RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 ZBED3Q96IU2 234 aaPredicted RBP26.76■■□□□ 1.87
CSNK1D-215ENST00000580784 NOB1Q9ULX3 412 aaKnown RBP26.76■■□□□ 1.87
CSNK1D-215ENST00000580784 MROH5Q6ZUA9 1318 aa26.75■■□□□ 1.87
CSNK1D-215ENST00000580784 GYG1P46976 350 aa26.75■■□□□ 1.87
CSNK1D-215ENST00000580784 KLHDC4Q8TBB5 520 aa26.75■■□□□ 1.87
CSNK1D-215ENST00000580784 CCDC102AQ96A19 550 aa26.75■■□□□ 1.87
CSNK1D-215ENST00000580784 FAM84BQ96KN1 310 aaPredicted RBP26.75■■□□□ 1.87
CSNK1D-215ENST00000580784 F8W031 263 aaPredicted RBP26.74■■□□□ 1.87
CSNK1D-215ENST00000580784 HIBADHP31937 336 aaKnown RBP26.73■■□□□ 1.87
CSNK1D-215ENST00000580784 DLGAP5Q15398 846 aa26.73■■□□□ 1.87
CSNK1D-215ENST00000580784 MOB2Q70IA6 237 aa26.73■■□□□ 1.87
CSNK1D-215ENST00000580784 TDRD7Q8NHU6 1098 aaKnown RBP26.73■■□□□ 1.87
CSNK1D-215ENST00000580784 PCDHAC2Q9Y5I4 1007 aa26.73■■□□□ 1.87
CSNK1D-215ENST00000580784 FKBP1AP62942 108 aaKnown RBP26.72■■□□□ 1.87
CSNK1D-215ENST00000580784 FKBP1BP68106 108 aa26.72■■□□□ 1.87
CSNK1D-215ENST00000580784 METTL24Q5JXM2 366 aa26.72■■□□□ 1.87
CSNK1D-215ENST00000580784 PAPPA2Q9BXP8 1791 aa26.71■■□□□ 1.87
CSNK1D-215ENST00000580784 FAM205AQ6ZU69 1335 aa26.71■■□□□ 1.87
CSNK1D-215ENST00000580784 KIF23Q02241 960 aaPredicted RBP26.71■■□□□ 1.87
CSNK1D-215ENST00000580784 CA12O43570 354 aa26.7■■□□□ 1.86
CSNK1D-215ENST00000580784 SLC10A3P09131 477 aa26.7■■□□□ 1.86
CSNK1D-215ENST00000580784 RARSP54136 660 aaKnown RBP26.7■■□□□ 1.86
CSNK1D-215ENST00000580784 APOBEC3FQ8IUX4 373 aaKnown RBP26.7■■□□□ 1.86
CSNK1D-215ENST00000580784 MTMR14Q8NCE2 650 aa26.7■■□□□ 1.86
CSNK1D-215ENST00000580784 UBE2Q2LH0YL09 131 aa26.69■■□□□ 1.86
CSNK1D-215ENST00000580784 PDE8BO95263 885 aa26.69■■□□□ 1.86
CSNK1D-215ENST00000580784 CFAP100Q494V2 611 aa26.69■■□□□ 1.86
CSNK1D-215ENST00000580784 VGLL2Q8N8G2 317 aa26.69■■□□□ 1.86
CSNK1D-215ENST00000580784 API5Q9BZZ5 524 aaKnown RBP26.69■■□□□ 1.86
CSNK1D-215ENST00000580784 ECM29Q5VYK3 1845 aa26.69■■□□□ 1.86
CSNK1D-215ENST00000580784 CASP8AP2Q9UKL3 1982 aa26.68■■□□□ 1.86
CSNK1D-215ENST00000580784 RFX5P48382 616 aaPredicted RBP26.68■■□□□ 1.86
CSNK1D-215ENST00000580784 FBXO33Q7Z6M2 555 aa26.68■■□□□ 1.86
CSNK1D-215ENST00000580784 MIER1Q8N108 512 aa26.68■■□□□ 1.86
CSNK1D-215ENST00000580784 PRMT6Q96LA8 375 aaPredicted RBP26.68■■□□□ 1.86
CSNK1D-215ENST00000580784 UBTFL1P0CB47 393 aaPredicted RBP26.67■■□□□ 1.86
CSNK1D-215ENST00000580784 TTLL12Q14166 644 aaPredicted RBP26.67■■□□□ 1.86
CSNK1D-215ENST00000580784 MFSD14BQ5SR56 506 aa26.67■■□□□ 1.86
CSNK1D-215ENST00000580784 IQSEC3Q9UPP2 1182 aaPredicted RBP26.67■■□□□ 1.86
CSNK1D-215ENST00000580784 SPDYE2BA6NHP3 402 aa26.66■■□□□ 1.86
CSNK1D-215ENST00000580784 SPDYE6P0CI01 402 aa26.66■■□□□ 1.86
CSNK1D-215ENST00000580784 NF2P35240 595 aa26.66■■□□□ 1.86
CSNK1D-215ENST00000580784 VPS37DQ86XT2 251 aa26.66■■□□□ 1.86
CSNK1D-215ENST00000580784 RASAL3Q86YV0 1011 aa26.66■■□□□ 1.86
CSNK1D-215ENST00000580784 AKAP11Q9UKA4 1901 aa26.66■■□□□ 1.86
CSNK1D-215ENST00000580784 RBM5P52756 815 aaKnown RBP eCLIP26.65■■□□□ 1.861e-8■■□□□ 12.4
CSNK1D-215ENST00000580784 PTPN12Q05209 780 aaKnown RBP26.65■■□□□ 1.86
CSNK1D-215ENST00000580784 CSRNP1Q96S65 589 aa26.65■■□□□ 1.86
CSNK1D-215ENST00000580784 DEFB129Q9H1M3 183 aa26.65■■□□□ 1.86
CSNK1D-215ENST00000580784 AOX1Q06278 1338 aa26.65■■□□□ 1.86
CSNK1D-215ENST00000580784 CLRN2A0PK11 232 aa26.64■■□□□ 1.86
CSNK1D-215ENST00000580784 EYA2O00167 538 aa26.64■■□□□ 1.86
CSNK1D-215ENST00000580784 PRKG1Q13976 671 aa26.64■■□□□ 1.86
CSNK1D-215ENST00000580784 CAVIN4Q5BKX8 364 aa26.64■■□□□ 1.86
CSNK1D-215ENST00000580784 TTF2Q9UNY4 1162 aaKnown RBP26.64■■□□□ 1.86
CSNK1D-215ENST00000580784 MYO1BO43795 1136 aa26.63■■□□□ 1.85
CSNK1D-215ENST00000580784 BCAMP50895 628 aa26.63■■□□□ 1.85
CSNK1D-215ENST00000580784 DIEXFQ68CQ4 756 aaKnown RBP26.63■■□□□ 1.85
CSNK1D-215ENST00000580784 FGFR2P21802 821 aa26.62■■□□□ 1.85
CSNK1D-215ENST00000580784 ARHGAP45Q92619 1136 aa26.62■■□□□ 1.85
CSNK1D-215ENST00000580784 LRRFIP2Q9Y608 721 aaKnown RBP26.62■■□□□ 1.85
CSNK1D-215ENST00000580784 ARAP2Q8WZ64 1704 aa26.62■■□□□ 1.85
CSNK1D-215ENST00000580784 FRAT2O75474 233 aaPredicted RBP26.61■■□□□ 1.85
CSNK1D-215ENST00000580784 CHAF1AQ13111 956 aaPredicted RBP26.61■■□□□ 1.85
CSNK1D-215ENST00000580784 PUM3Q15397 648 aaKnown RBP26.61■■□□□ 1.85
CSNK1D-215ENST00000580784 GRIK5Q16478 980 aa26.61■■□□□ 1.85
CSNK1D-215ENST00000580784 ATG9AQ7Z3C6 839 aa26.61■■□□□ 1.85
CSNK1D-215ENST00000580784 VEZTQ9HBM0 779 aa26.61■■□□□ 1.85
CSNK1D-215ENST00000580784 RNF186Q9NXI6 227 aa26.61■■□□□ 1.85
CSNK1D-215ENST00000580784 FZD1Q9UP38 647 aa26.61■■□□□ 1.85
CSNK1D-215ENST00000580784 KIF16BQ96L93 1317 aa26.61■■□□□ 1.85
CSNK1D-215ENST00000580784 TRPA1O75762 1119 aa26.6■■□□□ 1.85
CSNK1D-215ENST00000580784 ARMC9Q7Z3E5 817 aa26.6■■□□□ 1.85
CSNK1D-215ENST00000580784 MEIS3Q99687 375 aa26.6■■□□□ 1.85
CSNK1D-215ENST00000580784 SIL1Q9H173 461 aa26.6■■□□□ 1.85
CSNK1D-215ENST00000580784 SERPINA10Q9UK55 444 aa26.6■■□□□ 1.85
CSNK1D-215ENST00000580784 COL1A1P02452 1464 aaPredicted RBP26.6■■□□□ 1.85
CSNK1D-215ENST00000580784 IFIT1P09914 478 aaKnown RBP26.59■■□□□ 1.85
CSNK1D-215ENST00000580784 INTS3Q68E01 1043 aaKnown RBP26.59■■□□□ 1.85
CSNK1D-215ENST00000580784 ANGEL1Q9UNK9 670 aaKnown RBP26.59■■□□□ 1.85
CSNK1D-215ENST00000580784 BCAR3O75815 825 aa26.58■■□□□ 1.85
CSNK1D-215ENST00000580784 SAGE1Q9NXZ1 904 aa26.58■■□□□ 1.85
CSNK1D-215ENST00000580784 HDAC5Q9UQL6 1122 aa26.58■■□□□ 1.85
CSNK1D-215ENST00000580784 PPP2R3BQ9Y5P8 575 aa26.58■■□□□ 1.85
CSNK1D-215ENST00000580784 LDLRAD1Q5T700 205 aa26.57■■□□□ 1.84
CSNK1D-215ENST00000580784 REM2Q8IYK8 340 aaPredicted RBP26.57■■□□□ 1.84
CSNK1D-215ENST00000580784 ABHD8Q96I13 439 aa26.57■■□□□ 1.84
CSNK1D-215ENST00000580784 TDRD3Q9H7E2 651 aaKnown RBP26.57■■□□□ 1.84
CSNK1D-215ENST00000580784 ZNF70Q9UC06 446 aaPredicted RBP26.57■■□□□ 1.84
CSNK1D-215ENST00000580784 SLC5A1P13866 664 aa26.56■■□□□ 1.84
CSNK1D-215ENST00000580784 CRKP46108 304 aa26.56■■□□□ 1.84
CSNK1D-215ENST00000580784 HNRNPUQ00839 825 aaKnown RBP eCLIP26.56■■□□□ 1.84
CSNK1D-215ENST00000580784 RASA3Q14644 834 aa26.56■■□□□ 1.84
CSNK1D-215ENST00000580784 DZIP1LQ8IYY4 767 aaKnown RBP26.56■■□□□ 1.84
CSNK1D-215ENST00000580784 TBC1D22AQ8WUA7 517 aa26.56■■□□□ 1.84
CSNK1D-215ENST00000580784 LPIN2Q92539 896 aa26.56■■□□□ 1.84
CSNK1D-215ENST00000580784 TNNQ9UQP3 1299 aa26.56■■□□□ 1.84
CSNK1D-215ENST00000580784 SSC5DA1L4H1 1573 aa26.55■■□□□ 1.84
CSNK1D-215ENST00000580784 IPO8O15397 1037 aaKnown RBP26.55■■□□□ 1.84
CSNK1D-215ENST00000580784 CIAO1O76071 339 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms