1-205ENST00000581166 PNMA6EA0A0J9YXQ4 647 aa17.43■□□□□ 0.38
SUPT4H1-205ENST00000581166 ZBTB7BO15156 539 aaPredicted RBP17.43■□□□□ 0.38
SUPT4H1-205ENST00000581166 NF2P35240 595 aa17.43■□□□□ 0.38
SUPT4H1-205ENST00000581166 SUGT1Q9Y2Z0 365 aa17.43■□□□□ 0.38
SUPT4H1-205ENST00000581166 MYH13Q9UKX3 1938 aa17.43■□□□□ 0.38
SUPT4H1-205ENST00000581166 CRKP46108 304 aa17.42■□□□□ 0.38
SUPT4H1-205ENST00000581166 HDLBPQ00341 1268 aaKnown RBP17.42■□□□□ 0.38
SUPT4H1-205ENST00000581166 NOGQ13253 232 aa17.42■□□□□ 0.38
SUPT4H1-205ENST00000581166 GRIK5Q16478 980 aa17.42■□□□□ 0.38
SUPT4H1-205ENST00000581166 WDR66Q8TBY9 1149 aa17.42■□□□□ 0.38
SUPT4H1-205ENST00000581166 CCDC102AQ96A19 550 aa17.42■□□□□ 0.38
SUPT4H1-205ENST00000581166 DEFB129Q9H1M3 183 aa17.42■□□□□ 0.38
SUPT4H1-205ENST00000581166 GNL3LQ9NVN8 582 aaKnown RBP17.42■□□□□ 0.38
SUPT4H1-205ENST00000581166 AKAP2Q9Y2D5 859 aa17.42■□□□□ 0.38
SUPT4H1-205ENST00000581166 CLRN2A0PK11 232 aa17.41■□□□□ 0.38
SUPT4H1-205ENST00000581166 FAM155AB1AL88 458 aaPredicted RBP17.41■□□□□ 0.38
SUPT4H1-205ENST00000581166 ZBTB22O15209 634 aa17.41■□□□□ 0.38
SUPT4H1-205ENST00000581166 MS4A1P11836 297 aa17.41■□□□□ 0.38
SUPT4H1-205ENST00000581166 CTCFP49711 727 aaPredicted RBP17.41■□□□□ 0.38
SUPT4H1-205ENST00000581166 ZNF157P51786 506 aaPredicted RBP17.41■□□□□ 0.38
SUPT4H1-205ENST00000581166 TFCP2Q12800 502 aa17.41■□□□□ 0.38
SUPT4H1-205ENST00000581166 COL13A1Q5TAT6 717 aaPredicted RBP17.41■□□□□ 0.38
SUPT4H1-205ENST00000581166 MRIQ9BWK5 157 aa17.41■□□□□ 0.38
SUPT4H1-205ENST00000581166 PPP2R3BQ9Y5P8 575 aa17.41■□□□□ 0.38
SUPT4H1-205ENST00000581166 AOX1Q06278 1338 aa17.41■□□□□ 0.38
SUPT4H1-205ENST00000581166 SEMA3EO15041 775 aa17.4■□□□□ 0.38
SUPT4H1-205ENST00000581166 TIMM10P62072 90 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms