RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 ANGEL1Q9UNK9 670 aaKnown RBP13.08□□□□□ -0.32
GGA3-210ENST00000580799 MANSC4A6NHS7 340 aaPredicted RBP13.07□□□□□ -0.32
GGA3-210ENST00000580799 PPP1R12BO60237 982 aaPredicted RBP13.07□□□□□ -0.32
GGA3-210ENST00000580799 FKTNO75072 461 aa13.07□□□□□ -0.32
GGA3-210ENST00000580799 VAMP4O75379 141 aa13.07□□□□□ -0.32
GGA3-210ENST00000580799 ZBTB48P10074 688 aaPredicted RBP13.07□□□□□ -0.32
GGA3-210ENST00000580799 IL1R1P14778 569 aa13.07□□□□□ -0.32
GGA3-210ENST00000580799 FOXO4P98177 505 aa13.07□□□□□ -0.32
GGA3-210ENST00000580799 MKRN3Q13064 507 aaKnown RBP13.07□□□□□ -0.32
GGA3-210ENST00000580799 PRKG1Q13976 671 aa13.07□□□□□ -0.32
GGA3-210ENST00000580799 FBXO46Q6PJ61 603 aaPredicted RBP13.07□□□□□ -0.32
GGA3-210ENST00000580799 CERS5Q8N5B7 392 aa13.07□□□□□ -0.32
GGA3-210ENST00000580799 PDE4DIPQ5VU43 2346 aa13.07□□□□□ -0.32
GGA3-210ENST00000580799 SPDYE2BA6NHP3 402 aa13.06□□□□□ -0.32
GGA3-210ENST00000580799 TAF5LO75529 589 aa13.06□□□□□ -0.32
GGA3-210ENST00000580799 SPDYE6P0CI01 402 aa13.06□□□□□ -0.32
GGA3-210ENST00000580799 SUPT20HL1Q3ZLR7 823 aa13.06□□□□□ -0.32
GGA3-210ENST00000580799 BEND3Q5T5X7 828 aa13.06□□□□□ -0.32
GGA3-210ENST00000580799 HELBQ8NG08 1087 aaPredicted RBP13.06□□□□□ -0.32
GGA3-210ENST00000580799 SLC10A4Q96EP9 437 aa13.06□□□□□ -0.32
GGA3-210ENST00000580799 CHMP3Q9Y3E7 222 aa13.06□□□□□ -0.32
GGA3-210ENST00000580799 SSC5DA1L4H1 1573 aa13.06□□□□□ -0.32
GGA3-210ENST00000580799 SNAP23O00161 211 aa13.05□□□□□ -0.32
GGA3-210ENST00000580799 EXOSC9Q06265 439 aaKnown RBP13.05□□□□□ -0.32
GGA3-210ENST00000580799 CCDC57Q2TAC2 916 aa13.05□□□□□ -0.32
GGA3-210ENST00000580799 CFAP100Q494V2 611 aa13.05□□□□□ -0.32
GGA3-210ENST00000580799 PRPF38BQ5VTL8 546 aaKnown RBP13.05□□□□□ -0.32
GGA3-210ENST00000580799 LMBR1LQ6UX01 489 aa13.05□□□□□ -0.32
GGA3-210ENST00000580799 LDHAL6AQ6ZMR3 332 aa13.05□□□□□ -0.32
GGA3-210ENST00000580799 PCDH10Q9P2E7 1040 aa13.05□□□□□ -0.32
GGA3-210ENST00000580799 ARAP2Q8WZ64 1704 aa13.05□□□□□ -0.32
GGA3-210ENST00000580799 F6X3S4 739 aa13.04□□□□□ -0.32
GGA3-210ENST00000580799 GRM8O00222 908 aa13.04□□□□□ -0.32
GGA3-210ENST00000580799 TAF7LQ5H9L4 462 aa13.04□□□□□ -0.32
GGA3-210ENST00000580799 IFNL1Q8IU54 200 aa13.04□□□□□ -0.32
GGA3-210ENST00000580799 PRMT6Q96LA8 375 aaPredicted RBP13.04□□□□□ -0.32
GGA3-210ENST00000580799 MRS2Q9HD23 443 aa13.04□□□□□ -0.32
GGA3-210ENST00000580799 CNNM1Q9NRU3 951 aa13.04□□□□□ -0.32
GGA3-210ENST00000580799 FAM205AQ6ZU69 1335 aa13.04□□□□□ -0.32
GGA3-210ENST00000580799 F8W031 263 aaPredicted RBP13.03□□□□□ -0.32
GGA3-210ENST00000580799 IREB2P48200 963 aaKnown RBP13.03□□□□□ -0.32
GGA3-210ENST00000580799 TNFAIP1Q13829 316 aa13.03□□□□□ -0.32
GGA3-210ENST00000580799 WNK4Q96J92 1243 aa13.03□□□□□ -0.32
GGA3-210ENST00000580799 C9orf78Q9NZ63 289 aaPredicted RBP13.03□□□□□ -0.32
GGA3-210ENST00000580799 CLRN2A0PK11 232 aa13.02□□□□□ -0.33
GGA3-210ENST00000580799 ALDH1L1O75891 902 aa13.02□□□□□ -0.33
GGA3-210ENST00000580799 RBM5P52756 815 aaKnown RBP eCLIP13.02□□□□□ -0.33
GGA3-210ENST00000580799 OTUD7BQ6GQQ9 843 aa13.02□□□□□ -0.33
GGA3-210ENST00000580799 ANKRD13AQ8IZ07 590 aa13.02□□□□□ -0.33
GGA3-210ENST00000580799 CLMNQ96JQ2 1002 aa13.02□□□□□ -0.33
GGA3-210ENST00000580799 R3HDMLQ9H3Y0 253 aa13.02□□□□□ -0.33
GGA3-210ENST00000580799 VEZTQ9HBM0 779 aa13.02□□□□□ -0.33
GGA3-210ENST00000580799 FZD1Q9UP38 647 aa13.02□□□□□ -0.33
GGA3-210ENST00000580799 PCDHAC2Q9Y5I4 1007 aa13.02□□□□□ -0.33
GGA3-210ENST00000580799 IGF2BP3O00425 579 aaKnown RBP eCLIP13.01□□□□□ -0.33
GGA3-210ENST00000580799 PLIN1O60240 522 aa13.01□□□□□ -0.33
GGA3-210ENST00000580799 UBE4AQ14139 1066 aa13.01□□□□□ -0.33
GGA3-210ENST00000580799 RASA3Q14644 834 aa13.01□□□□□ -0.33
GGA3-210ENST00000580799 EPHA10Q5JZY3 1008 aa13.01□□□□□ -0.33
GGA3-210ENST00000580799 MFSD14BQ5SR56 506 aa13.01□□□□□ -0.33
GGA3-210ENST00000580799 NBPF12Q5TAG4 269 aaPredicted RBP13.01□□□□□ -0.33
GGA3-210ENST00000580799 TDRD7Q8NHU6 1098 aaKnown RBP13.01□□□□□ -0.33
GGA3-210ENST00000580799 ZNF594Q96JF6 807 aaPredicted RBP13.01□□□□□ -0.33
GGA3-210ENST00000580799 SERPINA10Q9UK55 444 aa13.01□□□□□ -0.33
GGA3-210ENST00000580799 OTOFQ9HC10 1997 aa13.01□□□□□ -0.33
GGA3-210ENST00000580799 RBBP6Q7Z6E9 1792 aaKnown RBP13□□□□□ -0.33
GGA3-210ENST00000580799 USP2O75604 605 aaPredicted RBP13□□□□□ -0.33
GGA3-210ENST00000580799 HIBADHP31937 336 aaKnown RBP13□□□□□ -0.33
GGA3-210ENST00000580799 SPDYE2Q495Y8 402 aa13□□□□□ -0.33
GGA3-210ENST00000580799 INTS3Q68E01 1043 aaKnown RBP13□□□□□ -0.33
GGA3-210ENST00000580799 ERO1AQ96HE7 468 aa13□□□□□ -0.33
GGA3-210ENST00000580799 SRCIN1Q9C0H9 1055 aa13□□□□□ -0.33
GGA3-210ENST00000580799 SALL2Q9Y467 1007 aaPredicted RBP13□□□□□ -0.33
GGA3-210ENST00000580799 MROH5Q6ZUA9 1318 aa12.99□□□□□ -0.33
GGA3-210ENST00000580799 OTOP1Q7RTM1 612 aa12.99□□□□□ -0.33
GGA3-210ENST00000580799 FAM84BQ96KN1 310 aaPredicted RBP12.99□□□□□ -0.33
GGA3-210ENST00000580799 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.99□□□□□ -0.33
GGA3-210ENST00000580799 ZNF70Q9UC06 446 aaPredicted RBP12.99□□□□□ -0.33
GGA3-210ENST00000580799 TTF2Q9UNY4 1162 aaKnown RBP12.99□□□□□ -0.33
GGA3-210ENST00000580799 JAG2Q9Y219 1238 aa12.99□□□□□ -0.33
GGA3-210ENST00000580799 TRIM17Q9Y577 477 aa12.99□□□□□ -0.33
GGA3-210ENST00000580799 AOX1Q06278 1338 aa12.98□□□□□ -0.33
GGA3-210ENST00000580799 TESPA1A2RU30 521 aaPredicted RBP12.98□□□□□ -0.33
GGA3-210ENST00000580799 ANP32CO43423 234 aa12.98□□□□□ -0.33
GGA3-210ENST00000580799 GYG1P46976 350 aa12.98□□□□□ -0.33
GGA3-210ENST00000580799 TNNI2P48788 182 aa12.98□□□□□ -0.33
GGA3-210ENST00000580799 CRHR2Q13324 411 aa12.98□□□□□ -0.33
GGA3-210ENST00000580799 SLC4A10Q6U841 1118 aa12.98□□□□□ -0.33
GGA3-210ENST00000580799 SPINK5Q9NQ38 1064 aaPredicted RBP12.98□□□□□ -0.33
GGA3-210ENST00000580799 UTYO14607 1347 aa12.97□□□□□ -0.33
GGA3-210ENST00000580799 GJA5P36382 358 aa12.97□□□□□ -0.33
GGA3-210ENST00000580799 HDLBPQ00341 1268 aaKnown RBP12.97□□□□□ -0.33
GGA3-210ENST00000580799 DZIP1LQ8IYY4 767 aaKnown RBP12.97□□□□□ -0.33
GGA3-210ENST00000580799 OPTNQ96CV9 577 aa12.97□□□□□ -0.33
GGA3-210ENST00000580799 TDRD3Q9H7E2 651 aaKnown RBP12.97□□□□□ -0.33
GGA3-210ENST00000580799 PTPN22Q9Y2R2 807 aa12.97□□□□□ -0.33
GGA3-210ENST00000580799 RIPOR2Q9Y4F9 1068 aa12.97□□□□□ -0.33
GGA3-210ENST00000580799 CRKP46108 304 aa12.96□□□□□ -0.33
GGA3-210ENST00000580799 SP3Q02447 781 aa12.96□□□□□ -0.33
GGA3-210ENST00000580799 VPS37DQ86XT2 251 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms