RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 FKBP1BP68106 108 aa15.75■□□□□ 0.11
SENP3-204ENST00000580997 ALDH1L2Q3SY69 923 aa15.75■□□□□ 0.11
SENP3-204ENST00000580997 CCDC102AQ96A19 550 aa15.75■□□□□ 0.11
SENP3-204ENST00000580997 CDCA7LQ96GN5 454 aa15.75■□□□□ 0.11
SENP3-204ENST00000580997 ZBED3Q96IU2 234 aaPredicted RBP15.75■□□□□ 0.11
SENP3-204ENST00000580997 TAF7LQ5H9L4 462 aa15.74■□□□□ 0.11
SENP3-204ENST00000580997 FBXW7Q969H0 707 aa15.74■□□□□ 0.11
SENP3-204ENST00000580997 ZIC5Q96T25 663 aa15.74■□□□□ 0.11
SENP3-204ENST00000580997 CNNM1Q9NRU3 951 aa15.74■□□□□ 0.11
SENP3-204ENST00000580997 RIPOR2Q9Y4F9 1068 aa15.74■□□□□ 0.11
SENP3-204ENST00000580997 FKBP1AP62942 108 aaKnown RBP15.73■□□□□ 0.11
SENP3-204ENST00000580997 ZNF804AQ7Z570 1209 aa15.73■□□□□ 0.11
SENP3-204ENST00000580997 KIAA0825Q8IV33 1275 aa15.73■□□□□ 0.11
SENP3-204ENST00000580997 CERS5Q8N5B7 392 aa15.73■□□□□ 0.11
SENP3-204ENST00000580997 USP44Q9H0E7 712 aa15.73■□□□□ 0.11
SENP3-204ENST00000580997 BICC1Q9H694 974 aaKnown RBP15.73■□□□□ 0.11
SENP3-204ENST00000580997 PITPNM1O00562 1244 aa15.72■□□□□ 0.11
SENP3-204ENST00000580997 SASH1O94885 1247 aa15.72■□□□□ 0.11
SENP3-204ENST00000580997 CT47B1P0C2W7 299 aaPredicted RBP15.72■□□□□ 0.11
SENP3-204ENST00000580997 ZNF157P51786 506 aaPredicted RBP15.72■□□□□ 0.11
SENP3-204ENST00000580997 UBE4AQ14139 1066 aa15.72■□□□□ 0.11
SENP3-204ENST00000580997 ANKRD44Q8N8A2 993 aa15.72■□□□□ 0.11
SENP3-204ENST00000580997 MTMR14Q8NCE2 650 aa15.72■□□□□ 0.11
SENP3-204ENST00000580997 PUS3Q9BZE2 481 aaKnown RBP15.72■□□□□ 0.11
SENP3-204ENST00000580997 HDAC9Q9UKV0 1011 aa15.72■□□□□ 0.11
SENP3-204ENST00000580997 PLIN1O60240 522 aa15.71■□□□□ 0.11
SENP3-204ENST00000580997 SLC10A3P09131 477 aa15.71■□□□□ 0.11
SENP3-204ENST00000580997 SCAF8Q9UPN6 1271 aaKnown RBP15.71■□□□□ 0.11
SENP3-204ENST00000580997 FAM205AQ6ZU69 1335 aa15.7■□□□□ 0.1
SENP3-204ENST00000580997 MROH5Q6ZUA9 1318 aa15.7■□□□□ 0.1
SENP3-204ENST00000580997 A0A1B0GUL6 1792 aa15.7■□□□□ 0.1
SENP3-204ENST00000580997 TDRD7Q8NHU6 1098 aaKnown RBP15.7■□□□□ 0.1
SENP3-204ENST00000580997 FAM84BQ96KN1 310 aaPredicted RBP15.7■□□□□ 0.1
SENP3-204ENST00000580997 KIF23Q02241 960 aaPredicted RBP15.69■□□□□ 0.1
SENP3-204ENST00000580997 PRAMEF18Q5VWM3 479 aa15.69■□□□□ 0.1
SENP3-204ENST00000580997 SAGE1Q9NXZ1 904 aa15.69■□□□□ 0.1
SENP3-204ENST00000580997 TSKSQ9UJT2 592 aa15.69■□□□□ 0.1
SENP3-204ENST00000580997 PAPPA2Q9BXP8 1791 aa15.68■□□□□ 0.1
SENP3-204ENST00000580997 HIBADHP31937 336 aaKnown RBP15.68■□□□□ 0.1
SENP3-204ENST00000580997 DLGAP5Q15398 846 aa15.68■□□□□ 0.1
SENP3-204ENST00000580997 APOBEC3FQ8IUX4 373 aaKnown RBP15.68■□□□□ 0.1
SENP3-204ENST00000580997 VGLL2Q8N8G2 317 aa15.68■□□□□ 0.1
SENP3-204ENST00000580997 CSRNP1Q96S65 589 aa15.68■□□□□ 0.1
SENP3-204ENST00000580997 SMC4Q9NTJ3 1288 aa15.68■□□□□ 0.1
SENP3-204ENST00000580997 PDE8BO95263 885 aa15.67■□□□□ 0.1
SENP3-204ENST00000580997 GYG1P46976 350 aa15.67■□□□□ 0.1
SENP3-204ENST00000580997 LRRC24Q50LG9 513 aa15.67■□□□□ 0.1
SENP3-204ENST00000580997 MOB2Q70IA6 237 aa15.67■□□□□ 0.1
SENP3-204ENST00000580997 FBXO33Q7Z6M2 555 aa15.67■□□□□ 0.1
SENP3-204ENST00000580997 RASAL3Q86YV0 1011 aa15.67■□□□□ 0.1
SENP3-204ENST00000580997 PRMT6Q96LA8 375 aaPredicted RBP15.67■□□□□ 0.1
SENP3-204ENST00000580997 SPDYE2BA6NHP3 402 aa15.66■□□□□ 0.1
SENP3-204ENST00000580997 UBE2Q2LH0YL09 131 aa15.66■□□□□ 0.1
SENP3-204ENST00000580997 SPDYE6P0CI01 402 aa15.66■□□□□ 0.1
SENP3-204ENST00000580997 NF2P35240 595 aa15.66■□□□□ 0.1
SENP3-204ENST00000580997 DEFB129Q9H1M3 183 aa15.66■□□□□ 0.1
SENP3-204ENST00000580997 RNF186Q9NXI6 227 aa15.66■□□□□ 0.1
SENP3-204ENST00000580997 COL1A1P02452 1464 aaPredicted RBP15.65■□□□□ 0.1
SENP3-204ENST00000580997 RFX5P48382 616 aaPredicted RBP15.65■□□□□ 0.1
SENP3-204ENST00000580997 CFAP100Q494V2 611 aa15.65■□□□□ 0.1
SENP3-204ENST00000580997 MFSD14BQ5SR56 506 aa15.65■□□□□ 0.1
SENP3-204ENST00000580997 ABHD8Q96I13 439 aa15.65■□□□□ 0.1
SENP3-204ENST00000580997 SERPINA10Q9UK55 444 aa15.65■□□□□ 0.1
SENP3-204ENST00000580997 NOB1Q9ULX3 412 aaKnown RBP15.65■□□□□ 0.1
SENP3-204ENST00000580997 JAG2Q9Y219 1238 aa15.65■□□□□ 0.1
SENP3-204ENST00000580997 PCDHAC2Q9Y5I4 1007 aa15.65■□□□□ 0.1
SENP3-204ENST00000580997 PPP2R3BQ9Y5P8 575 aa15.65■□□□□ 0.1
SENP3-204ENST00000580997 F8W031 263 aaPredicted RBP15.64■□□□□ 0.09
SENP3-204ENST00000580997 MYO1BO43795 1136 aa15.64■□□□□ 0.09
SENP3-204ENST00000580997 METTL24Q5JXM2 366 aa15.64■□□□□ 0.09
SENP3-204ENST00000580997 LDLRAD1Q5T700 205 aa15.64■□□□□ 0.09
SENP3-204ENST00000580997 KLHDC4Q8TBB5 520 aa15.64■□□□□ 0.09
SENP3-204ENST00000580997 KIF16BQ96L93 1317 aa15.64■□□□□ 0.09
SENP3-204ENST00000580997 FGFR2P21802 821 aa15.63■□□□□ 0.09
SENP3-204ENST00000580997 RARSP54136 660 aaKnown RBP15.63■□□□□ 0.09
SENP3-204ENST00000580997 PTPN12Q05209 780 aaKnown RBP15.63■□□□□ 0.09
SENP3-204ENST00000580997 MAP3K11Q16584 847 aa15.63■□□□□ 0.09
SENP3-204ENST00000580997 CAVIN4Q5BKX8 364 aa15.63■□□□□ 0.09
SENP3-204ENST00000580997 ARHGAP45Q92619 1136 aa15.63■□□□□ 0.09
SENP3-204ENST00000580997 API5Q9BZZ5 524 aaKnown RBP15.63■□□□□ 0.09
SENP3-204ENST00000580997 UNCXA6NJT0 531 aa15.62■□□□□ 0.09
SENP3-204ENST00000580997 EYA2O00167 538 aa15.62■□□□□ 0.09
SENP3-204ENST00000580997 TRPA1O75762 1119 aa15.62■□□□□ 0.09
SENP3-204ENST00000580997 TM4SF4P48230 202 aa15.62■□□□□ 0.09
SENP3-204ENST00000580997 TTLL12Q14166 644 aaPredicted RBP15.62■□□□□ 0.09
SENP3-204ENST00000580997 ARMC9Q7Z3E5 817 aa15.62■□□□□ 0.09
SENP3-204ENST00000580997 FBXO3Q9UK99 471 aa15.62■□□□□ 0.09
SENP3-204ENST00000580997 TTF2Q9UNY4 1162 aaKnown RBP15.62■□□□□ 0.09
SENP3-204ENST00000580997 AOX1Q06278 1338 aa15.62■□□□□ 0.09
SENP3-204ENST00000580997 BCAMP50895 628 aa15.61■□□□□ 0.09
SENP3-204ENST00000580997 PUM3Q15397 648 aaKnown RBP15.61■□□□□ 0.09
SENP3-204ENST00000580997 ATG9AQ7Z3C6 839 aa15.61■□□□□ 0.09
SENP3-204ENST00000580997 VPS37DQ86XT2 251 aa15.61■□□□□ 0.09
SENP3-204ENST00000580997 MRIQ9BWK5 157 aa15.61■□□□□ 0.09
SENP3-204ENST00000580997 CLRN2A0PK11 232 aa15.6■□□□□ 0.09
SENP3-204ENST00000580997 UBTFL1P0CB47 393 aaPredicted RBP15.6■□□□□ 0.09
SENP3-204ENST00000580997 RBM5P52756 815 aaKnown RBP eCLIP15.6■□□□□ 0.09
SENP3-204ENST00000580997 HDLBPQ00341 1268 aaKnown RBP15.6■□□□□ 0.09
SENP3-204ENST00000580997 SUPT20HL1Q3ZLR7 823 aa15.6■□□□□ 0.09
SENP3-204ENST00000580997 TBC1D22AQ8WUA7 517 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms